RNA–Protein interactions for RNA: ENST00000413872.6

PHRF1-202, Transcript of PHD and ring finger domains 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PHRF1, Length 5,224 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHRF1-202ENST00000413872 WNT2P09544 360 aa14.41□□□□□ -0.1
PHRF1-202ENST00000413872 LYNX1P0DP58 116 aa14.41□□□□□ -0.1
PHRF1-202ENST00000413872 ZP1P60852 638 aa14.41□□□□□ -0.1
PHRF1-202ENST00000413872 OR11H4Q8NGC9 324 aa14.41□□□□□ -0.1
PHRF1-202ENST00000413872 OR1N2Q8NGR9 330 aa14.41□□□□□ -0.1
PHRF1-202ENST00000413872 IFT22Q9H7X7 185 aa14.41□□□□□ -0.1
PHRF1-202ENST00000413872 CACNA1GO43497 2377 aa14.41□□□□□ -0.1
PHRF1-202ENST00000413872 IFITM10A6NMD0 228 aa14.41□□□□□ -0.1
PHRF1-202ENST00000413872 PPP1R17O96001 155 aa14.41□□□□□ -0.1
PHRF1-202ENST00000413872 B3GALT5-AS1P59052 145 aa14.41□□□□□ -0.1
PHRF1-202ENST00000413872 KIR2DL4Q99706 377 aa14.41□□□□□ -0.1
PHRF1-202ENST00000413872 GPR179Q6PRD1 2367 aa14.4□□□□□ -0.1
PHRF1-202ENST00000413872 A6NDN8 102 aa14.4□□□□□ -0.1
PHRF1-202ENST00000413872 CEACAM4O75871 244 aa14.4□□□□□ -0.1
PHRF1-202ENST00000413872 HERPUD1Q15011 391 aa14.4□□□□□ -0.1
PHRF1-202ENST00000413872 DCAF16Q9NXF7 216 aa14.4□□□□□ -0.1
PHRF1-202ENST00000413872 HLA-DRB1P01911 266 aa14.4□□□□□ -0.1
PHRF1-202ENST00000413872 MINOS1Q5TGZ0 78 aa14.4□□□□□ -0.1
PHRF1-202ENST00000413872 HEPN1Q6WQI6 88 aa14.4□□□□□ -0.1
PHRF1-202ENST00000413872 OR4C5Q8NGB2 326 aa14.4□□□□□ -0.1
PHRF1-202ENST00000413872 MINOS1-NBL1R4GNA1 71 aa14.4□□□□□ -0.1
PHRF1-202ENST00000413872 IGHV3OR16-13A0A075B7E8 117 aa14.4□□□□□ -0.1
PHRF1-202ENST00000413872 IGHV3-74A0A0B4J1X5 117 aa14.4□□□□□ -0.1
PHRF1-202ENST00000413872 B4DSR2 109 aa14.4□□□□□ -0.1
PHRF1-202ENST00000413872 RNF224P0DH78 156 aa14.4□□□□□ -0.1
PHRF1-202ENST00000413872 TMEM178BH3BS89 294 aa14.39□□□□□ -0.11
PHRF1-202ENST00000413872 IGHV3-23P01764 117 aa14.39□□□□□ -0.11
PHRF1-202ENST00000413872 CENPWQ5EE01 88 aa14.39□□□□□ -0.11
PHRF1-202ENST00000413872 NUDT3O95989 172 aa14.39□□□□□ -0.11
PHRF1-202ENST00000413872 ZNF56Q15929 161 aa14.39□□□□□ -0.11
PHRF1-202ENST00000413872 ZNF600Q6ZNG1 722 aa14.39□□□□□ -0.11
PHRF1-202ENST00000413872 SLC50A1Q9BRV3 221 aa14.39□□□□□ -0.11
PHRF1-202ENST00000413872 COL25A1Q9BXS0 654 aaPredicted RBP14.39□□□□□ -0.11
PHRF1-202ENST00000413872 DUTP33316 252 aaKnown RBP14.39□□□□□ -0.11
PHRF1-202ENST00000413872 LHFPL5Q8TAF8 219 aa14.39□□□□□ -0.11
PHRF1-202ENST00000413872 IGKV1D-13A0A0B4J2D9 117 aa14.39□□□□□ -0.11
PHRF1-202ENST00000413872 DIRC3C9JPN6 131 aa14.39□□□□□ -0.11
PHRF1-202ENST00000413872 OR9G9P0C7N8 305 aa14.39□□□□□ -0.11
PHRF1-202ENST00000413872 IGKV1-13P0DP09 117 aa14.39□□□□□ -0.11
PHRF1-202ENST00000413872 PLA2G2CQ5R387 149 aa14.39□□□□□ -0.11
PHRF1-202ENST00000413872 TBX15Q96SF7 602 aa14.39□□□□□ -0.11
PHRF1-202ENST00000413872 RNF5Q99942 180 aa14.39□□□□□ -0.11
PHRF1-202ENST00000413872 C5orf52A6NGY3 159 aa14.38□□□□□ -0.11
PHRF1-202ENST00000413872 CRXO43186 299 aaPredicted RBP14.38□□□□□ -0.11
PHRF1-202ENST00000413872 PUSL1Q8N0Z8 303 aaKnown RBP14.38□□□□□ -0.11
PHRF1-202ENST00000413872 C18orf12Q96KH6 178 aa14.38□□□□□ -0.11
PHRF1-202ENST00000413872 ZNF324O75467 553 aaPredicted RBP14.38□□□□□ -0.11
PHRF1-202ENST00000413872 ASIPP42127 132 aa14.38□□□□□ -0.11
PHRF1-202ENST00000413872 SFRP2Q96HF1 295 aa14.38□□□□□ -0.11
PHRF1-202ENST00000413872 RARRES2Q99969 163 aa14.38□□□□□ -0.11
PHRF1-202ENST00000413872 VPS25Q9BRG1 176 aa14.38□□□□□ -0.11
PHRF1-202ENST00000413872 MRPL18Q9H0U6 180 aaKnown RBP14.38□□□□□ -0.11
PHRF1-202ENST00000413872 TRAV40A0A0B4J280 105 aa14.38□□□□□ -0.11
PHRF1-202ENST00000413872 TIMM23O14925 209 aa14.38□□□□□ -0.11
PHRF1-202ENST00000413872 PAX1P15863 534 aa14.38□□□□□ -0.11
PHRF1-202ENST00000413872 ZNF324BQ6AW86 544 aaPredicted RBP14.38□□□□□ -0.11
PHRF1-202ENST00000413872 ZNF502Q8TBZ5 544 aa14.38□□□□□ -0.11
PHRF1-202ENST00000413872 HEATR5BQ9P2D3 2071 aa14.38□□□□□ -0.11
PHRF1-202ENST00000413872 PRCDQ00LT1 54 aa14.38□□□□□ -0.11
PHRF1-202ENST00000413872 FAM166AQ6J272 317 aa14.38□□□□□ -0.11
PHRF1-202ENST00000413872 PAQR4Q8N4S7 273 aaPredicted RBP14.38□□□□□ -0.11
PHRF1-202ENST00000413872 PI4KAP42356 2102 aa14.38□□□□□ -0.11
PHRF1-202ENST00000413872 FMC1Q96HJ9 113 aa14.38□□□□□ -0.11
PHRF1-202ENST00000413872 KIF26BQ2KJY2 2108 aa14.37□□□□□ -0.11
PHRF1-202ENST00000413872 ZNF525Q8N782 197 aa14.37□□□□□ -0.11
PHRF1-202ENST00000413872 TMEM70Q9BUB7 260 aa14.37□□□□□ -0.11
PHRF1-202ENST00000413872 SNRNP200O75643 2136 aaKnown RBP14.37□□□□□ -0.11
PHRF1-202ENST00000413872 ITLN2Q8WWU7 325 aaPredicted RBP14.37□□□□□ -0.11
PHRF1-202ENST00000413872 MOB4Q9Y3A3 225 aa14.37□□□□□ -0.11
PHRF1-202ENST00000413872 PEX7O00628 323 aa14.37□□□□□ -0.11
PHRF1-202ENST00000413872 ZNF207O43670 478 aaKnown RBP14.37□□□□□ -0.11
PHRF1-202ENST00000413872 Q5BKY6 102 aa14.37□□□□□ -0.11
PHRF1-202ENST00000413872 IGFL3Q6UXB1 125 aa14.37□□□□□ -0.11
PHRF1-202ENST00000413872 IGHV3-49A0A0A0MS15 119 aa14.37□□□□□ -0.11
PHRF1-202ENST00000413872 IGKV3-20P01619 116 aa14.37□□□□□ -0.11
PHRF1-202ENST00000413872 SLC25A16P16260 332 aa14.37□□□□□ -0.11
PHRF1-202ENST00000413872 Q6AWC8 147 aa14.37□□□□□ -0.11
PHRF1-202ENST00000413872 NR2C2APQ86WQ0 139 aa14.37□□□□□ -0.11
PHRF1-202ENST00000413872 CIARTQ8N365 385 aaPredicted RBP14.37□□□□□ -0.11
PHRF1-202ENST00000413872 S4R3C0 116 aa14.37□□□□□ -0.11
PHRF1-202ENST00000413872 GGCTO75223 188 aaKnown RBP14.36□□□□□ -0.11
PHRF1-202ENST00000413872 TFF3Q07654 80 aa14.36□□□□□ -0.11
PHRF1-202ENST00000413872 COPS9Q8WXC6 57 aa14.36□□□□□ -0.11
PHRF1-202ENST00000413872 TMEM190Q8WZ59 177 aa14.36□□□□□ -0.11
PHRF1-202ENST00000413872 ATG101Q9BSB4 218 aa14.36□□□□□ -0.11
PHRF1-202ENST00000413872 IGKV1-12A0A0C4DH73 117 aa14.36□□□□□ -0.11
PHRF1-202ENST00000413872 M0R1W7 72 aa14.36□□□□□ -0.11
PHRF1-202ENST00000413872 LEPROTL1O95214 131 aa14.36□□□□□ -0.11
PHRF1-202ENST00000413872 IGKV1D-12P01611 117 aa14.36□□□□□ -0.11
PHRF1-202ENST00000413872 A0A0B4J293 547 aa14.36□□□□□ -0.11
PHRF1-202ENST00000413872 IGHV3-11P01762 117 aa14.36□□□□□ -0.11
PHRF1-202ENST00000413872 HBBP68871 147 aa14.36□□□□□ -0.11
PHRF1-202ENST00000413872 PMCHL1Q16048 86 aa14.36□□□□□ -0.11
PHRF1-202ENST00000413872 FAM74A4Q5TZK3 123 aa14.36□□□□□ -0.11
PHRF1-202ENST00000413872 FOXL2NBQ6ZUU3 175 aa14.36□□□□□ -0.11
PHRF1-202ENST00000413872 RHOGP84095 191 aa14.36□□□□□ -0.11
PHRF1-202ENST00000413872 LBHQ53QV2 105 aaPredicted RBP14.36□□□□□ -0.11
PHRF1-202ENST00000413872 OR10AG1Q8NH19 301 aa14.36□□□□□ -0.11
PHRF1-202ENST00000413872 C8orf46Q8TAG6 207 aa14.36□□□□□ -0.11
PHRF1-202ENST00000413872 IGHV2-26A0A0B4J1V2 119 aa14.35□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms