RNA–Protein interactions for RNA: ENST00000424265.5

USP54-205, Transcript of ubiquitin specific peptidase 54, humanhuman

TSL 2

Gene USP54, Length 5,201 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP54-205ENST00000424265 LRRC75BQ2VPJ9 315 aa8.23□□□□□ -1.09
USP54-205ENST00000424265 LYZL2Q7Z4W2 148 aa8.23□□□□□ -1.09
USP54-205ENST00000424265 OR5AS1Q8N127 324 aa8.23□□□□□ -1.09
USP54-205ENST00000424265 OR13C6PQ8NH95 151 aa8.23□□□□□ -1.09
USP54-205ENST00000424265 PNRC2Q9NPJ4 139 aaKnown RBP8.23□□□□□ -1.09
USP54-205ENST00000424265 A0A1B0GWB2 263 aa8.23□□□□□ -1.09
USP54-205ENST00000424265 RBM11P57052 281 aaKnown RBP8.23□□□□□ -1.09
USP54-205ENST00000424265 BRICD5Q6PL45 260 aa8.23□□□□□ -1.09
USP54-205ENST00000424265 ZNF808Q8N4W9 903 aaPredicted RBP8.23□□□□□ -1.09
USP54-205ENST00000424265 OR2T6Q8NHC8 308 aa8.23□□□□□ -1.09
USP54-205ENST00000424265 MBD3L1Q8WWY6 194 aa8.23□□□□□ -1.09
USP54-205ENST00000424265 TMEM189A5PLL7 270 aa8.23□□□□□ -1.09
USP54-205ENST00000424265 CT45A6P0DMU7 189 aa8.23□□□□□ -1.09
USP54-205ENST00000424265 CT45A5P0DMU8 189 aa8.23□□□□□ -1.09
USP54-205ENST00000424265 CT45A7P0DMV0 189 aa8.23□□□□□ -1.09
USP54-205ENST00000424265 BLVRBP30043 206 aaPredicted RBP8.23□□□□□ -1.09
USP54-205ENST00000424265 OR8B8Q15620 311 aa8.23□□□□□ -1.09
USP54-205ENST00000424265 CT45A1Q5HYN5 189 aa8.23□□□□□ -1.09
USP54-205ENST00000424265 NEGR1Q7Z3B1 354 aa8.23□□□□□ -1.09
USP54-205ENST00000424265 FAM169BQ8N8A8 192 aa8.23□□□□□ -1.09
USP54-205ENST00000424265 CT45A3Q8NHU0 189 aa8.23□□□□□ -1.09
USP54-205ENST00000424265 C1QTNF4Q9BXJ3 329 aa8.23□□□□□ -1.09
USP54-205ENST00000424265 ZNF581Q9P0T4 197 aa8.23□□□□□ -1.09
USP54-205ENST00000424265 HS3ST1O14792 307 aa8.22□□□□□ -1.09
USP54-205ENST00000424265 APOMO95445 188 aa8.22□□□□□ -1.09
USP54-205ENST00000424265 GRPP07492 148 aa8.22□□□□□ -1.09
USP54-205ENST00000424265 FOXL1Q12952 345 aa8.22□□□□□ -1.09
USP54-205ENST00000424265 LINC00596Q86U02 117 aa8.22□□□□□ -1.09
USP54-205ENST00000424265 PTH2Q96A98 100 aa8.22□□□□□ -1.09
USP54-205ENST00000424265 NDFIP1Q9BT67 221 aa8.22□□□□□ -1.09
USP54-205ENST00000424265 TRAV9-1A0A075B6T8 112 aa8.22□□□□□ -1.09
USP54-205ENST00000424265 CT45A10P0DMU9 189 aa8.22□□□□□ -1.09
USP54-205ENST00000424265 TRAV1-1A0A0B4J248 108 aa8.22□□□□□ -1.09
USP54-205ENST00000424265 OR4C12Q96R67 309 aa8.22□□□□□ -1.09
USP54-205ENST00000424265 SLC25A22Q9H936 323 aa8.22□□□□□ -1.09
USP54-205ENST00000424265 PAGE4O60829 102 aa8.22□□□□□ -1.09
USP54-205ENST00000424265 COX6B1P14854 86 aa8.22□□□□□ -1.09
USP54-205ENST00000424265 KIR3DS1Q14943 382 aa8.22□□□□□ -1.09
USP54-205ENST00000424265 C8orf86Q6ZUL3 223 aa8.22□□□□□ -1.09
USP54-205ENST00000424265 TMEM252Q8N6L7 170 aa8.22□□□□□ -1.09
USP54-205ENST00000424265 CATR1Q13166 79 aa8.21□□□□□ -1.09
USP54-205ENST00000424265 OSR2Q8N2R0 312 aa8.21□□□□□ -1.09
USP54-205ENST00000424265 ZIC4Q8N9L1 334 aa8.21□□□□□ -1.09
USP54-205ENST00000424265 GGTLC1Q9BX51 225 aa8.21□□□□□ -1.09
USP54-205ENST00000424265 NECAP2Q9NVZ3 263 aa8.21□□□□□ -1.09
USP54-205ENST00000424265 MAP1BP46821 2468 aaKnown RBP8.21□□□□□ -1.09
USP54-205ENST00000424265 ADAM20O43506 726 aa8.21□□□□□ -1.09
USP54-205ENST00000424265 SYNGR1O43759 233 aa8.21□□□□□ -1.09
USP54-205ENST00000424265 SNCGO76070 127 aa8.21□□□□□ -1.09
USP54-205ENST00000424265 A0A1W2PPM0 123 aa8.21□□□□□ -1.1
USP54-205ENST00000424265 TNFAIP6P98066 277 aaPredicted RBP8.21□□□□□ -1.1
USP54-205ENST00000424265 PLPPR1Q8TBJ4 325 aa8.21□□□□□ -1.1
USP54-205ENST00000424265 OR8B2Q96RD0 313 aa8.21□□□□□ -1.1
USP54-205ENST00000424265 CLEC7AQ9BXN2 247 aa8.21□□□□□ -1.1
USP54-205ENST00000424265 KCNIP2Q9NS61 270 aa8.21□□□□□ -1.1
USP54-205ENST00000424265 A0A1W2PS18 150 aa8.21□□□□□ -1.1
USP54-205ENST00000424265 FAM181BA6NEQ2 426 aa8.21□□□□□ -1.1
USP54-205ENST00000424265 NPIPB5A8MRT5 1133 aa8.21□□□□□ -1.1
USP54-205ENST00000424265 J3QT63 122 aa8.21□□□□□ -1.1
USP54-205ENST00000424265 SPINT2O43291 252 aa8.21□□□□□ -1.1
USP54-205ENST00000424265 CLDN14O95500 239 aa8.21□□□□□ -1.1
USP54-205ENST00000424265 KISS1Q15726 138 aa8.21□□□□□ -1.1
USP54-205ENST00000424265 SPATA31B1PQ5VZV4 182 aa8.21□□□□□ -1.1
USP54-205ENST00000424265 OTPQ5XKR4 325 aa8.21□□□□□ -1.1
USP54-205ENST00000424265 LIAT1Q6ZQX7 453 aa8.21□□□□□ -1.1
USP54-205ENST00000424265 OR4A16Q8NH70 328 aa8.21□□□□□ -1.1
USP54-205ENST00000424265 SPATA25Q9BR10 227 aa8.21□□□□□ -1.1
USP54-205ENST00000424265 ACACAQ13085 2346 aa8.21□□□□□ -1.1
USP54-205ENST00000424265 PATE4P0C8F1 98 aa8.2□□□□□ -1.1
USP54-205ENST00000424265 OR3A4PP47883 348 aa8.2□□□□□ -1.1
USP54-205ENST00000424265 HES1Q14469 280 aa8.2□□□□□ -1.1
USP54-205ENST00000424265 C3orf80F5H4A9 247 aa8.2□□□□□ -1.1
USP54-205ENST00000424265 SUPT4H1P63272 117 aaKnown RBP8.2□□□□□ -1.1
USP54-205ENST00000424265 FOXL2NBQ6ZUU3 175 aa8.2□□□□□ -1.1
USP54-205ENST00000424265 TRAV25A0A0B4J276 109 aa8.2□□□□□ -1.1
USP54-205ENST00000424265 H3BP45 60 aa8.2□□□□□ -1.1
USP54-205ENST00000424265 GLRXP35754 106 aa8.2□□□□□ -1.1
USP54-205ENST00000424265 POU2AF1Q16633 256 aa8.2□□□□□ -1.1
USP54-205ENST00000424265 C3orf36Q3SXR2 165 aa8.2□□□□□ -1.1
USP54-205ENST00000424265 PRR31Q5SQ13 230 aa8.2□□□□□ -1.1
USP54-205ENST00000424265 TPRX1Q8N7U7 411 aa8.2□□□□□ -1.1
USP54-205ENST00000424265 RPRMQ9NS64 109 aa8.2□□□□□ -1.1
USP54-205ENST00000424265 CRYM-AS1A6NIL9 109 aa8.19□□□□□ -1.1
USP54-205ENST00000424265 HLA-DQA1P01909 254 aa8.19□□□□□ -1.1
USP54-205ENST00000424265 OR5D13Q8NGL4 314 aa8.19□□□□□ -1.1
USP54-205ENST00000424265 NUP210LQ5VU65 1888 aa8.19□□□□□ -1.1
USP54-205ENST00000424265 TRGV10A0A0A0MS01 117 aa8.19□□□□□ -1.1
USP54-205ENST00000424265 hDV102S1A0JD36 115 aa8.19□□□□□ -1.1
USP54-205ENST00000424265 F8W1H4 67 aa8.19□□□□□ -1.1
USP54-205ENST00000424265 SYNGR3O43761 229 aa8.19□□□□□ -1.1
USP54-205ENST00000424265 IGHV1-2P23083 117 aa8.19□□□□□ -1.1
USP54-205ENST00000424265 YPEL3P61236 119 aaPredicted RBP8.19□□□□□ -1.1
USP54-205ENST00000424265 LY6DQ14210 128 aa8.19□□□□□ -1.1
USP54-205ENST00000424265 SPATA46Q5T0L3 261 aa8.19□□□□□ -1.1
USP54-205ENST00000424265 IL36BQ9NZH7 164 aa8.19□□□□□ -1.1
USP54-205ENST00000424265 HLA-DRB1P01911 266 aa8.19□□□□□ -1.1
USP54-205ENST00000424265 REG1AP05451 166 aa8.19□□□□□ -1.1
USP54-205ENST00000424265 COX5AP20674 150 aa8.19□□□□□ -1.1
USP54-205ENST00000424265 KIR2DL2P43627 348 aaPredicted RBP8.19□□□□□ -1.1
USP54-205ENST00000424265 TTC9CQ8N5M4 171 aa8.19□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms