RNA–Protein interactions for RNA: ENST00000409531.5

TSPAN4-208, Transcript of tetraspanin 4, humanhuman

TSL 5 BASIC

Gene TSPAN4, Length 1,339 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-208ENST00000409531 SUB1P53999 127 aaKnown RBP eCLIP12.95□□□□□ -0.34
TSPAN4-208ENST00000409531 WT1-ASQ06250 92 aa12.95□□□□□ -0.34
TSPAN4-208ENST00000409531 C19orf54Q5BKX5 351 aa12.95□□□□□ -0.34
TSPAN4-208ENST00000409531 CENPVQ7Z7K6 275 aaPredicted RBP12.95□□□□□ -0.34
TSPAN4-208ENST00000409531 OR2C3Q8N628 320 aa12.95□□□□□ -0.34
TSPAN4-208ENST00000409531 FAM110DQ8TAY7 271 aaPredicted RBP12.95□□□□□ -0.34
TSPAN4-208ENST00000409531 RAB40CQ96S21 281 aa12.95□□□□□ -0.34
TSPAN4-208ENST00000409531 MAGT1Q9H0U3 335 aa12.95□□□□□ -0.34
TSPAN4-208ENST00000409531 PSMB11A5LHX3 300 aa12.94□□□□□ -0.34
TSPAN4-208ENST00000409531 CRYGCP07315 174 aa12.94□□□□□ -0.34
TSPAN4-208ENST00000409531 CTRB1P17538 263 aa12.94□□□□□ -0.34
TSPAN4-208ENST00000409531 HTR2BP41595 481 aa12.94□□□□□ -0.34
TSPAN4-208ENST00000409531 BCAP31P51572 246 aa12.94□□□□□ -0.34
TSPAN4-208ENST00000409531 S100A10P60903 97 aa12.94□□□□□ -0.34
TSPAN4-208ENST00000409531 RAP2BP61225 183 aa12.94□□□□□ -0.34
TSPAN4-208ENST00000409531 POLR2GP62487 172 aaKnown RBP eCLIP12.94□□□□□ -0.34
TSPAN4-208ENST00000409531 RPP30P78346 268 aaKnown RBP12.94□□□□□ -0.34
TSPAN4-208ENST00000409531 RAB32Q13637 225 aa12.94□□□□□ -0.34
TSPAN4-208ENST00000409531 ASPHD1Q5U4P2 390 aa12.94□□□□□ -0.34
TSPAN4-208ENST00000409531 CTRB2Q6GPI1 263 aa12.94□□□□□ -0.34
TSPAN4-208ENST00000409531 NOXA1Q86UR1 476 aa12.94□□□□□ -0.34
TSPAN4-208ENST00000409531 COMMD1Q8N668 190 aa12.94□□□□□ -0.34
TSPAN4-208ENST00000409531 OR1L6Q8NGR2 347 aa12.94□□□□□ -0.34
TSPAN4-208ENST00000409531 CHAC2Q8WUX2 184 aa12.94□□□□□ -0.34
TSPAN4-208ENST00000409531 PPP1R1CQ8WVI7 109 aa12.94□□□□□ -0.34
TSPAN4-208ENST00000409531 WNT10AQ9GZT5 417 aa12.94□□□□□ -0.34
TSPAN4-208ENST00000409531 LSM5Q9Y4Y9 91 aaKnown RBP12.94□□□□□ -0.34
TSPAN4-208ENST00000409531 U3KQ87 197 aa12.94□□□□□ -0.34
TSPAN4-208ENST00000409531 H3BUA1 57 aa12.93□□□□□ -0.34
TSPAN4-208ENST00000409531 K7EPK0 472 aa12.93□□□□□ -0.34
TSPAN4-208ENST00000409531 SSSCA1O60232 199 aa12.93□□□□□ -0.34
TSPAN4-208ENST00000409531 FBXO24O75426 580 aa12.93□□□□□ -0.34
TSPAN4-208ENST00000409531 DEFA4P12838 97 aa12.93□□□□□ -0.34
TSPAN4-208ENST00000409531 PPIFP30405 207 aaKnown RBP12.93□□□□□ -0.34
TSPAN4-208ENST00000409531 ATP5IP56385 69 aaPredicted RBP12.93□□□□□ -0.34
TSPAN4-208ENST00000409531 TAS2R30P59541 319 aa12.93□□□□□ -0.34
TSPAN4-208ENST00000409531 FGL1Q08830 312 aa12.93□□□□□ -0.34
TSPAN4-208ENST00000409531 ZNF114Q8NC26 417 aa12.93□□□□□ -0.34
TSPAN4-208ENST00000409531 A0A1B0GVG6 124 aa12.92□□□□□ -0.34
TSPAN4-208ENST00000409531 L7N2F9 121 aa12.92□□□□□ -0.34
TSPAN4-208ENST00000409531 IGHG4P01861 327 aa12.92□□□□□ -0.34
TSPAN4-208ENST00000409531 REG1AP05451 166 aa12.92□□□□□ -0.34
TSPAN4-208ENST00000409531 IAPPP10997 89 aa12.92□□□□□ -0.34
TSPAN4-208ENST00000409531 VAMP2P63027 116 aa12.92□□□□□ -0.34
TSPAN4-208ENST00000409531 CFHR3Q02985 330 aa12.92□□□□□ -0.34
TSPAN4-208ENST00000409531 LRRC37A5PQ49AS3 106 aa12.92□□□□□ -0.34
TSPAN4-208ENST00000409531 PRR31Q5SQ13 230 aa12.92□□□□□ -0.34
TSPAN4-208ENST00000409531 TEX38Q6PEX7 206 aa12.92□□□□□ -0.34
TSPAN4-208ENST00000409531 OR5T1Q8NG75 326 aa12.92□□□□□ -0.34
TSPAN4-208ENST00000409531 OR1P1Q8NH06 330 aa12.92□□□□□ -0.34
TSPAN4-208ENST00000409531 SMIM8Q96KF7 97 aa12.92□□□□□ -0.34
TSPAN4-208ENST00000409531 ZNF355PQ9NSJ1 428 aa12.92□□□□□ -0.34
TSPAN4-208ENST00000409531 RCL1Q9Y2P8 373 aaKnown RBP12.92□□□□□ -0.34
TSPAN4-208ENST00000409531 F11RQ9Y624 299 aaKnown RBP12.92□□□□□ -0.34
TSPAN4-208ENST00000409531 DEDDO75618 318 aa12.91□□□□□ -0.34
TSPAN4-208ENST00000409531 BRI3O95415 125 aa12.91□□□□□ -0.34
TSPAN4-208ENST00000409531 MPC2O95563 127 aa12.91□□□□□ -0.34
TSPAN4-208ENST00000409531 IFNA10P01566 189 aa12.91□□□□□ -0.34
TSPAN4-208ENST00000409531 ELANEP08246 267 aa12.91□□□□□ -0.34
TSPAN4-208ENST00000409531 HIST1H1BP16401 226 aaKnown RBP12.91□□□□□ -0.34
TSPAN4-208ENST00000409531 RPL23AP62750 156 aaKnown RBP12.91□□□□□ -0.34
TSPAN4-208ENST00000409531 CD83Q01151 205 aa12.91□□□□□ -0.34
TSPAN4-208ENST00000409531 TMEM65Q6PI78 240 aa12.91□□□□□ -0.34
TSPAN4-208ENST00000409531 ZNF329Q86UD4 541 aa12.91□□□□□ -0.34
TSPAN4-208ENST00000409531 KLHDC1Q8N7A1 406 aa12.91□□□□□ -0.34
TSPAN4-208ENST00000409531 SLC24A4Q8NFF2 622 aa12.91□□□□□ -0.34
TSPAN4-208ENST00000409531 OR4X2Q8NGF9 303 aa12.91□□□□□ -0.34
TSPAN4-208ENST00000409531 SLA2Q9H6Q3 261 aa12.91□□□□□ -0.34
TSPAN4-208ENST00000409531 PSENENQ9NZ42 101 aa12.91□□□□□ -0.34
TSPAN4-208ENST00000409531 THYN1Q9P016 225 aa12.91□□□□□ -0.34
TSPAN4-208ENST00000409531 CORTO00230 105 aa12.9□□□□□ -0.34
TSPAN4-208ENST00000409531 TSC22D2O75157 780 aa12.9□□□□□ -0.34
TSPAN4-208ENST00000409531 IGLV1-40P01703 118 aa12.9□□□□□ -0.34
TSPAN4-208ENST00000409531 NPY1RP25929 384 aa12.9□□□□□ -0.34
TSPAN4-208ENST00000409531 FOXE3Q13461 319 aa12.9□□□□□ -0.34
TSPAN4-208ENST00000409531 BSXQ3C1V8 233 aa12.9□□□□□ -0.34
TSPAN4-208ENST00000409531 C2orf83Q53S99 150 aa12.9□□□□□ -0.34
TSPAN4-208ENST00000409531 OR5AU1Q8NGC0 362 aa12.9□□□□□ -0.34
TSPAN4-208ENST00000409531 THAP6Q8TBB0 222 aa12.9□□□□□ -0.34
TSPAN4-208ENST00000409531 P2RX4Q99571 388 aa12.9□□□□□ -0.34
TSPAN4-208ENST00000409531 STRAPQ9Y3F4 350 aaKnown RBP12.9□□□□□ -0.34
TSPAN4-208ENST00000409531 E5RGE8 158 aa12.89□□□□□ -0.35
TSPAN4-208ENST00000409531 SOX15O60248 233 aa12.89□□□□□ -0.35
TSPAN4-208ENST00000409531 CCNKO75909 580 aa12.89□□□□□ -0.35
TSPAN4-208ENST00000409531 RNASE2P10153 161 aaKnown RBP12.89□□□□□ -0.35
TSPAN4-208ENST00000409531 PF4V1P10720 104 aa12.89□□□□□ -0.35
TSPAN4-208ENST00000409531 RAB11AP62491 216 aa12.89□□□□□ -0.35
TSPAN4-208ENST00000409531 SLC25A24Q6NUK1 477 aa12.89□□□□□ -0.35
TSPAN4-208ENST00000409531 OR2T35Q8NGX2 323 aa12.89□□□□□ -0.35
TSPAN4-208ENST00000409531 WDR89Q96FK6 387 aaPredicted RBP12.89□□□□□ -0.35
TSPAN4-208ENST00000409531 M0QZ24 198 aa12.88□□□□□ -0.35
TSPAN4-208ENST00000409531 SCAF4O95104 1147 aaKnown RBP12.88□□□□□ -0.35
TSPAN4-208ENST00000409531 PSMB8P28062 276 aa12.88□□□□□ -0.35
TSPAN4-208ENST00000409531 KLK9Q2XQG4 91 aa12.88□□□□□ -0.35
TSPAN4-208ENST00000409531 SPANXN5Q5MJ07 72 aa12.88□□□□□ -0.35
TSPAN4-208ENST00000409531 PRSS54Q6PEW0 395 aa12.88□□□□□ -0.35
TSPAN4-208ENST00000409531 AKAP14Q86UN6 197 aa12.88□□□□□ -0.35
TSPAN4-208ENST00000409531 NECAP1Q8NC96 275 aa12.88□□□□□ -0.35
TSPAN4-208ENST00000409531 WIPF2Q8TF74 440 aaPredicted RBP12.88□□□□□ -0.35
TSPAN4-208ENST00000409531 KLK9Q9UKQ9 250 aa12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms