RNA–Protein interactions for RNA: ENST00000415758.1

DDX56-202, Transcript of DEAD-box helicase 56, humanhuman

TSL 5

Gene DDX56, Length 1,287 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-202ENST00000415758 IGLL5B9A064 214 aa11.22□□□□□ -0.61
DDX56-202ENST00000415758 GNRHRP30968 328 aa11.22□□□□□ -0.61
DDX56-202ENST00000415758 TFPI2P48307 235 aa11.22□□□□□ -0.61
DDX56-202ENST00000415758 BORCS5Q969J3 196 aa11.22□□□□□ -0.61
DDX56-202ENST00000415758 CMTM3Q96MX0 182 aa11.22□□□□□ -0.61
DDX56-202ENST00000415758 TXN2Q99757 166 aa11.22□□□□□ -0.61
DDX56-202ENST00000415758 RHBDL2Q9NX52 303 aa11.22□□□□□ -0.61
DDX56-202ENST00000415758 DAPK2Q9UIK4 370 aa11.22□□□□□ -0.61
DDX56-202ENST00000415758 TRAV14DV4A0A0A6YYC5 116 aa11.21□□□□□ -0.61
DDX56-202ENST00000415758 A0A1B0GVY2 172 aa11.21□□□□□ -0.61
DDX56-202ENST00000415758 DEFB4AO15263 64 aa11.21□□□□□ -0.61
DDX56-202ENST00000415758 NUPL2O15504 423 aaKnown RBP11.21□□□□□ -0.61
DDX56-202ENST00000415758 DFFBO76075 338 aa11.21□□□□□ -0.61
DDX56-202ENST00000415758 CA1P00915 261 aaPredicted RBP11.21□□□□□ -0.61
DDX56-202ENST00000415758 F2RP25116 425 aa11.21□□□□□ -0.61
DDX56-202ENST00000415758 SCAND1P57086 179 aa11.21□□□□□ -0.61
DDX56-202ENST00000415758 FXYD4P59646 89 aa11.21□□□□□ -0.61
DDX56-202ENST00000415758 ERVK-16P61578 105 aa11.21□□□□□ -0.61
DDX56-202ENST00000415758 PAFAH1B2P68402 229 aa11.21□□□□□ -0.61
DDX56-202ENST00000415758 AADACL3Q5VUY0 350 aa11.21□□□□□ -0.61
DDX56-202ENST00000415758 Q8NAQ8 132 aa11.21□□□□□ -0.61
DDX56-202ENST00000415758 OR5AP2Q8NGF4 316 aa11.21□□□□□ -0.61
DDX56-202ENST00000415758 OR1P1Q8NH06 330 aa11.21□□□□□ -0.61
DDX56-202ENST00000415758 LGALS14Q8TCE9 139 aa11.21□□□□□ -0.61
DDX56-202ENST00000415758 NRG4Q8WWG1 115 aa11.21□□□□□ -0.61
DDX56-202ENST00000415758 TMEM56Q96MV1 263 aa11.21□□□□□ -0.61
DDX56-202ENST00000415758 NXF2Q9GZY0 626 aaKnown RBP11.21□□□□□ -0.61
DDX56-202ENST00000415758 TXNL4BQ9NX01 149 aaKnown RBP11.21□□□□□ -0.61
DDX56-202ENST00000415758 OR51B2Q9Y5P1 312 aa11.21□□□□□ -0.61
DDX56-202ENST00000415758 FAT2Q9NYQ8 4349 aa11.2□□□□□ -0.62
DDX56-202ENST00000415758 PKHD1P08F94 4074 aa11.2□□□□□ -0.62
DDX56-202ENST00000415758 TRAV18A0A075B6X5 111 aa11.2□□□□□ -0.62
DDX56-202ENST00000415758 A0A0A6YYH2 397 aa11.2□□□□□ -0.62
DDX56-202ENST00000415758 A6NJ64 397 aa11.2□□□□□ -0.62
DDX56-202ENST00000415758 MED14OSP0DP75 135 aa11.2□□□□□ -0.62
DDX56-202ENST00000415758 SFXN4Q6P4A7 337 aa11.2□□□□□ -0.62
DDX56-202ENST00000415758 HINT2Q9BX68 163 aa11.2□□□□□ -0.62
DDX56-202ENST00000415758 FKBP11Q9NYL4 201 aa11.2□□□□□ -0.62
DDX56-202ENST00000415758 DNAH2Q9P225 4427 aa11.19□□□□□ -0.62
DDX56-202ENST00000415758 MUC4Q99102 2169 aa11.19□□□□□ -0.62
DDX56-202ENST00000415758 IGKV3-7A0A075B6H7 116 aa11.19□□□□□ -0.62
DDX56-202ENST00000415758 IGHV3-49A0A0A0MS15 119 aa11.19□□□□□ -0.62
DDX56-202ENST00000415758 TRAV2A0A0B4J234 112 aa11.19□□□□□ -0.62
DDX56-202ENST00000415758 I3L2K1 104 aa11.19□□□□□ -0.62
DDX56-202ENST00000415758 PGLYRP1O75594 196 aaPredicted RBP11.19□□□□□ -0.62
DDX56-202ENST00000415758 SNAPC5O75971 98 aa11.19□□□□□ -0.62
DDX56-202ENST00000415758 YIF1AO95070 293 aa11.19□□□□□ -0.62
DDX56-202ENST00000415758 KRASP01116 189 aa11.19□□□□□ -0.62
DDX56-202ENST00000415758 MFAP4P55083 255 aa11.19□□□□□ -0.62
DDX56-202ENST00000415758 DHRS11Q6UWP2 260 aa11.19□□□□□ -0.62
DDX56-202ENST00000415758 GBGT1Q8N5D6 347 aa11.19□□□□□ -0.62
DDX56-202ENST00000415758 FCAMRQ8WWV6 532 aa11.19□□□□□ -0.62
DDX56-202ENST00000415758 VSIRQ9H7M9 311 aa11.19□□□□□ -0.62
DDX56-202ENST00000415758 PRNDQ9UKY0 176 aa11.19□□□□□ -0.62
DDX56-202ENST00000415758 BLOC1S6Q9UL45 172 aa11.19□□□□□ -0.62
DDX56-202ENST00000415758 NSG2Q9Y328 171 aa11.19□□□□□ -0.62
DDX56-202ENST00000415758 RRP15Q9Y3B9 282 aaKnown RBP11.19□□□□□ -0.62
DDX56-202ENST00000415758 RBMY1A1P0DJD3 496 aaKnown RBP11.18□□□□□ -0.62
DDX56-202ENST00000415758 RBMY1CP0DJD4 496 aa11.18□□□□□ -0.62
DDX56-202ENST00000415758 RBMY1FQ15415 496 aaKnown RBP11.18□□□□□ -0.62
DDX56-202ENST00000415758 TMEM41BQ5BJD5 291 aa11.18□□□□□ -0.62
DDX56-202ENST00000415758 TCF24Q7RTU0 167 aa11.18□□□□□ -0.62
DDX56-202ENST00000415758 TMEM17Q86X19 198 aa11.18□□□□□ -0.62
DDX56-202ENST00000415758 SLC25A46Q96AG3 418 aa11.18□□□□□ -0.62
DDX56-202ENST00000415758 SLC25A38Q96DW6 304 aa11.18□□□□□ -0.62
DDX56-202ENST00000415758 AUNIPQ9H7T9 357 aa11.18□□□□□ -0.62
DDX56-202ENST00000415758 TMEM14BQ9NUH8 114 aa11.18□□□□□ -0.62
DDX56-202ENST00000415758 DBX1A6NMT0 343 aa11.17□□□□□ -0.62
DDX56-202ENST00000415758 GIG44P09565 113 aaPredicted RBP11.17□□□□□ -0.62
DDX56-202ENST00000415758 MIFP14174 115 aa11.17□□□□□ -0.62
DDX56-202ENST00000415758 G6PCP35575 357 aa11.17□□□□□ -0.62
DDX56-202ENST00000415758 LPAR6P43657 344 aa11.17□□□□□ -0.62
DDX56-202ENST00000415758 CBX5P45973 191 aa11.17□□□□□ -0.62
DDX56-202ENST00000415758 DEFB131AP59861 70 aa11.17□□□□□ -0.62
DDX56-202ENST00000415758 UBE2UQ5VVX9 321 aa11.17□□□□□ -0.62
DDX56-202ENST00000415758 LILRB2Q8N423 598 aa11.17□□□□□ -0.62
DDX56-202ENST00000415758 ZNF114Q8NC26 417 aa11.17□□□□□ -0.62
DDX56-202ENST00000415758 DUSP18Q8NEJ0 188 aa11.17□□□□□ -0.62
DDX56-202ENST00000415758 OR5H6Q8NGV6 325 aa11.17□□□□□ -0.62
DDX56-202ENST00000415758 GINS3Q9BRX5 216 aa11.17□□□□□ -0.62
DDX56-202ENST00000415758 MS4A6AQ9H2W1 248 aa11.17□□□□□ -0.62
DDX56-202ENST00000415758 IGHV4-4A0A075B6R2 117 aa11.16□□□□□ -0.62
DDX56-202ENST00000415758 IGHV3OR16-13A0A075B7E8 117 aa11.16□□□□□ -0.62
DDX56-202ENST00000415758 IGHV3-74A0A0B4J1X5 117 aa11.16□□□□□ -0.62
DDX56-202ENST00000415758 TRAV10A0A0B4J240 114 aa11.16□□□□□ -0.62
DDX56-202ENST00000415758 ZNF705EA8MWA4 302 aaPredicted RBP11.16□□□□□ -0.62
DDX56-202ENST00000415758 XRCC3O43542 346 aa11.16□□□□□ -0.62
DDX56-202ENST00000415758 RLN1P04808 185 aa11.16□□□□□ -0.62
DDX56-202ENST00000415758 HLA-DMBP28068 263 aa11.16□□□□□ -0.62
DDX56-202ENST00000415758 HERV-K104P61576 105 aa11.16□□□□□ -0.62
DDX56-202ENST00000415758 LEMD1Q68G75 181 aa11.16□□□□□ -0.62
DDX56-202ENST00000415758 TOMM20LQ6UXN7 152 aa11.16□□□□□ -0.62
DDX56-202ENST00000415758 ST8SIA2Q92186 375 aa11.16□□□□□ -0.62
DDX56-202ENST00000415758 MOB3AQ96BX8 217 aa11.16□□□□□ -0.62
DDX56-202ENST00000415758 TSC22D3Q99576 134 aa11.16□□□□□ -0.62
DDX56-202ENST00000415758 AGRNO00468 2067 aa11.15□□□□□ -0.62
DDX56-202ENST00000415758 DNAH17Q9UFH2 4485 aa11.15□□□□□ -0.62
DDX56-202ENST00000415758 IGHV4-28A0A0C4DH34 117 aa11.15□□□□□ -0.62
DDX56-202ENST00000415758 DNASE2O00115 360 aaPredicted RBP11.15□□□□□ -0.62
DDX56-202ENST00000415758 ST8SIA3O43173 380 aa11.15□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms