RNA–Protein interactions for RNA: ENST00000418436.5

RFC1-203, Transcript of replication factor C subunit 1, humanhuman

TSL 1 (best)

Gene RFC1, Length 1,255 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-203ENST00000418436 LHFPL5Q8TAF8 219 aa8.09□□□□□ -1.11
RFC1-203ENST00000418436 TMEM56Q96MV1 263 aa8.09□□□□□ -1.11
RFC1-203ENST00000418436 SLC25A21Q9BQT8 299 aaPredicted RBP8.09□□□□□ -1.11
RFC1-203ENST00000418436 RANGRFQ9HD47 186 aaPredicted RBP8.09□□□□□ -1.11
RFC1-203ENST00000418436 BATF3Q9NR55 127 aa8.09□□□□□ -1.11
RFC1-203ENST00000418436 TMEM56-RWDD3S4R434 201 aa8.09□□□□□ -1.11
RFC1-203ENST00000418436 NOTCH3Q9UM47 2321 aa8.09□□□□□ -1.11
RFC1-203ENST00000418436 DNAH3Q8TD57 4116 aa8.08□□□□□ -1.12
RFC1-203ENST00000418436 A0A0G2JRQ6 117 aa8.08□□□□□ -1.12
RFC1-203ENST00000418436 OR2J3O76001 311 aa8.08□□□□□ -1.12
RFC1-203ENST00000418436 REG1AP05451 166 aa8.08□□□□□ -1.12
RFC1-203ENST00000418436 HIST1H1BP16401 226 aaKnown RBP8.08□□□□□ -1.12
RFC1-203ENST00000418436 AKR1C2P52895 323 aa8.08□□□□□ -1.12
RFC1-203ENST00000418436 SLURP1P55000 103 aa8.08□□□□□ -1.12
RFC1-203ENST00000418436 RAB25P57735 213 aa8.08□□□□□ -1.12
RFC1-203ENST00000418436 HSPE1P61604 102 aaKnown RBP8.08□□□□□ -1.12
RFC1-203ENST00000418436 ATP5G2Q06055 141 aa8.08□□□□□ -1.12
RFC1-203ENST00000418436 TMEM187Q14656 261 aa8.08□□□□□ -1.12
RFC1-203ENST00000418436 IZUMO4Q1ZYL8 232 aa8.08□□□□□ -1.12
RFC1-203ENST00000418436 SELENOHQ8IZQ5 122 aaKnown RBP8.08□□□□□ -1.12
RFC1-203ENST00000418436 DCUN1D4Q92564 292 aa8.08□□□□□ -1.12
RFC1-203ENST00000418436 DLX4Q92988 240 aaPredicted RBP8.08□□□□□ -1.12
RFC1-203ENST00000418436 RBPMSQ93062 196 aaKnown RBP8.08□□□□□ -1.12
RFC1-203ENST00000418436 IL22RA2Q969J5 263 aa8.08□□□□□ -1.12
RFC1-203ENST00000418436 LSM10Q969L4 123 aaKnown RBP8.08□□□□□ -1.12
RFC1-203ENST00000418436 GPR61Q9BZJ8 451 aa8.08□□□□□ -1.12
RFC1-203ENST00000418436 PEF1Q9UBV8 284 aaKnown RBP8.08□□□□□ -1.12
RFC1-203ENST00000418436 FBXL7Q9UJT9 491 aa8.08□□□□□ -1.12
RFC1-203ENST00000418436 KCNIP3Q9Y2W7 256 aa8.08□□□□□ -1.12
RFC1-203ENST00000418436 DMRT1Q9Y5R6 373 aa8.08□□□□□ -1.12
RFC1-203ENST00000418436 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP8.07□□□□□ -1.12
RFC1-203ENST00000418436 ANKRD34BA5PLL1 514 aa8.07□□□□□ -1.12
RFC1-203ENST00000418436 NDUFB8O95169 186 aa8.07□□□□□ -1.12
RFC1-203ENST00000418436 TRBV12-3P01733 135 aa8.07□□□□□ -1.12
RFC1-203ENST00000418436 OR13C7P0DN81 318 aa8.07□□□□□ -1.12
RFC1-203ENST00000418436 DEFA4P12838 97 aa8.07□□□□□ -1.12
RFC1-203ENST00000418436 AKR1C4P17516 323 aa8.07□□□□□ -1.12
RFC1-203ENST00000418436 INPP1P49441 399 aa8.07□□□□□ -1.12
RFC1-203ENST00000418436 PRCDQ00LT1 54 aa8.07□□□□□ -1.12
RFC1-203ENST00000418436 EGFEM1PQ0D2K5 195 aa8.07□□□□□ -1.12
RFC1-203ENST00000418436 EXOSC2Q13868 293 aaKnown RBP8.07□□□□□ -1.12
RFC1-203ENST00000418436 RBMS2Q15434 407 aaKnown RBP8.07□□□□□ -1.12
RFC1-203ENST00000418436 C15orf32Q32M92 178 aa8.07□□□□□ -1.12
RFC1-203ENST00000418436 AARDQ4LEZ3 155 aa8.07□□□□□ -1.12
RFC1-203ENST00000418436 TMEM128Q5BJH2 165 aa8.07□□□□□ -1.12
RFC1-203ENST00000418436 FAM209BQ5JX69 171 aa8.07□□□□□ -1.12
RFC1-203ENST00000418436 Q6ZRM9 215 aa8.07□□□□□ -1.12
RFC1-203ENST00000418436 FAM219AQ8IW50 185 aa8.07□□□□□ -1.12
RFC1-203ENST00000418436 RRNAD1Q96FB5 475 aaKnown RBP8.07□□□□□ -1.12
RFC1-203ENST00000418436 C7orf50Q9BRJ6 194 aaKnown RBP8.07□□□□□ -1.12
RFC1-203ENST00000418436 HINT2Q9BX68 163 aa8.07□□□□□ -1.12
RFC1-203ENST00000418436 PTTG2Q9NZH5 202 aa8.07□□□□□ -1.12
RFC1-203ENST00000418436 INS-IGF2F8WCM5 200 aa8.06□□□□□ -1.12
RFC1-203ENST00000418436 OVOL1O14753 267 aa8.06□□□□□ -1.12
RFC1-203ENST00000418436 PLA2G10O15496 165 aa8.06□□□□□ -1.12
RFC1-203ENST00000418436 ST8SIA3O43173 380 aa8.06□□□□□ -1.12
RFC1-203ENST00000418436 NDUFB6O95139 128 aa8.06□□□□□ -1.12
RFC1-203ENST00000418436 ZP3P21754 424 aa8.06□□□□□ -1.12
RFC1-203ENST00000418436 HOXD3P31249 432 aaPredicted RBP8.06□□□□□ -1.12
RFC1-203ENST00000418436 BTCP35070 178 aa8.06□□□□□ -1.12
RFC1-203ENST00000418436 CCR6P51684 374 aa8.06□□□□□ -1.12
RFC1-203ENST00000418436 MFAP2P55001 183 aa8.06□□□□□ -1.12
RFC1-203ENST00000418436 KLF5Q13887 457 aaPredicted RBP8.06□□□□□ -1.12
RFC1-203ENST00000418436 C9orf66Q5T8R8 295 aa8.06□□□□□ -1.12
RFC1-203ENST00000418436 TMEM268Q5VZI3 342 aa8.06□□□□□ -1.12
RFC1-203ENST00000418436 OR2C3Q8N628 320 aa8.06□□□□□ -1.12
RFC1-203ENST00000418436 ZNF114Q8NC26 417 aa8.06□□□□□ -1.12
RFC1-203ENST00000418436 S100ZQ8WXG8 99 aa8.06□□□□□ -1.12
RFC1-203ENST00000418436 CCDC32Q9BV29 185 aa8.06□□□□□ -1.12
RFC1-203ENST00000418436 F11RQ9Y624 299 aaKnown RBP8.06□□□□□ -1.12
RFC1-203ENST00000418436 A0A0B4J2A0 478 aa8.05□□□□□ -1.12
RFC1-203ENST00000418436 CENPXA8MT69 81 aa8.05□□□□□ -1.12
RFC1-203ENST00000418436 SEC14L6B5MCN3 397 aa8.05□□□□□ -1.12
RFC1-203ENST00000418436 BMPR1BO00238 502 aa8.05□□□□□ -1.12
RFC1-203ENST00000418436 ANXA3P12429 323 aa8.05□□□□□ -1.12
RFC1-203ENST00000418436 INSL3P51460 131 aa8.05□□□□□ -1.12
RFC1-203ENST00000418436 KRTAP10-11P60412 298 aa8.05□□□□□ -1.12
RFC1-203ENST00000418436 SRPXP78539 464 aa8.05□□□□□ -1.12
RFC1-203ENST00000418436 PDLIM3Q53GG5 364 aaPredicted RBP8.05□□□□□ -1.12
RFC1-203ENST00000418436 ACSM6Q6P461 480 aa8.05□□□□□ -1.12
RFC1-203ENST00000418436 TMED4Q7Z7H5 227 aa8.05□□□□□ -1.12
RFC1-203ENST00000418436 SLC35G3Q8N808 338 aa8.05□□□□□ -1.12
RFC1-203ENST00000418436 LRTM2Q8N967 370 aa8.05□□□□□ -1.12
RFC1-203ENST00000418436 OR1L6Q8NGR2 347 aa8.05□□□□□ -1.12
RFC1-203ENST00000418436 OR52E5Q8NH55 327 aa8.05□□□□□ -1.12
RFC1-203ENST00000418436 VN1R17PQ8TDU5 208 aa8.05□□□□□ -1.12
RFC1-203ENST00000418436 GPR146Q96CH1 333 aa8.05□□□□□ -1.12
RFC1-203ENST00000418436 CXorf58Q96LI9 332 aa8.05□□□□□ -1.12
RFC1-203ENST00000418436 CCDC140Q96MF4 163 aa8.05□□□□□ -1.12
RFC1-203ENST00000418436 CTNNBIP1Q9NSA3 81 aaPredicted RBP8.05□□□□□ -1.12
RFC1-203ENST00000418436 PRR13Q9NZ81 148 aa8.05□□□□□ -1.12
RFC1-203ENST00000418436 THYN1Q9P016 225 aa8.05□□□□□ -1.12
RFC1-203ENST00000418436 SHPKQ9UHJ6 478 aa8.05□□□□□ -1.12
RFC1-203ENST00000418436 TRBV7-1A0A0A6YYK4 115 aa8.04□□□□□ -1.12
RFC1-203ENST00000418436 LINC00854A0A1B0GVQ3 168 aa8.04□□□□□ -1.12
RFC1-203ENST00000418436 MFSD2BA6NFX1 497 aa8.04□□□□□ -1.12
RFC1-203ENST00000418436 CYB5BO43169 146 aa8.04□□□□□ -1.12
RFC1-203ENST00000418436 MECP2P51608 486 aaKnown RBP8.04□□□□□ -1.12
RFC1-203ENST00000418436 UBE2MP61081 183 aaKnown RBP8.04□□□□□ -1.12
RFC1-203ENST00000418436 NMSQ5H8A3 153 aa8.04□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms