RNA–Protein interactions for RNA: ENST00000407422.7

SMARCB1-204, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SMARCB1, Length 1,643 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-204ENST00000407422 F8W735 103 aaPredicted RBP14.47□□□□□ -0.09
SMARCB1-204ENST00000407422 CD3DP04234 171 aa14.47□□□□□ -0.09
SMARCB1-204ENST00000407422 C8orf88P0DMB2 117 aa14.47□□□□□ -0.09
SMARCB1-204ENST00000407422 PI3P19957 117 aa14.47□□□□□ -0.09
SMARCB1-204ENST00000407422 MRGPRFQ96AM1 343 aa14.47□□□□□ -0.09
SMARCB1-204ENST00000407422 TSC22D3Q99576 134 aa14.47□□□□□ -0.09
SMARCB1-204ENST00000407422 HIPK2Q9H2X6 1198 aa14.47□□□□□ -0.09
SMARCB1-204ENST00000407422 FKBP11Q9NYL4 201 aa14.47□□□□□ -0.09
SMARCB1-204ENST00000407422 K7EIM0 57 aa14.46□□□□□ -0.09
SMARCB1-204ENST00000407422 ZFAND6Q6FIF0 208 aa14.46□□□□□ -0.09
SMARCB1-204ENST00000407422 H2BFWTQ7Z2G1 175 aa14.46□□□□□ -0.09
SMARCB1-204ENST00000407422 ISOC1Q96CN7 298 aa14.46□□□□□ -0.09
SMARCB1-204ENST00000407422 TMEM56Q96MV1 263 aa14.46□□□□□ -0.09
SMARCB1-204ENST00000407422 CHRDL1Q9BU40 450 aa14.46□□□□□ -0.09
SMARCB1-204ENST00000407422 PALMDQ9NP74 551 aa14.46□□□□□ -0.09
SMARCB1-204ENST00000407422 C21orf62Q9NYP8 219 aa14.46□□□□□ -0.09
SMARCB1-204ENST00000407422 IFNA6P05013 189 aa14.45□□□□□ -0.1
SMARCB1-204ENST00000407422 IZUMO4Q1ZYL8 232 aa14.45□□□□□ -0.1
SMARCB1-204ENST00000407422 RNASE10Q5GAN6 216 aaKnown RBP14.45□□□□□ -0.1
SMARCB1-204ENST00000407422 LHFPL1Q86WI0 220 aa14.45□□□□□ -0.1
SMARCB1-204ENST00000407422 OR4D10Q8NGI6 311 aa14.45□□□□□ -0.1
SMARCB1-204ENST00000407422 TMEM190Q8WZ59 177 aa14.45□□□□□ -0.1
SMARCB1-204ENST00000407422 BSCL2Q96G97 398 aaPredicted RBP14.45□□□□□ -0.1
SMARCB1-204ENST00000407422 FAM110AQ9BQ89 295 aa14.45□□□□□ -0.1
SMARCB1-204ENST00000407422 MIXL1Q9H2W2 232 aa14.45□□□□□ -0.1
SMARCB1-204ENST00000407422 MTFP1Q9UDX5 166 aa14.45□□□□□ -0.1
SMARCB1-204ENST00000407422 UFC1Q9Y3C8 167 aa14.45□□□□□ -0.1
SMARCB1-204ENST00000407422 SLC16A13Q7RTY0 426 aa14.44□□□□□ -0.1
SMARCB1-204ENST00000407422 UBAC2Q8NBM4 344 aa14.44□□□□□ -0.1
SMARCB1-204ENST00000407422 OR52B4Q8NGK2 314 aa14.44□□□□□ -0.1
SMARCB1-204ENST00000407422 OR4A16Q8NH70 328 aa14.44□□□□□ -0.1
SMARCB1-204ENST00000407422 MARC2Q969Z3 335 aa14.44□□□□□ -0.1
SMARCB1-204ENST00000407422 MRPS26Q9BYN8 205 aaKnown RBP14.44□□□□□ -0.1
SMARCB1-204ENST00000407422 MRPL27Q9P0M9 148 aaKnown RBP14.44□□□□□ -0.1
SMARCB1-204ENST00000407422 IGHV3OR16-8A0A075B7F1 116 aa14.44□□□□□ -0.1
SMARCB1-204ENST00000407422 PGAM2P15259 253 aa14.44□□□□□ -0.1
SMARCB1-204ENST00000407422 ADMP35318 185 aa14.44□□□□□ -0.1
SMARCB1-204ENST00000407422 ALDH3B2P48448 385 aa14.44□□□□□ -0.1
SMARCB1-204ENST00000407422 ELLP55199 621 aaPredicted RBP14.44□□□□□ -0.1
SMARCB1-204ENST00000407422 OR1P1Q8NH06 330 aa14.44□□□□□ -0.1
SMARCB1-204ENST00000407422 GAR1Q9NY12 217 aaKnown RBP14.44□□□□□ -0.1
SMARCB1-204ENST00000407422 PIGPP57054 158 aa14.43□□□□□ -0.1
SMARCB1-204ENST00000407422 RND3P61587 244 aa14.43□□□□□ -0.1
SMARCB1-204ENST00000407422 SPCS2Q15005 226 aa14.43□□□□□ -0.1
SMARCB1-204ENST00000407422 SPSB3Q6PJ21 355 aa14.43□□□□□ -0.1
SMARCB1-204ENST00000407422 GPR141Q7Z602 305 aa14.43□□□□□ -0.1
SMARCB1-204ENST00000407422 ARRDC1Q8N5I2 433 aa14.43□□□□□ -0.1
SMARCB1-204ENST00000407422 OR2C3Q8N628 320 aa14.43□□□□□ -0.1
SMARCB1-204ENST00000407422 TP53RKQ96S44 253 aa14.43□□□□□ -0.1
SMARCB1-204ENST00000407422 CTDSP2O14595 271 aa14.42□□□□□ -0.1
SMARCB1-204ENST00000407422 IGKV1-5P01602 117 aa14.42□□□□□ -0.1
SMARCB1-204ENST00000407422 PPP5CP53041 499 aa14.42□□□□□ -0.1
SMARCB1-204ENST00000407422 Q56UQ5 140 aa14.42□□□□□ -0.1
SMARCB1-204ENST00000407422 SPINK9Q5DT21 86 aa14.42□□□□□ -0.1
SMARCB1-204ENST00000407422 RBPMS2Q6ZRY4 209 aaKnown RBP14.42□□□□□ -0.1
SMARCB1-204ENST00000407422 OR1L6Q8NGR2 347 aa14.42□□□□□ -0.1
SMARCB1-204ENST00000407422 ZNF486Q96H40 463 aaPredicted RBP14.42□□□□□ -0.1
SMARCB1-204ENST00000407422 ZNF414Q96IQ9 312 aa14.42□□□□□ -0.1
SMARCB1-204ENST00000407422 C20orf24Q9BUV8 137 aa14.42□□□□□ -0.1
SMARCB1-204ENST00000407422 DAZ1Q9NQZ3 744 aaKnown RBP14.42□□□□□ -0.1
SMARCB1-204ENST00000407422 RGS5O15539 181 aa14.41□□□□□ -0.1
SMARCB1-204ENST00000407422 ZNF207O43670 478 aaKnown RBP14.41□□□□□ -0.1
SMARCB1-204ENST00000407422 CTSGP08311 255 aa14.41□□□□□ -0.1
SMARCB1-204ENST00000407422 TBPP20226 339 aa14.41□□□□□ -0.1
SMARCB1-204ENST00000407422 HSPE1P61604 102 aaKnown RBP14.41□□□□□ -0.1
SMARCB1-204ENST00000407422 PRCDQ00LT1 54 aa14.41□□□□□ -0.1
SMARCB1-204ENST00000407422 MISP3Q96FF7 219 aa14.41□□□□□ -0.1
SMARCB1-204ENST00000407422 ATP6V0BQ99437 205 aa14.41□□□□□ -0.1
SMARCB1-204ENST00000407422 C5orf66Q9H5L9 145 aa14.41□□□□□ -0.1
SMARCB1-204ENST00000407422 TRAV25A0A0B4J276 109 aa14.41□□□□□ -0.1
SMARCB1-204ENST00000407422 I3L2K1 104 aa14.41□□□□□ -0.1
SMARCB1-204ENST00000407422 NDUFA4O00483 81 aa14.41□□□□□ -0.1
SMARCB1-204ENST00000407422 IGHV3-48P01763 117 aa14.41□□□□□ -0.1
SMARCB1-204ENST00000407422 CD74P04233 296 aa14.41□□□□□ -0.1
SMARCB1-204ENST00000407422 ANKRD55Q3KP44 614 aa14.4□□□□□ -0.1
SMARCB1-204ENST00000407422 SP6Q3SY56 376 aa14.4□□□□□ -0.1
SMARCB1-204ENST00000407422 SCGB2B2Q4G0G5 96 aa14.4□□□□□ -0.1
SMARCB1-204ENST00000407422 TMEM229BQ8NBD8 167 aa14.4□□□□□ -0.1
SMARCB1-204ENST00000407422 ZNF114Q8NC26 417 aa14.4□□□□□ -0.1
SMARCB1-204ENST00000407422 TERB2Q8NHR7 220 aa14.4□□□□□ -0.1
SMARCB1-204ENST00000407422 C15orf40Q8WUR7 153 aa14.4□□□□□ -0.1
SMARCB1-204ENST00000407422 A0A0B4J293 547 aa14.39□□□□□ -0.11
SMARCB1-204ENST00000407422 C3orf85A0A1B0GTC6 90 aa14.39□□□□□ -0.11
SMARCB1-204ENST00000407422 GABARAPH6UMI1 98 aa14.39□□□□□ -0.11
SMARCB1-204ENST00000407422 RAB3DO95716 219 aa14.39□□□□□ -0.11
SMARCB1-204ENST00000407422 P0C879 139 aa14.39□□□□□ -0.11
SMARCB1-204ENST00000407422 TAS2R19P59542 299 aa14.39□□□□□ -0.11
SMARCB1-204ENST00000407422 FAAP20Q6NZ36 180 aa14.39□□□□□ -0.11
SMARCB1-204ENST00000407422 OR13C8Q8NGS7 320 aa14.39□□□□□ -0.11
SMARCB1-204ENST00000407422 MT-CO2P00403 227 aa14.38□□□□□ -0.11
SMARCB1-204ENST00000407422 STEAP1BQ6NZ63 245 aa14.38□□□□□ -0.11
SMARCB1-204ENST00000407422 CLVS1Q8IUQ0 354 aaPredicted RBP14.38□□□□□ -0.11
SMARCB1-204ENST00000407422 MARCH1Q8TCQ1 289 aa14.38□□□□□ -0.11
SMARCB1-204ENST00000407422 COPZ2Q9P299 210 aa14.38□□□□□ -0.11
SMARCB1-204ENST00000407422 DNAH1Q9P2D7 4330 aa14.38□□□□□ -0.11
SMARCB1-204ENST00000407422 AKR1C2P52895 323 aa14.37□□□□□ -0.11
SMARCB1-204ENST00000407422 MFAP4P55083 255 aa14.37□□□□□ -0.11
SMARCB1-204ENST00000407422 PINX1Q96BK5 328 aaKnown RBP14.37□□□□□ -0.11
SMARCB1-204ENST00000407422 SPAG8Q99932 426 aaPredicted RBP14.37□□□□□ -0.11
SMARCB1-204ENST00000407422 UBQLN2Q9UHD9 624 aa14.37□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms