RNA–Protein interactions for RNA: ENST00000409402.8

SPIRE1-202, Transcript of spire type actin nucleation factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SPIRE1, Length 5,665 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIRE1-202ENST00000409402 TNFRSF14Q92956 283 aa20.93■□□□□ 0.94
SPIRE1-202ENST00000409402 ZNF646O15015 1829 aaPredicted RBP20.93■□□□□ 0.94
SPIRE1-202ENST00000409402 GGCTO75223 188 aaKnown RBP20.93■□□□□ 0.94
SPIRE1-202ENST00000409402 NEUROG3Q9Y4Z2 214 aa20.93■□□□□ 0.94
SPIRE1-202ENST00000409402 TRGC2P03986 189 aa20.93■□□□□ 0.94
SPIRE1-202ENST00000409402 PAX1P15863 534 aa20.93■□□□□ 0.94
SPIRE1-202ENST00000409402 STHQ8IWL8 128 aa20.93■□□□□ 0.94
SPIRE1-202ENST00000409402 SMIM6P0DI80 62 aa20.93■□□□□ 0.94
SPIRE1-202ENST00000409402 LBHQ53QV2 105 aaPredicted RBP20.93■□□□□ 0.94
SPIRE1-202ENST00000409402 ZNF385CQ66K41 422 aaPredicted RBP20.93■□□□□ 0.94
SPIRE1-202ENST00000409402 CGAP01215 116 aa20.92■□□□□ 0.94
SPIRE1-202ENST00000409402 CD24P25063 80 aa20.92■□□□□ 0.94
SPIRE1-202ENST00000409402 FGFBP3Q8TAT2 258 aa20.92■□□□□ 0.94
SPIRE1-202ENST00000409402 TRBV9A0A0B4J1U6 114 aa20.92■□□□□ 0.94
SPIRE1-202ENST00000409402 LDLRAD2Q5SZI1 272 aa20.92■□□□□ 0.94
SPIRE1-202ENST00000409402 HTN3P15516 51 aa20.92■□□□□ 0.94
SPIRE1-202ENST00000409402 TMEM70Q9BUB7 260 aa20.92■□□□□ 0.94
SPIRE1-202ENST00000409402 SRIP30626 198 aa20.92■□□□□ 0.94
SPIRE1-202ENST00000409402 RNASE4P34096 147 aaKnown RBP20.91■□□□□ 0.94
SPIRE1-202ENST00000409402 EMP1P54849 157 aa20.91■□□□□ 0.94
SPIRE1-202ENST00000409402 HBBP68871 147 aa20.91■□□□□ 0.94
SPIRE1-202ENST00000409402 GTF3AQ92664 365 aaKnown RBP20.91■□□□□ 0.94
SPIRE1-202ENST00000409402 MDS2Q8NDY4 140 aa20.91■□□□□ 0.94
SPIRE1-202ENST00000409402 PDCD11Q14690 1871 aaKnown RBP20.91■□□□□ 0.94
SPIRE1-202ENST00000409402 TIMM23O14925 209 aa20.91■□□□□ 0.94
SPIRE1-202ENST00000409402 ZNF383Q8NA42 475 aa20.91■□□□□ 0.94
SPIRE1-202ENST00000409402 FMC1Q96HJ9 113 aa20.91■□□□□ 0.94
SPIRE1-202ENST00000409402 RCC1LQ96I51 464 aaKnown RBP20.91■□□□□ 0.94
SPIRE1-202ENST00000409402 SDF2L1Q9HCN8 221 aa20.91■□□□□ 0.94
SPIRE1-202ENST00000409402 TFF1P04155 84 aa20.91■□□□□ 0.94
SPIRE1-202ENST00000409402 FHITP49789 147 aa20.91■□□□□ 0.94
SPIRE1-202ENST00000409402 TRGV2A0A075B6R0 118 aa20.9■□□□□ 0.94
SPIRE1-202ENST00000409402 A0A0G2JNJ9 132 aa20.9■□□□□ 0.94
SPIRE1-202ENST00000409402 TMEM8BA6NDV4 472 aa20.9■□□□□ 0.94
SPIRE1-202ENST00000409402 TMEM250H0YL14 139 aa20.9■□□□□ 0.94
SPIRE1-202ENST00000409402 PEX7O00628 323 aa20.9■□□□□ 0.94
SPIRE1-202ENST00000409402 SUMO2P61956 95 aaKnown RBP20.9■□□□□ 0.94
SPIRE1-202ENST00000409402 RHOGP84095 191 aa20.9■□□□□ 0.94
SPIRE1-202ENST00000409402 Q9UFV3 132 aa20.9■□□□□ 0.94
SPIRE1-202ENST00000409402 H7C2G1 150 aa20.9■□□□□ 0.94
SPIRE1-202ENST00000409402 OR4D5Q8NGN0 318 aa20.9■□□□□ 0.94
SPIRE1-202ENST00000409402 C15orf61A6NNL5 157 aa20.9■□□□□ 0.94
SPIRE1-202ENST00000409402 NSUN5P1Q3KNT7 163 aa20.9■□□□□ 0.94
SPIRE1-202ENST00000409402 PVRIGQ6DKI7 326 aa20.9■□□□□ 0.94
SPIRE1-202ENST00000409402 PRSS2P07478 247 aa20.9■□□□□ 0.94
SPIRE1-202ENST00000409402 PSMB11A5LHX3 300 aa20.89■□□□□ 0.94
SPIRE1-202ENST00000409402 CXorf65A6NEN9 183 aa20.89■□□□□ 0.94
SPIRE1-202ENST00000409402 CRYGSP22914 178 aa20.89■□□□□ 0.94
SPIRE1-202ENST00000409402 TMEM167AQ8TBQ9 72 aa20.89■□□□□ 0.94
SPIRE1-202ENST00000409402 ZMAT5Q9UDW3 170 aaKnown RBP20.89■□□□□ 0.94
SPIRE1-202ENST00000409402 IGKV1-9A0A0C4DH69 117 aa20.89■□□□□ 0.94
SPIRE1-202ENST00000409402 EFNA2O43921 213 aa20.89■□□□□ 0.93
SPIRE1-202ENST00000409402 TGIF2-C20orf24A0A0A6YYL0 155 aa20.89■□□□□ 0.93
SPIRE1-202ENST00000409402 PMCHL1Q16048 86 aa20.89■□□□□ 0.93
SPIRE1-202ENST00000409402 CYB5R2Q6BCY4 276 aa20.88■□□□□ 0.93
SPIRE1-202ENST00000409402 FAM166AQ6J272 317 aa20.88■□□□□ 0.93
SPIRE1-202ENST00000409402 CHD5Q8TDI0 1954 aa20.88■□□□□ 0.93
SPIRE1-202ENST00000409402 PUSL1Q8N0Z8 303 aaKnown RBP20.88■□□□□ 0.93
SPIRE1-202ENST00000409402 C19orf67A6NJJ6 358 aa20.88■□□□□ 0.93
SPIRE1-202ENST00000409402 FBLN5Q9UBX5 448 aa20.88■□□□□ 0.93
SPIRE1-202ENST00000409402 SLC25A15Q9Y619 301 aa20.88■□□□□ 0.93
SPIRE1-202ENST00000409402 B4DSR2 109 aa20.88■□□□□ 0.93
SPIRE1-202ENST00000409402 MRPS16Q9Y3D3 137 aaKnown RBP20.88■□□□□ 0.93
SPIRE1-202ENST00000409402 TRAV14DV4A0A0A6YYC5 116 aa20.87■□□□□ 0.93
SPIRE1-202ENST00000409402 OR9G9P0C7N8 305 aa20.87■□□□□ 0.93
SPIRE1-202ENST00000409402 LEPP41159 167 aa20.87■□□□□ 0.93
SPIRE1-202ENST00000409402 SLC50A1Q9BRV3 221 aa20.87■□□□□ 0.93
SPIRE1-202ENST00000409402 ALKBH7Q9BT30 221 aaPredicted RBP20.87■□□□□ 0.93
SPIRE1-202ENST00000409402 VENTXO95231 258 aa20.87■□□□□ 0.93
SPIRE1-202ENST00000409402 FOXG1P55316 489 aaPredicted RBP20.87■□□□□ 0.93
SPIRE1-202ENST00000409402 Q6ZS92 163 aa20.87■□□□□ 0.93
SPIRE1-202ENST00000409402 SLC25A28Q96A46 364 aa20.87■□□□□ 0.93
SPIRE1-202ENST00000409402 CACNA1IQ9P0X4 2223 aa20.87■□□□□ 0.93
SPIRE1-202ENST00000409402 EGR1P18146 543 aa20.87■□□□□ 0.93
SPIRE1-202ENST00000409402 ZNF600Q6ZNG1 722 aa20.87■□□□□ 0.93
SPIRE1-202ENST00000409402 TMEM144Q7Z5S9 345 aa20.87■□□□□ 0.93
SPIRE1-202ENST00000409402 OR1P1Q8NH06 330 aa20.87■□□□□ 0.93
SPIRE1-202ENST00000409402 CACNA1EQ15878 2313 aa20.87■□□□□ 0.93
SPIRE1-202ENST00000409402 PKIAP61925 76 aa20.87■□□□□ 0.93
SPIRE1-202ENST00000409402 ZNF506Q5JVG8 444 aa20.87■□□□□ 0.93
SPIRE1-202ENST00000409402 FBLL1A6NHQ2 334 aaKnown RBP20.86■□□□□ 0.93
SPIRE1-202ENST00000409402 VMO1Q7Z5L0 202 aa20.86■□□□□ 0.93
SPIRE1-202ENST00000409402 Q9H3A6 140 aa20.86■□□□□ 0.93
SPIRE1-202ENST00000409402 ZNF25P17030 456 aaPredicted RBP20.86■□□□□ 0.93
SPIRE1-202ENST00000409402 GTSCR1Q86UQ5 136 aa20.86■□□□□ 0.93
SPIRE1-202ENST00000409402 CBY1Q9Y3M2 126 aa20.86■□□□□ 0.93
SPIRE1-202ENST00000409402 BMPERQ8N8U9 685 aa20.86■□□□□ 0.93
SPIRE1-202ENST00000409402 DUSP14O95147 198 aaKnown RBP20.86■□□□□ 0.93
SPIRE1-202ENST00000409402 FOLR2P14207 255 aa20.86■□□□□ 0.93
SPIRE1-202ENST00000409402 OR11H4Q8NGC9 324 aa20.86■□□□□ 0.93
SPIRE1-202ENST00000409402 MARVELD3Q96A59 401 aa20.86■□□□□ 0.93
SPIRE1-202ENST00000409402 DNLZQ5SXM8 178 aa20.85■□□□□ 0.93
SPIRE1-202ENST00000409402 THADAQ6YHU6 1953 aa20.85■□□□□ 0.93
SPIRE1-202ENST00000409402 KIAA1644Q3SXP7 199 aa20.85■□□□□ 0.93
SPIRE1-202ENST00000409402 MIR17HGQ75NE6 70 aa20.85■□□□□ 0.93
SPIRE1-202ENST00000409402 IGKV1D-13A0A0B4J2D9 117 aa20.85■□□□□ 0.93
SPIRE1-202ENST00000409402 IGKV1-13P0DP09 117 aa20.85■□□□□ 0.93
SPIRE1-202ENST00000409402 CIARTQ8N365 385 aaPredicted RBP20.85■□□□□ 0.93
SPIRE1-202ENST00000409402 SRRM5B3KS81 715 aa20.85■□□□□ 0.93
SPIRE1-202ENST00000409402 Q5BKY6 102 aa20.85■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms