RNA–Protein interactions for RNA: ENST00000411527.5

HLA-DQB2-229, Transcript of major histocompatibility complex, class II, DQ beta 2, humanhuman

BASIC

Gene HLA-DQB2, Length 1,059 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB2-229ENST00000411527 MARCH11A6NNE9 402 aa10.44□□□□□ -0.74
HLA-DQB2-229ENST00000411527 DEFB4AO15263 64 aa10.44□□□□□ -0.74
HLA-DQB2-229ENST00000411527 YIF1AO95070 293 aa10.44□□□□□ -0.74
HLA-DQB2-229ENST00000411527 LPAR6P43657 344 aa10.44□□□□□ -0.74
HLA-DQB2-229ENST00000411527 GBGT1Q8N5D6 347 aa10.44□□□□□ -0.74
HLA-DQB2-229ENST00000411527 OR5AP2Q8NGF4 316 aa10.44□□□□□ -0.74
HLA-DQB2-229ENST00000411527 OR5H6Q8NGV6 325 aa10.44□□□□□ -0.74
HLA-DQB2-229ENST00000411527 OR51B2Q9Y5P1 312 aa10.44□□□□□ -0.74
HLA-DQB2-229ENST00000411527 KIAA1109Q2LD37 5005 aa10.44□□□□□ -0.74
HLA-DQB2-229ENST00000411527 IGHV3OR16-13A0A075B7E8 117 aa10.43□□□□□ -0.74
HLA-DQB2-229ENST00000411527 IGHV3-74A0A0B4J1X5 117 aa10.43□□□□□ -0.74
HLA-DQB2-229ENST00000411527 MRPS14O60783 128 aaKnown RBP10.43□□□□□ -0.74
HLA-DQB2-229ENST00000411527 SNAPC5O75971 98 aa10.43□□□□□ -0.74
HLA-DQB2-229ENST00000411527 KRASP01116 189 aa10.43□□□□□ -0.74
HLA-DQB2-229ENST00000411527 F2RP25116 425 aa10.43□□□□□ -0.74
HLA-DQB2-229ENST00000411527 GNRHRP30968 328 aa10.43□□□□□ -0.74
HLA-DQB2-229ENST00000411527 TCTAP57738 103 aa10.43□□□□□ -0.74
HLA-DQB2-229ENST00000411527 HERV-K104P61576 105 aa10.43□□□□□ -0.74
HLA-DQB2-229ENST00000411527 RELQ04864 619 aaPredicted RBP10.43□□□□□ -0.74
HLA-DQB2-229ENST00000411527 MXD1Q05195 221 aa10.43□□□□□ -0.74
HLA-DQB2-229ENST00000411527 BORCS5Q969J3 196 aa10.43□□□□□ -0.74
HLA-DQB2-229ENST00000411527 SLC25A38Q96DW6 304 aa10.43□□□□□ -0.74
HLA-DQB2-229ENST00000411527 ZNF414Q96IQ9 312 aa10.43□□□□□ -0.74
HLA-DQB2-229ENST00000411527 TMEM56Q96MV1 263 aa10.43□□□□□ -0.74
HLA-DQB2-229ENST00000411527 CMTM3Q96MX0 182 aa10.43□□□□□ -0.74
HLA-DQB2-229ENST00000411527 SSR3Q9UNL2 185 aa10.43□□□□□ -0.74
HLA-DQB2-229ENST00000411527 TRAV14DV4A0A0A6YYC5 116 aa10.42□□□□□ -0.74
HLA-DQB2-229ENST00000411527 MEIS3P1A6NDR6 274 aa10.42□□□□□ -0.74
HLA-DQB2-229ENST00000411527 IGLL5B9A064 214 aa10.42□□□□□ -0.74
HLA-DQB2-229ENST00000411527 NUPL2O15504 423 aaKnown RBP10.42□□□□□ -0.74
HLA-DQB2-229ENST00000411527 CA1P00915 261 aaPredicted RBP10.42□□□□□ -0.74
HLA-DQB2-229ENST00000411527 RLN1P04808 185 aa10.42□□□□□ -0.74
HLA-DQB2-229ENST00000411527 CLEC2LP0C7M8 214 aa10.42□□□□□ -0.74
HLA-DQB2-229ENST00000411527 PSMB9P28065 219 aa10.42□□□□□ -0.74
HLA-DQB2-229ENST00000411527 SDC2P34741 201 aa10.42□□□□□ -0.74
HLA-DQB2-229ENST00000411527 G6PCP35575 357 aa10.42□□□□□ -0.74
HLA-DQB2-229ENST00000411527 UBE2UQ5VVX9 321 aa10.42□□□□□ -0.74
HLA-DQB2-229ENST00000411527 FCAMRQ8WWV6 532 aa10.42□□□□□ -0.74
HLA-DQB2-229ENST00000411527 SLC25A46Q96AG3 418 aa10.42□□□□□ -0.74
HLA-DQB2-229ENST00000411527 OR10C1Q96KK4 312 aa10.42□□□□□ -0.74
HLA-DQB2-229ENST00000411527 AUNIPQ9H7T9 357 aa10.42□□□□□ -0.74
HLA-DQB2-229ENST00000411527 DIABLOQ9NR28 239 aa10.42□□□□□ -0.74
HLA-DQB2-229ENST00000411527 A0A0A6YYH2 397 aa10.41□□□□□ -0.74
HLA-DQB2-229ENST00000411527 A6NJ64 397 aa10.41□□□□□ -0.74
HLA-DQB2-229ENST00000411527 PGLYRP1O75594 196 aaPredicted RBP10.41□□□□□ -0.74
HLA-DQB2-229ENST00000411527 CBX5P45973 191 aa10.41□□□□□ -0.74
HLA-DQB2-229ENST00000411527 MFAP4P55083 255 aa10.41□□□□□ -0.74
HLA-DQB2-229ENST00000411527 PAFAH1B2P68402 229 aa10.41□□□□□ -0.74
HLA-DQB2-229ENST00000411527 TMEM187Q14656 261 aa10.41□□□□□ -0.74
HLA-DQB2-229ENST00000411527 IDNKQ5T6J7 187 aa10.41□□□□□ -0.74
HLA-DQB2-229ENST00000411527 FAM90A2PQ658T7 463 aa10.41□□□□□ -0.74
HLA-DQB2-229ENST00000411527 IZUMO2Q6UXV1 221 aa10.41□□□□□ -0.74
HLA-DQB2-229ENST00000411527 TCF24Q7RTU0 167 aa10.41□□□□□ -0.74
HLA-DQB2-229ENST00000411527 TSPAN14Q8NG11 270 aa10.41□□□□□ -0.74
HLA-DQB2-229ENST00000411527 OR1P1Q8NH06 330 aa10.41□□□□□ -0.74
HLA-DQB2-229ENST00000411527 DGCR14Q96DF8 476 aaKnown RBP10.41□□□□□ -0.74
HLA-DQB2-229ENST00000411527 MISP3Q96FF7 219 aa10.41□□□□□ -0.74
HLA-DQB2-229ENST00000411527 EHFQ9NZC4 300 aa10.41□□□□□ -0.74
HLA-DQB2-229ENST00000411527 PRNDQ9UKY0 176 aa10.41□□□□□ -0.74
HLA-DQB2-229ENST00000411527 APLNQ9ULZ1 77 aa10.41□□□□□ -0.74
HLA-DQB2-229ENST00000411527 HECTD4Q9Y4D8 3996 aa10.41□□□□□ -0.74
HLA-DQB2-229ENST00000411527 DNAH6Q9C0G6 4158 aa10.4□□□□□ -0.74
HLA-DQB2-229ENST00000411527 DBX1A6NMT0 343 aa10.4□□□□□ -0.74
HLA-DQB2-229ENST00000411527 RFX2P48378 723 aa10.4□□□□□ -0.74
HLA-DQB2-229ENST00000411527 HSPA13P48723 471 aa10.4□□□□□ -0.74
HLA-DQB2-229ENST00000411527 SCAND1P57086 179 aa10.4□□□□□ -0.74
HLA-DQB2-229ENST00000411527 DHRS11Q6UWP2 260 aa10.4□□□□□ -0.74
HLA-DQB2-229ENST00000411527 CADM3Q8N126 398 aa10.4□□□□□ -0.74
HLA-DQB2-229ENST00000411527 TXN2Q99757 166 aa10.4□□□□□ -0.74
HLA-DQB2-229ENST00000411527 ZNF2Q9BSG1 426 aaPredicted RBP10.4□□□□□ -0.74
HLA-DQB2-229ENST00000411527 NXF2Q9GZY0 626 aaKnown RBP10.4□□□□□ -0.74
HLA-DQB2-229ENST00000411527 VCX3BQ9H321 246 aa10.4□□□□□ -0.74
HLA-DQB2-229ENST00000411527 FKBP11Q9NYL4 201 aa10.4□□□□□ -0.74
HLA-DQB2-229ENST00000411527 I3L2K1 104 aa10.39□□□□□ -0.75
HLA-DQB2-229ENST00000411527 DNASE2O00115 360 aaPredicted RBP10.39□□□□□ -0.75
HLA-DQB2-229ENST00000411527 IGHV3-48P01763 117 aa10.39□□□□□ -0.75
HLA-DQB2-229ENST00000411527 GABARAPL2P60520 117 aa10.39□□□□□ -0.75
HLA-DQB2-229ENST00000411527 LEMD1Q68G75 181 aa10.39□□□□□ -0.75
HLA-DQB2-229ENST00000411527 SPARTQ8N0X7 666 aa10.39□□□□□ -0.75
HLA-DQB2-229ENST00000411527 MOB3AQ96BX8 217 aa10.39□□□□□ -0.75
HLA-DQB2-229ENST00000411527 RNF167Q9H6Y7 350 aa10.39□□□□□ -0.75
HLA-DQB2-229ENST00000411527 IFT46Q9NQC8 304 aa10.39□□□□□ -0.75
HLA-DQB2-229ENST00000411527 C15orf61A6NNL5 157 aa10.38□□□□□ -0.75
HLA-DQB2-229ENST00000411527 C11orf94C9JXX5 98 aa10.38□□□□□ -0.75
HLA-DQB2-229ENST00000411527 ST8SIA3O43173 380 aa10.38□□□□□ -0.75
HLA-DQB2-229ENST00000411527 XRCC3O43542 346 aa10.38□□□□□ -0.75
HLA-DQB2-229ENST00000411527 GNG7O60262 68 aa10.38□□□□□ -0.75
HLA-DQB2-229ENST00000411527 MT-CO2P00403 227 aa10.38□□□□□ -0.75
HLA-DQB2-229ENST00000411527 CD5P06127 495 aa10.38□□□□□ -0.75
HLA-DQB2-229ENST00000411527 EIF4EP06730 217 aaKnown RBP10.38□□□□□ -0.75
HLA-DQB2-229ENST00000411527 DEFB131AP59861 70 aa10.38□□□□□ -0.75
HLA-DQB2-229ENST00000411527 RPL11P62913 178 aaKnown RBP10.38□□□□□ -0.75
HLA-DQB2-229ENST00000411527 CMTM1Q8IZ96 169 aa10.38□□□□□ -0.75
HLA-DQB2-229ENST00000411527 LILRB2Q8N423 598 aa10.38□□□□□ -0.75
HLA-DQB2-229ENST00000411527 ST8SIA2Q92186 375 aa10.38□□□□□ -0.75
HLA-DQB2-229ENST00000411527 TSC22D3Q99576 134 aa10.38□□□□□ -0.75
HLA-DQB2-229ENST00000411527 GINS3Q9BRX5 216 aa10.38□□□□□ -0.75
HLA-DQB2-229ENST00000411527 MS4A6AQ9H2W1 248 aa10.38□□□□□ -0.75
HLA-DQB2-229ENST00000411527 TMEM14BQ9NUH8 114 aa10.38□□□□□ -0.75
HLA-DQB2-229ENST00000411527 DFFBO76075 338 aa10.37□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms