RNA–Protein interactions for RNA: ENST00000409782.5

LSM5-203, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 5 BASIC

Gene LSM5, Length 649 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-203ENST00000409782 KCNIP1Q9NZI2 227 aa4.65□□□□□ -1.67
LSM5-203ENST00000409782 PEF1Q9UBV8 284 aaKnown RBP4.65□□□□□ -1.67
LSM5-203ENST00000409782 JPT1Q9UK76 154 aa4.65□□□□□ -1.67
LSM5-203ENST00000409782 PRKDCP78527 4128 aaKnown RBP4.65□□□□□ -1.67
LSM5-203ENST00000409782 IGHV1-3A0A0C4DH29 117 aa4.64□□□□□ -1.67
LSM5-203ENST00000409782 TMEM50AO95807 157 aa4.64□□□□□ -1.67
LSM5-203ENST00000409782 IGKV1D-33P01593 117 aa4.64□□□□□ -1.67
LSM5-203ENST00000409782 IGKV1-33P01594 117 aa4.64□□□□□ -1.67
LSM5-203ENST00000409782 IGHV3-7P01780 117 aa4.64□□□□□ -1.67
LSM5-203ENST00000409782 GAPDHP04406 335 aaKnown RBP4.64□□□□□ -1.67
LSM5-203ENST00000409782 RCC1P18754 421 aaPredicted RBP4.64□□□□□ -1.67
LSM5-203ENST00000409782 CD24P25063 80 aa4.64□□□□□ -1.67
LSM5-203ENST00000409782 MAP2K4P45985 399 aa4.64□□□□□ -1.67
LSM5-203ENST00000409782 PSMD7P51665 324 aa4.64□□□□□ -1.67
LSM5-203ENST00000409782 BLCAPP62952 87 aa4.64□□□□□ -1.67
LSM5-203ENST00000409782 UNC119Q13432 240 aa4.64□□□□□ -1.67
LSM5-203ENST00000409782 EBI3Q14213 229 aa4.64□□□□□ -1.67
LSM5-203ENST00000409782 HMGN3Q15651 99 aa4.64□□□□□ -1.67
LSM5-203ENST00000409782 CNPY1Q3B7I2 92 aa4.64□□□□□ -1.67
LSM5-203ENST00000409782 ABCA11PQ4W5N1 156 aa4.64□□□□□ -1.67
LSM5-203ENST00000409782 ZNF506Q5JVG8 444 aa4.64□□□□□ -1.67
LSM5-203ENST00000409782 LY6G6FQ5SQ64 297 aa4.64□□□□□ -1.67
LSM5-203ENST00000409782 CD200R1LQ6Q8B3 271 aa4.64□□□□□ -1.67
LSM5-203ENST00000409782 TMEM91Q6ZNR0 172 aa4.64□□□□□ -1.67
LSM5-203ENST00000409782 SLC25A48Q6ZT89 311 aaKnown RBP4.64□□□□□ -1.67
LSM5-203ENST00000409782 C5orf56Q8N8D9 126 aa4.64□□□□□ -1.67
LSM5-203ENST00000409782 Q8NBF4 154 aa4.64□□□□□ -1.67
LSM5-203ENST00000409782 ZNF439Q8NDP4 499 aa4.64□□□□□ -1.67
LSM5-203ENST00000409782 OR4X2Q8NGF9 303 aa4.64□□□□□ -1.67
LSM5-203ENST00000409782 OR4K15Q8NH41 348 aa4.64□□□□□ -1.67
LSM5-203ENST00000409782 OR1L1Q8NH94 360 aa4.64□□□□□ -1.67
LSM5-203ENST00000409782 UBALD1Q8TB05 177 aa4.64□□□□□ -1.67
LSM5-203ENST00000409782 MRPL30Q8TCC3 161 aaKnown RBP4.64□□□□□ -1.67
LSM5-203ENST00000409782 TCTEX1D2Q8WW35 142 aa4.64□□□□□ -1.67
LSM5-203ENST00000409782 RTN4IP1Q8WWV3 396 aaPredicted RBP4.64□□□□□ -1.67
LSM5-203ENST00000409782 TMEM203Q969S6 136 aa4.64□□□□□ -1.67
LSM5-203ENST00000409782 CHCHD5Q9BSY4 110 aa4.64□□□□□ -1.67
LSM5-203ENST00000409782 PLGRKTQ9HBL7 147 aa4.64□□□□□ -1.67
LSM5-203ENST00000409782 TAF9BQ9HBM6 251 aa4.64□□□□□ -1.67
LSM5-203ENST00000409782 C12orf4Q9NQ89 552 aa4.64□□□□□ -1.67
LSM5-203ENST00000409782 NDUFB11Q9NX14 153 aa4.64□□□□□ -1.67
LSM5-203ENST00000409782 LRRC42Q9Y546 428 aa4.64□□□□□ -1.67
LSM5-203ENST00000409782 TRBV6-6A0A0A6YYG2 114 aa4.63□□□□□ -1.67
LSM5-203ENST00000409782 IGHV3-43A0A0B4J1X8 118 aa4.63□□□□□ -1.67
LSM5-203ENST00000409782 TRAV1-2A0A0B4J238 106 aa4.63□□□□□ -1.67
LSM5-203ENST00000409782 LOC100131303A0A0U1RQF7 123 aa4.63□□□□□ -1.67
LSM5-203ENST00000409782 PDCD5O14737 125 aa4.63□□□□□ -1.67
LSM5-203ENST00000409782 SLC31A2O15432 143 aa4.63□□□□□ -1.67
LSM5-203ENST00000409782 YPEL1O60688 119 aa4.63□□□□□ -1.67
LSM5-203ENST00000409782 ATP5LO75964 103 aa4.63□□□□□ -1.67
LSM5-203ENST00000409782 NAPSAO96009 420 aa4.63□□□□□ -1.67
LSM5-203ENST00000409782 MOSP00540 346 aa4.63□□□□□ -1.67
LSM5-203ENST00000409782 IGHV3-43DP0DP04 118 aa4.63□□□□□ -1.67
LSM5-203ENST00000409782 CD28P10747 220 aa4.63□□□□□ -1.67
LSM5-203ENST00000409782 MYL9P24844 172 aa4.63□□□□□ -1.67
LSM5-203ENST00000409782 CD1BP29016 333 aa4.63□□□□□ -1.67
LSM5-203ENST00000409782 FGF9P31371 208 aaPredicted RBP4.63□□□□□ -1.67
LSM5-203ENST00000409782 CDKN1BP46527 198 aa4.63□□□□□ -1.67
LSM5-203ENST00000409782 REG1BP48304 166 aa4.63□□□□□ -1.67
LSM5-203ENST00000409782 FABP5Q01469 135 aa4.63□□□□□ -1.67
LSM5-203ENST00000409782 EMX1Q04741 257 aaPredicted RBP4.63□□□□□ -1.67
LSM5-203ENST00000409782 DIAPH2-AS1Q14236 149 aa4.63□□□□□ -1.67
LSM5-203ENST00000409782 HES1Q14469 280 aa4.63□□□□□ -1.67
LSM5-203ENST00000409782 GNMTQ14749 295 aa4.63□□□□□ -1.67
LSM5-203ENST00000409782 SSX1Q16384 188 aa4.63□□□□□ -1.67
LSM5-203ENST00000409782 CT45A1Q5HYN5 189 aa4.63□□□□□ -1.67
LSM5-203ENST00000409782 UBE2UQ5VVX9 321 aa4.63□□□□□ -1.67
LSM5-203ENST00000409782 OR10K2Q6IF99 312 aa4.63□□□□□ -1.67
LSM5-203ENST00000409782 ZNF880Q6PDB4 577 aa4.63□□□□□ -1.67
LSM5-203ENST00000409782 SSX9Q7RTT3 188 aa4.63□□□□□ -1.67
LSM5-203ENST00000409782 C6orf201Q7Z4U5 140 aa4.63□□□□□ -1.67
LSM5-203ENST00000409782 Q8N6K4 173 aa4.63□□□□□ -1.67
LSM5-203ENST00000409782 CSNK1G2-AS1Q8NCQ2 148 aa4.63□□□□□ -1.67
LSM5-203ENST00000409782 BPIFCQ8NFQ6 507 aa4.63□□□□□ -1.67
LSM5-203ENST00000409782 OR1L6Q8NGR2 347 aa4.63□□□□□ -1.67
LSM5-203ENST00000409782 OR2T10Q8NGZ9 312 aa4.63□□□□□ -1.67
LSM5-203ENST00000409782 CT45A3Q8NHU0 189 aa4.63□□□□□ -1.67
LSM5-203ENST00000409782 GALMQ96C23 342 aa4.63□□□□□ -1.67
LSM5-203ENST00000409782 YPEL2Q96QA6 119 aa4.63□□□□□ -1.67
LSM5-203ENST00000409782 OPRPNQ99935 248 aaPredicted RBP4.63□□□□□ -1.67
LSM5-203ENST00000409782 SULT4A1Q9BR01 284 aa4.63□□□□□ -1.67
LSM5-203ENST00000409782 NICN1Q9BSH3 213 aa4.63□□□□□ -1.67
LSM5-203ENST00000409782 YTHDF1Q9BYJ9 559 aaKnown RBP4.63□□□□□ -1.67
LSM5-203ENST00000409782 LPAR5Q9H1C0 372 aa4.63□□□□□ -1.67
LSM5-203ENST00000409782 OR2S2Q9NQN1 319 aa4.63□□□□□ -1.67
LSM5-203ENST00000409782 ABRACLQ9P1F3 81 aa4.63□□□□□ -1.67
LSM5-203ENST00000409782 V9GY05 133 aa4.63□□□□□ -1.67
LSM5-203ENST00000409782 TRDV1A0A1B0GX56 115 aa4.62□□□□□ -1.67
LSM5-203ENST00000409782 SMCO3A2RU48 225 aa4.62□□□□□ -1.67
LSM5-203ENST00000409782 PSMB11A5LHX3 300 aa4.62□□□□□ -1.67
LSM5-203ENST00000409782 EPM2AB3EWF7 344 aa4.62□□□□□ -1.67
LSM5-203ENST00000409782 ITGB1BP1O14713 200 aa4.62□□□□□ -1.67
LSM5-203ENST00000409782 DENRO43583 198 aaKnown RBP4.62□□□□□ -1.67
LSM5-203ENST00000409782 DUS4LO95620 317 aaKnown RBP4.62□□□□□ -1.67
LSM5-203ENST00000409782 BLVRBP30043 206 aaPredicted RBP4.62□□□□□ -1.67
LSM5-203ENST00000409782 PPP1CCP36873 323 aaKnown RBP4.62□□□□□ -1.67
LSM5-203ENST00000409782 HLA-DRB3P79483 266 aa4.62□□□□□ -1.67
LSM5-203ENST00000409782 DEFA6Q01524 100 aa4.62□□□□□ -1.67
LSM5-203ENST00000409782 NSUN5P1Q3KNT7 163 aa4.62□□□□□ -1.67
LSM5-203ENST00000409782 MORN2Q502X0 79 aa4.62□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 65.3 ms