RNA–Protein interactions for RNA: ENST00000418310.5

LIMK1-202, Transcript of LIM domain kinase 1, humanhuman

TSL 5 BASIC

Gene LIMK1, Length 3,360 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1-202ENST00000418310 CMTM2Q8TAZ6 248 aa9.74□□□□□ -0.85
LIMK1-202ENST00000418310 ZCCHC14Q8WYQ9 949 aaKnown RBP9.74□□□□□ -0.85
LIMK1-202ENST00000418310 UHRF2Q96PU4 802 aa9.74□□□□□ -0.85
LIMK1-202ENST00000418310 MRPL18Q9H0U6 180 aaKnown RBP9.74□□□□□ -0.85
LIMK1-202ENST00000418310 PARD6AQ9NPB6 346 aa9.74□□□□□ -0.85
LIMK1-202ENST00000418310 RPH3ALQ9UNE2 315 aa9.74□□□□□ -0.85
LIMK1-202ENST00000418310 IGHV3-72A0A0B4J1Y9 119 aa9.74□□□□□ -0.85
LIMK1-202ENST00000418310 C1orf162Q8NEQ5 155 aaPredicted RBP9.74□□□□□ -0.85
LIMK1-202ENST00000418310 OR2T6Q8NHC8 308 aa9.74□□□□□ -0.85
LIMK1-202ENST00000418310 TBX15Q96SF7 602 aa9.74□□□□□ -0.85
LIMK1-202ENST00000418310 SAMD10Q9BYL1 202 aa9.74□□□□□ -0.85
LIMK1-202ENST00000418310 TLN1Q9Y490 2541 aaKnown RBP9.74□□□□□ -0.85
LIMK1-202ENST00000418310 DIAPH2-AS1Q14236 149 aa9.74□□□□□ -0.85
LIMK1-202ENST00000418310 MORN5Q5VZ52 161 aa9.74□□□□□ -0.85
LIMK1-202ENST00000418310 ZNF705AQ6ZN79 300 aaPredicted RBP9.74□□□□□ -0.85
LIMK1-202ENST00000418310 DIRC2Q96SL1 478 aa9.74□□□□□ -0.85
LIMK1-202ENST00000418310 SSBP3Q9BWW4 388 aaPredicted RBP9.74□□□□□ -0.85
LIMK1-202ENST00000418310 ASCL3Q9NQ33 180 aa9.74□□□□□ -0.85
LIMK1-202ENST00000418310 RNF7Q9UBF6 113 aa9.74□□□□□ -0.85
LIMK1-202ENST00000418310 ZNF891A8MT65 544 aaPredicted RBP9.73□□□□□ -0.85
LIMK1-202ENST00000418310 MPDU1O75352 247 aa9.73□□□□□ -0.85
LIMK1-202ENST00000418310 SERF1AO75920 110 aa9.73□□□□□ -0.85
LIMK1-202ENST00000418310 SSBP2P81877 361 aaPredicted RBP9.73□□□□□ -0.85
LIMK1-202ENST00000418310 ZADH2Q8N4Q0 377 aa9.73□□□□□ -0.85
LIMK1-202ENST00000418310 PAM16Q9Y3D7 125 aa9.73□□□□□ -0.85
LIMK1-202ENST00000418310 F2RL2O00254 374 aa9.73□□□□□ -0.85
LIMK1-202ENST00000418310 IGHV1-46P01743 117 aa9.73□□□□□ -0.85
LIMK1-202ENST00000418310 CRISP2P16562 243 aa9.73□□□□□ -0.85
LIMK1-202ENST00000418310 GNG4P50150 75 aa9.73□□□□□ -0.85
LIMK1-202ENST00000418310 LGALS4P56470 323 aa9.73□□□□□ -0.85
LIMK1-202ENST00000418310 MZT1Q08AG7 82 aa9.73□□□□□ -0.85
LIMK1-202ENST00000418310 PRR27Q6MZM9 219 aa9.73□□□□□ -0.85
LIMK1-202ENST00000418310 C19orf35Q6ZS72 473 aa9.73□□□□□ -0.85
LIMK1-202ENST00000418310 TMEM144Q7Z5S9 345 aa9.73□□□□□ -0.85
LIMK1-202ENST00000418310 DDB2Q92466 427 aa9.73□□□□□ -0.85
LIMK1-202ENST00000418310 HSPB9Q9BQS6 159 aa9.73□□□□□ -0.85
LIMK1-202ENST00000418310 FAM215AQ9Y5M1 114 aa9.73□□□□□ -0.85
LIMK1-202ENST00000418310 SAA1P0DJI8 122 aaPredicted RBP9.72□□□□□ -0.85
LIMK1-202ENST00000418310 SELENOVP59797 346 aa9.72□□□□□ -0.85
LIMK1-202ENST00000418310 IQCJQ1A5X6 159 aa9.72□□□□□ -0.85
LIMK1-202ENST00000418310 MMD2Q8IY49 270 aa9.72□□□□□ -0.85
LIMK1-202ENST00000418310 CCL17Q92583 94 aa9.72□□□□□ -0.85
LIMK1-202ENST00000418310 RAB1CQ92928 201 aa9.72□□□□□ -0.85
LIMK1-202ENST00000418310 EAF1Q96JC9 268 aaPredicted RBP9.72□□□□□ -0.85
LIMK1-202ENST00000418310 MRPL20Q9BYC9 149 aaKnown RBP9.72□□□□□ -0.85
LIMK1-202ENST00000418310 LSM4Q9Y4Z0 139 aaKnown RBP9.72□□□□□ -0.85
LIMK1-202ENST00000418310 LRBAP50851 2863 aa9.72□□□□□ -0.85
LIMK1-202ENST00000418310 CACNA1BQ00975 2339 aa9.72□□□□□ -0.85
LIMK1-202ENST00000418310 TRAV34A0A0B4J273 112 aa9.72□□□□□ -0.85
LIMK1-202ENST00000418310 E7EUB6 86 aa9.72□□□□□ -0.85
LIMK1-202ENST00000418310 H3BTX0 84 aa9.72□□□□□ -0.85
LIMK1-202ENST00000418310 CDKN1AP38936 164 aa9.72□□□□□ -0.85
LIMK1-202ENST00000418310 RAB7AP51149 207 aa9.72□□□□□ -0.85
LIMK1-202ENST00000418310 LCN2P80188 198 aa9.72□□□□□ -0.85
LIMK1-202ENST00000418310 VN1R17PQ8TDU5 208 aa9.72□□□□□ -0.85
LIMK1-202ENST00000418310 HARBI1Q96MB7 349 aa9.72□□□□□ -0.85
LIMK1-202ENST00000418310 NAT8BQ9UHF3 227 aa9.72□□□□□ -0.85
LIMK1-202ENST00000418310 POLR3KQ9Y2Y1 108 aaPredicted RBP9.72□□□□□ -0.85
LIMK1-202ENST00000418310 ZNF292O60281 2723 aa9.72□□□□□ -0.85
LIMK1-202ENST00000418310 HELTA6NFD8 242 aa9.72□□□□□ -0.85
LIMK1-202ENST00000418310 GCGP01275 180 aa9.72□□□□□ -0.85
LIMK1-202ENST00000418310 TYMSP04818 313 aa9.72□□□□□ -0.85
LIMK1-202ENST00000418310 CT45A6P0DMU7 189 aa9.72□□□□□ -0.85
LIMK1-202ENST00000418310 CT45A5P0DMU8 189 aa9.72□□□□□ -0.85
LIMK1-202ENST00000418310 CT45A7P0DMV0 189 aa9.72□□□□□ -0.85
LIMK1-202ENST00000418310 PYYP10082 97 aa9.72□□□□□ -0.85
LIMK1-202ENST00000418310 IRF2P14316 349 aa9.72□□□□□ -0.85
LIMK1-202ENST00000418310 GLRXP35754 106 aa9.72□□□□□ -0.85
LIMK1-202ENST00000418310 LOXL4Q96JB6 756 aa9.72□□□□□ -0.85
LIMK1-202ENST00000418310 GAFA1Q96PS6 74 aa9.72□□□□□ -0.85
LIMK1-202ENST00000418310 NAGKQ9UJ70 344 aa9.72□□□□□ -0.85
LIMK1-202ENST00000418310 PMCHP20382 165 aa9.71□□□□□ -0.85
LIMK1-202ENST00000418310 COA6Q5JTJ3 125 aaKnown RBP9.71□□□□□ -0.85
LIMK1-202ENST00000418310 ST6GALNAC3Q8NDV1 305 aa9.71□□□□□ -0.85
LIMK1-202ENST00000418310 RNASEH2CQ8TDP1 164 aaKnown RBP9.71□□□□□ -0.85
LIMK1-202ENST00000418310 TMEM14BQ9NUH8 114 aa9.71□□□□□ -0.85
LIMK1-202ENST00000418310 DYSFO75923 2080 aa9.71□□□□□ -0.85
LIMK1-202ENST00000418310 AKAP6Q13023 2319 aa9.71□□□□□ -0.86
LIMK1-202ENST00000418310 A8MXE2 369 aa9.71□□□□□ -0.86
LIMK1-202ENST00000418310 KRTDAPP60985 99 aa9.71□□□□□ -0.86
LIMK1-202ENST00000418310 TP53TG3Q9ULZ0 132 aa9.71□□□□□ -0.86
LIMK1-202ENST00000418310 MT-CO2P00403 227 aa9.71□□□□□ -0.86
LIMK1-202ENST00000418310 LINC00869P0C866 280 aa9.71□□□□□ -0.86
LIMK1-202ENST00000418310 CYB5R2Q6BCY4 276 aa9.71□□□□□ -0.86
LIMK1-202ENST00000418310 NDUFAF3Q9BU61 184 aa9.71□□□□□ -0.86
LIMK1-202ENST00000418310 TEX50A0A1B0GTY4 177 aa9.7□□□□□ -0.86
LIMK1-202ENST00000418310 GGTLC3B5MD39 225 aa9.7□□□□□ -0.86
LIMK1-202ENST00000418310 ENSAO43768 121 aaKnown RBP9.7□□□□□ -0.86
LIMK1-202ENST00000418310 TOX4O94842 621 aa9.7□□□□□ -0.86
LIMK1-202ENST00000418310 PDLIM4P50479 330 aa9.7□□□□□ -0.86
LIMK1-202ENST00000418310 RTL8BQ17RB0 113 aa9.7□□□□□ -0.86
LIMK1-202ENST00000418310 RPEL1Q2QD12 228 aa9.7□□□□□ -0.86
LIMK1-202ENST00000418310 Q6ZWC4 215 aa9.7□□□□□ -0.86
LIMK1-202ENST00000418310 OR52E5Q8NH55 327 aa9.7□□□□□ -0.86
LIMK1-202ENST00000418310 COMMD5Q9GZQ3 224 aa9.7□□□□□ -0.86
LIMK1-202ENST00000418310 IL36BQ9NZH7 164 aa9.7□□□□□ -0.86
LIMK1-202ENST00000418310 RAI1Q7Z5J4 1906 aaPredicted RBP9.7□□□□□ -0.86
LIMK1-202ENST00000418310 FOXL1Q12952 345 aa9.7□□□□□ -0.86
LIMK1-202ENST00000418310 C21orf62-AS1Q17RA5 79 aa9.7□□□□□ -0.86
LIMK1-202ENST00000418310 TIMM23BQ5SRD1 257 aa9.7□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms