RNA–Protein interactions for RNA: ENST00000415950.4

SCN1B-202, Transcript of sodium voltage-gated channel beta subunit 1, humanhuman

TSL 1 (best) BASIC

Gene SCN1B, Length 4,537 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1B-202ENST00000415950 FAM90A10PA6NDY2 464 aa10.88□□□□□ -0.67
SCN1B-202ENST00000415950 FAM90A18PA6NE21 464 aa10.88□□□□□ -0.67
SCN1B-202ENST00000415950 FAM90A16PA6NEW6 464 aa10.88□□□□□ -0.67
SCN1B-202ENST00000415950 FAM90A20PA6NIJ5 464 aa10.88□□□□□ -0.67
SCN1B-202ENST00000415950 FAM90A8PA6NJQ4 464 aa10.88□□□□□ -0.67
SCN1B-202ENST00000415950 NPIPB13A6NJU9 1138 aa10.88□□□□□ -0.67
SCN1B-202ENST00000415950 FAM90A7PA6NKC0 464 aa10.88□□□□□ -0.67
SCN1B-202ENST00000415950 FAM90A22PA8MWA6 464 aa10.88□□□□□ -0.67
SCN1B-202ENST00000415950 FAM90A12PA8MX19 464 aa10.88□□□□□ -0.67
SCN1B-202ENST00000415950 FAM90A5PA8MXJ8 464 aa10.88□□□□□ -0.67
SCN1B-202ENST00000415950 FAM90A23PA8MXZ1 464 aa10.88□□□□□ -0.67
SCN1B-202ENST00000415950 NPIPB4C9JG80 1138 aa10.88□□□□□ -0.67
SCN1B-202ENST00000415950 FAM90A15PP0C7V4 464 aa10.88□□□□□ -0.67
SCN1B-202ENST00000415950 FAM90A13PP0C7W8 464 aa10.88□□□□□ -0.67
SCN1B-202ENST00000415950 FAM90A14PP0C7W9 464 aa10.88□□□□□ -0.67
SCN1B-202ENST00000415950 FAM90A24PP0C7X0 464 aa10.88□□□□□ -0.67
SCN1B-202ENST00000415950 PF4V1P10720 104 aa10.88□□□□□ -0.67
SCN1B-202ENST00000415950 C10orf128Q5T292 105 aa10.88□□□□□ -0.67
SCN1B-202ENST00000415950 C1QL4Q86Z23 238 aa10.88□□□□□ -0.67
SCN1B-202ENST00000415950 OR4D5Q8NGN0 318 aa10.88□□□□□ -0.67
SCN1B-202ENST00000415950 GTF3C1Q12789 2109 aa10.87□□□□□ -0.67
SCN1B-202ENST00000415950 ID3Q02535 119 aa10.87□□□□□ -0.67
SCN1B-202ENST00000415950 RIPPLY2Q5TAB7 128 aa10.87□□□□□ -0.67
SCN1B-202ENST00000415950 SERF1AO75920 110 aa10.87□□□□□ -0.67
SCN1B-202ENST00000415950 QRFPP83859 136 aa10.87□□□□□ -0.67
SCN1B-202ENST00000415950 NPCDR1Q9BY65 106 aa10.87□□□□□ -0.67
SCN1B-202ENST00000415950 WIPF3A6NGB9 483 aa10.87□□□□□ -0.67
SCN1B-202ENST00000415950 C12orf77C9JDV5 145 aa10.87□□□□□ -0.67
SCN1B-202ENST00000415950 RNASE1P07998 156 aaKnown RBP10.87□□□□□ -0.67
SCN1B-202ENST00000415950 ADIPOQQ15848 244 aa10.87□□□□□ -0.67
SCN1B-202ENST00000415950 SFTA2Q6UW10 78 aa10.87□□□□□ -0.67
SCN1B-202ENST00000415950 DERL1Q9BUN8 251 aa10.87□□□□□ -0.67
SCN1B-202ENST00000415950 IGHV3OR16-12A0A075B7B8 117 aa10.87□□□□□ -0.67
SCN1B-202ENST00000415950 FAM74A4Q5TZK3 123 aa10.87□□□□□ -0.67
SCN1B-202ENST00000415950 ZNF441Q8N8Z8 693 aa10.87□□□□□ -0.67
SCN1B-202ENST00000415950 TMEM160Q9NX00 188 aa10.87□□□□□ -0.67
SCN1B-202ENST00000415950 TMEM70Q9BUB7 260 aa10.86□□□□□ -0.67
SCN1B-202ENST00000415950 PKIBQ9C010 78 aa10.86□□□□□ -0.67
SCN1B-202ENST00000415950 MAP1LC3AQ9H492 121 aa10.86□□□□□ -0.67
SCN1B-202ENST00000415950 FBLN5Q9UBX5 448 aa10.86□□□□□ -0.67
SCN1B-202ENST00000415950 IGKV3-20P01619 116 aa10.86□□□□□ -0.67
SCN1B-202ENST00000415950 IL6RP08887 468 aaPredicted RBP10.86□□□□□ -0.67
SCN1B-202ENST00000415950 COX6A1P12074 109 aa10.86□□□□□ -0.67
SCN1B-202ENST00000415950 ANOS1P23352 680 aa10.86□□□□□ -0.67
SCN1B-202ENST00000415950 MC5RP33032 325 aa10.86□□□□□ -0.67
SCN1B-202ENST00000415950 PMS2CLQ68D20 193 aa10.86□□□□□ -0.67
SCN1B-202ENST00000415950 RPP25LQ8N5L8 163 aaKnown RBP10.86□□□□□ -0.67
SCN1B-202ENST00000415950 PSMG3Q9BT73 122 aaPredicted RBP10.86□□□□□ -0.67
SCN1B-202ENST00000415950 PIEZO2Q9H5I5 2752 aa10.86□□□□□ -0.67
SCN1B-202ENST00000415950 IGFBP2P18065 325 aa10.86□□□□□ -0.67
SCN1B-202ENST00000415950 JOSD1Q15040 202 aaPredicted RBP10.86□□□□□ -0.67
SCN1B-202ENST00000415950 HS3ST6Q96QI5 342 aa10.86□□□□□ -0.67
SCN1B-202ENST00000415950 CLDN16Q9Y5I7 305 aa10.86□□□□□ -0.67
SCN1B-202ENST00000415950 PHLDA3Q9Y5J5 127 aa10.86□□□□□ -0.67
SCN1B-202ENST00000415950 TMEM238LA0A1B0GVL6 79 aa10.85□□□□□ -0.67
SCN1B-202ENST00000415950 A6NJY4 79 aa10.85□□□□□ -0.67
SCN1B-202ENST00000415950 AREGP15514 252 aa10.85□□□□□ -0.67
SCN1B-202ENST00000415950 CA7P43166 264 aa10.85□□□□□ -0.67
SCN1B-202ENST00000415950 LCN2P80188 198 aa10.85□□□□□ -0.67
SCN1B-202ENST00000415950 UNQ5815/PRO19632Q6UWF5 114 aa10.85□□□□□ -0.67
SCN1B-202ENST00000415950 PLPPR1Q8TBJ4 325 aa10.85□□□□□ -0.67
SCN1B-202ENST00000415950 LIME1Q9H400 295 aa10.85□□□□□ -0.67
SCN1B-202ENST00000415950 SONP18583 2426 aaKnown RBP10.85□□□□□ -0.67
SCN1B-202ENST00000415950 RBFOX2O43251 390 aaKnown RBP eCLIP10.85□□□□□ -0.67
SCN1B-202ENST00000415950 Q5PR19 223 aa10.85□□□□□ -0.67
SCN1B-202ENST00000415950 TMEM54Q969K7 222 aa10.85□□□□□ -0.67
SCN1B-202ENST00000415950 CHD3Q12873 2000 aaKnown RBP10.85□□□□□ -0.67
SCN1B-202ENST00000415950 A0A087WWC5 75 aa10.85□□□□□ -0.67
SCN1B-202ENST00000415950 A0A0G2JRQ6 117 aa10.85□□□□□ -0.67
SCN1B-202ENST00000415950 LNP1A1A4G5 178 aa10.85□□□□□ -0.67
SCN1B-202ENST00000415950 CA1P00915 261 aaPredicted RBP10.85□□□□□ -0.67
SCN1B-202ENST00000415950 IL4P05112 153 aa10.85□□□□□ -0.67
SCN1B-202ENST00000415950 SCGB1A1P11684 91 aa10.85□□□□□ -0.67
SCN1B-202ENST00000415950 HOXB1P14653 301 aaPredicted RBP10.85□□□□□ -0.67
SCN1B-202ENST00000415950 TMEM136Q6ZRR5 245 aa10.85□□□□□ -0.67
SCN1B-202ENST00000415950 GCSAMQ8N6F7 178 aa10.85□□□□□ -0.67
SCN1B-202ENST00000415950 ZCCHC14Q8WYQ9 949 aaKnown RBP10.85□□□□□ -0.67
SCN1B-202ENST00000415950 WDYHV1Q96HA8 205 aa10.85□□□□□ -0.67
SCN1B-202ENST00000415950 RNASE7Q9H1E1 156 aaKnown RBP10.85□□□□□ -0.67
SCN1B-202ENST00000415950 RAXQ9Y2V3 346 aa10.85□□□□□ -0.67
SCN1B-202ENST00000415950 TMEM56-RWDD3S4R434 201 aa10.85□□□□□ -0.67
SCN1B-202ENST00000415950 FAM208BQ5VWN6 2430 aa10.85□□□□□ -0.67
SCN1B-202ENST00000415950 TGFAP01135 160 aa10.85□□□□□ -0.67
SCN1B-202ENST00000415950 CLPSP04118 112 aa10.85□□□□□ -0.67
SCN1B-202ENST00000415950 CELA3BP08861 270 aa10.85□□□□□ -0.67
SCN1B-202ENST00000415950 CX3CL1P78423 397 aa10.85□□□□□ -0.67
SCN1B-202ENST00000415950 PRDM14Q9GZV8 571 aa10.85□□□□□ -0.67
SCN1B-202ENST00000415950 ZGRF1Q86YA3 2104 aa10.84□□□□□ -0.67
SCN1B-202ENST00000415950 COX6CP09669 75 aa10.84□□□□□ -0.67
SCN1B-202ENST00000415950 EMP1P54849 157 aa10.84□□□□□ -0.67
SCN1B-202ENST00000415950 PRSS8Q16651 343 aa10.84□□□□□ -0.67
SCN1B-202ENST00000415950 ASCL5Q7RTU5 278 aa10.84□□□□□ -0.67
SCN1B-202ENST00000415950 LINC00305Q7Z4B0 112 aa10.84□□□□□ -0.67
SCN1B-202ENST00000415950 ZNF664Q8N3J9 261 aa10.84□□□□□ -0.67
SCN1B-202ENST00000415950 SIGLEC12Q96PQ1 595 aa10.84□□□□□ -0.67
SCN1B-202ENST00000415950 PLXNB1O43157 2135 aa10.84□□□□□ -0.67
SCN1B-202ENST00000415950 TRBV20OR9-2A0A075B6H5 130 aa10.84□□□□□ -0.67
SCN1B-202ENST00000415950 FOXI3A8MTJ6 420 aaPredicted RBP10.84□□□□□ -0.67
SCN1B-202ENST00000415950 CCL21O00585 134 aa10.84□□□□□ -0.67
SCN1B-202ENST00000415950 TYMSP04818 313 aa10.84□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms