RNA–Protein interactions for RNA: ENST00000420646.6

SNCA-206, Transcript of synuclein alpha, humanhuman

TSL 2 BASIC

Gene SNCA, Length 3,127 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-206ENST00000420646 ST6GALNAC6Q969X2 333 aa7.12□□□□□ -1.27
SNCA-206ENST00000420646 DERL1Q9BUN8 251 aa7.12□□□□□ -1.27
SNCA-206ENST00000420646 CTXND1A0A1B0GTU2 59 aa7.12□□□□□ -1.27
SNCA-206ENST00000420646 PGPEP1LA6NFU8 196 aa7.12□□□□□ -1.27
SNCA-206ENST00000420646 C22orf46C9J442 243 aa7.12□□□□□ -1.27
SNCA-206ENST00000420646 C19orf84I3L1E1 186 aa7.12□□□□□ -1.27
SNCA-206ENST00000420646 FABP1P07148 127 aa7.12□□□□□ -1.27
SNCA-206ENST00000420646 ATP5G3P48201 142 aa7.12□□□□□ -1.27
SNCA-206ENST00000420646 SSBP2P81877 361 aaPredicted RBP7.12□□□□□ -1.27
SNCA-206ENST00000420646 MEF2BQ02080 365 aaPredicted RBP7.12□□□□□ -1.27
SNCA-206ENST00000420646 FBXL19-AS1Q494R0 122 aa7.12□□□□□ -1.27
SNCA-206ENST00000420646 CST9LP1Q5W188 147 aa7.12□□□□□ -1.27
SNCA-206ENST00000420646 OR9G1Q8NH87 305 aa7.12□□□□□ -1.27
SNCA-206ENST00000420646 FAM216AQ8WUB2 273 aa7.12□□□□□ -1.27
SNCA-206ENST00000420646 ADTRPQ96IZ2 230 aa7.12□□□□□ -1.27
SNCA-206ENST00000420646 ACTR3CQ9C0K3 210 aaPredicted RBP7.12□□□□□ -1.27
SNCA-206ENST00000420646 ZNF430Q9H8G1 570 aaPredicted RBP7.12□□□□□ -1.27
SNCA-206ENST00000420646 ONECUT1Q9UBC0 465 aa7.12□□□□□ -1.27
SNCA-206ENST00000420646 VAX2Q9UIW0 290 aa7.12□□□□□ -1.27
SNCA-206ENST00000420646 TGIF2-C20orf24A0A0A6YYL0 155 aa7.11□□□□□ -1.27
SNCA-206ENST00000420646 PPIAL4CA0A0B4J2A2 164 aa7.11□□□□□ -1.27
SNCA-206ENST00000420646 CGB1A6NKQ9 187 aa7.11□□□□□ -1.27
SNCA-206ENST00000420646 FAM90A9PA6NNJ1 464 aa7.11□□□□□ -1.27
SNCA-206ENST00000420646 APOA2P02652 100 aa7.11□□□□□ -1.27
SNCA-206ENST00000420646 IL6RP08887 468 aaPredicted RBP7.11□□□□□ -1.27
SNCA-206ENST00000420646 RD3LP0DJH9 198 aa7.11□□□□□ -1.27
SNCA-206ENST00000420646 PPIAL4GP0DN37 164 aa7.11□□□□□ -1.27
SNCA-206ENST00000420646 GNLYP22749 145 aa7.11□□□□□ -1.27
SNCA-206ENST00000420646 NPPCP23582 126 aa7.11□□□□□ -1.27
SNCA-206ENST00000420646 WT1-ASQ06250 92 aa7.11□□□□□ -1.27
SNCA-206ENST00000420646 HABP2Q14520 560 aaPredicted RBP7.11□□□□□ -1.27
SNCA-206ENST00000420646 HCP5Q6MZN7 132 aa7.11□□□□□ -1.27
SNCA-206ENST00000420646 PNKDQ8N490 385 aa7.11□□□□□ -1.27
SNCA-206ENST00000420646 OR10A7Q8NGE5 316 aa7.11□□□□□ -1.27
SNCA-206ENST00000420646 PARD6GQ9BYG4 376 aaPredicted RBP7.11□□□□□ -1.27
SNCA-206ENST00000420646 COMMD5Q9GZQ3 224 aa7.11□□□□□ -1.27
SNCA-206ENST00000420646 TMEM133Q9H2Q1 129 aa7.11□□□□□ -1.27
SNCA-206ENST00000420646 KAAG1Q9UBP8 84 aa7.11□□□□□ -1.27
SNCA-206ENST00000420646 TIMM9Q9Y5J7 89 aa7.11□□□□□ -1.27
SNCA-206ENST00000420646 IGHV2-26A0A0B4J1V2 119 aa7.11□□□□□ -1.27
SNCA-206ENST00000420646 A0A1W2PPV4 95 aa7.11□□□□□ -1.27
SNCA-206ENST00000420646 CXCL1P09341 107 aa7.11□□□□□ -1.27
SNCA-206ENST00000420646 ARL14EPLP0DKL9 152 aa7.11□□□□□ -1.27
SNCA-206ENST00000420646 RPL8P62917 257 aaKnown RBP7.11□□□□□ -1.27
SNCA-206ENST00000420646 PRCDQ00LT1 54 aa7.11□□□□□ -1.27
SNCA-206ENST00000420646 KLRD1Q13241 179 aa7.11□□□□□ -1.27
SNCA-206ENST00000420646 STPG3Q8N7X2 389 aa7.11□□□□□ -1.27
SNCA-206ENST00000420646 NECAP1Q8NC96 275 aa7.11□□□□□ -1.27
SNCA-206ENST00000420646 TVP23CQ96ET8 276 aa7.11□□□□□ -1.27
SNCA-206ENST00000420646 ACY3Q96HD9 319 aa7.11□□□□□ -1.27
SNCA-206ENST00000420646 NPVFQ9HCQ7 196 aa7.11□□□□□ -1.27
SNCA-206ENST00000420646 GSN-AS1Q9NRJ2 163 aa7.11□□□□□ -1.27
SNCA-206ENST00000420646 C17orf112F2Z3M2 114 aa7.1□□□□□ -1.27
SNCA-206ENST00000420646 IGLV2-23P01705 113 aa7.1□□□□□ -1.27
SNCA-206ENST00000420646 IGHV2-70P01814 119 aa7.1□□□□□ -1.27
SNCA-206ENST00000420646 PPOXP50336 477 aa7.1□□□□□ -1.27
SNCA-206ENST00000420646 GNB1P62873 340 aa7.1□□□□□ -1.27
SNCA-206ENST00000420646 FBLN7Q53RD9 439 aa7.1□□□□□ -1.27
SNCA-206ENST00000420646 WDR25Q64LD2 544 aaPredicted RBP7.1□□□□□ -1.27
SNCA-206ENST00000420646 RBMS3Q6XE24 437 aaKnown RBP7.1□□□□□ -1.27
SNCA-206ENST00000420646 SLC35E3Q7Z769 313 aa7.1□□□□□ -1.27
SNCA-206ENST00000420646 Q8WTZ3 238 aa7.1□□□□□ -1.27
SNCA-206ENST00000420646 SMIM7Q9BQ49 75 aa7.1□□□□□ -1.27
SNCA-206ENST00000420646 MRPL36Q9P0J6 103 aaKnown RBP7.1□□□□□ -1.27
SNCA-206ENST00000420646 PRNDQ9UKY0 176 aa7.1□□□□□ -1.27
SNCA-206ENST00000420646 HILPDAQ9Y5L2 63 aa7.1□□□□□ -1.27
SNCA-206ENST00000420646 CYB5BO43169 146 aa7.1□□□□□ -1.27
SNCA-206ENST00000420646 HNF1AP20823 631 aa7.1□□□□□ -1.27
SNCA-206ENST00000420646 SNRPEP62304 92 aaKnown RBP7.1□□□□□ -1.27
SNCA-206ENST00000420646 RPP30P78346 268 aaKnown RBP7.1□□□□□ -1.27
SNCA-206ENST00000420646 GAMTQ14353 236 aa7.1□□□□□ -1.27
SNCA-206ENST00000420646 RHEBQ15382 184 aa7.1□□□□□ -1.27
SNCA-206ENST00000420646 ADIRFQ15847 76 aa7.1□□□□□ -1.27
SNCA-206ENST00000420646 POU2AF1Q16633 256 aa7.1□□□□□ -1.27
SNCA-206ENST00000420646 TEPPQ6URK8 271 aa7.1□□□□□ -1.27
SNCA-206ENST00000420646 OR4C13Q8NGP0 309 aa7.1□□□□□ -1.27
SNCA-206ENST00000420646 LSM4Q9Y4Z0 139 aaKnown RBP7.1□□□□□ -1.27
SNCA-206ENST00000420646 RAB5AP20339 215 aa7.1□□□□□ -1.27
SNCA-206ENST00000420646 PSMB3P49720 205 aa7.1□□□□□ -1.27
SNCA-206ENST00000420646 ACOT6Q3I5F7 207 aaPredicted RBP7.1□□□□□ -1.27
SNCA-206ENST00000420646 C15orf54Q8N8G6 183 aa7.1□□□□□ -1.27
SNCA-206ENST00000420646 SMDT1Q9H4I9 107 aa7.1□□□□□ -1.27
SNCA-206ENST00000420646 SETD2Q9BYW2 2564 aaPredicted RBP7.09□□□□□ -1.27
SNCA-206ENST00000420646 FBN2P35556 2912 aa7.09□□□□□ -1.27
SNCA-206ENST00000420646 C11orf94C9JXX5 98 aa7.09□□□□□ -1.27
SNCA-206ENST00000420646 RNASE2P10153 161 aaKnown RBP7.09□□□□□ -1.27
SNCA-206ENST00000420646 RPS10P46783 165 aaKnown RBP7.09□□□□□ -1.27
SNCA-206ENST00000420646 MRGPRG-AS1Q2M3A8 158 aa7.09□□□□□ -1.27
SNCA-206ENST00000420646 MIR17HGQ75NE6 70 aa7.09□□□□□ -1.27
SNCA-206ENST00000420646 SSX8Q7RTT4 187 aa7.09□□□□□ -1.27
SNCA-206ENST00000420646 OSR1Q8TAX0 266 aaPredicted RBP7.09□□□□□ -1.27
SNCA-206ENST00000420646 TMEM186Q96B77 213 aa7.09□□□□□ -1.27
SNCA-206ENST00000420646 PARLQ9H300 379 aa7.09□□□□□ -1.27
SNCA-206ENST00000420646 FNDC4Q9H6D8 234 aaPredicted RBP7.09□□□□□ -1.27
SNCA-206ENST00000420646 NDUFA4L2Q9NRX3 87 aa7.09□□□□□ -1.27
SNCA-206ENST00000420646 BET1LQ9NYM9 111 aa7.09□□□□□ -1.27
SNCA-206ENST00000420646 DOK5Q9P104 306 aa7.09□□□□□ -1.27
SNCA-206ENST00000420646 INSIG2Q9Y5U4 225 aa7.09□□□□□ -1.27
SNCA-206ENST00000420646 FCN1O00602 326 aa7.09□□□□□ -1.27
SNCA-206ENST00000420646 MBP02144 154 aa7.09□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms