RNA–Protein interactions for RNA: ENST00000407082.3

SMARCB1-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 5 BASIC

Gene SMARCB1, Length 1,182 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-203ENST00000407082 ZNF726P1Q15940 193 aa10.5□□□□□ -0.73
SMARCB1-203ENST00000407082 SPRNQ5BIV9 151 aa10.5□□□□□ -0.73
SMARCB1-203ENST00000407082 FAM53AQ6NSI3 398 aaPredicted RBP10.5□□□□□ -0.73
SMARCB1-203ENST00000407082 HEPN1Q6WQI6 88 aa10.5□□□□□ -0.73
SMARCB1-203ENST00000407082 SSX9Q7RTT3 188 aa10.5□□□□□ -0.73
SMARCB1-203ENST00000407082 LINC00311Q8N616 119 aa10.5□□□□□ -0.73
SMARCB1-203ENST00000407082 VSTM2AQ8TAG5 236 aa10.5□□□□□ -0.73
SMARCB1-203ENST00000407082 TMEM186Q96B77 213 aa10.5□□□□□ -0.73
SMARCB1-203ENST00000407082 C20orf24Q9BUV8 137 aa10.5□□□□□ -0.73
SMARCB1-203ENST00000407082 TMEM14BQ9NUH8 114 aa10.5□□□□□ -0.73
SMARCB1-203ENST00000407082 TMEM106BQ9NUM4 274 aa10.5□□□□□ -0.73
SMARCB1-203ENST00000407082 BET1LQ9NYM9 111 aa10.5□□□□□ -0.73
SMARCB1-203ENST00000407082 KAAG1Q9UBP8 84 aa10.5□□□□□ -0.73
SMARCB1-203ENST00000407082 NAT8Q9UHE5 227 aa10.5□□□□□ -0.73
SMARCB1-203ENST00000407082 ANK2Q01484 3957 aa10.5□□□□□ -0.73
SMARCB1-203ENST00000407082 A0A096LNT2 108 aa10.49□□□□□ -0.73
SMARCB1-203ENST00000407082 IGHV1-69-2A0A0G2JMI3 117 aa10.49□□□□□ -0.73
SMARCB1-203ENST00000407082 ZNF727A8MUV8 499 aa10.49□□□□□ -0.73
SMARCB1-203ENST00000407082 LYNX1G3V0Z9 82 aa10.49□□□□□ -0.73
SMARCB1-203ENST00000407082 CLDN34H7C241 214 aa10.49□□□□□ -0.73
SMARCB1-203ENST00000407082 FSTL3O95633 263 aa10.49□□□□□ -0.73
SMARCB1-203ENST00000407082 LYNX1P0DP58 116 aa10.49□□□□□ -0.73
SMARCB1-203ENST00000407082 COL8A2P25067 703 aa10.49□□□□□ -0.73
SMARCB1-203ENST00000407082 NPY1RP25929 384 aa10.49□□□□□ -0.73
SMARCB1-203ENST00000407082 HOXA4Q00056 320 aaPredicted RBP10.49□□□□□ -0.73
SMARCB1-203ENST00000407082 OR4A47Q6IF82 309 aa10.49□□□□□ -0.73
SMARCB1-203ENST00000407082 MRPL41Q8IXM3 137 aaKnown RBP10.49□□□□□ -0.73
SMARCB1-203ENST00000407082 RPP25LQ8N5L8 163 aaKnown RBP10.49□□□□□ -0.73
SMARCB1-203ENST00000407082 OR5B3Q8NH48 314 aa10.49□□□□□ -0.73
SMARCB1-203ENST00000407082 FAM168AQ92567 244 aa10.49□□□□□ -0.73
SMARCB1-203ENST00000407082 C1orf159Q96HA4 380 aa10.49□□□□□ -0.73
SMARCB1-203ENST00000407082 BTF3L4Q96K17 158 aa10.49□□□□□ -0.73
SMARCB1-203ENST00000407082 TCEAL7Q9BRU2 100 aa10.49□□□□□ -0.73
SMARCB1-203ENST00000407082 VSIRQ9H7M9 311 aa10.49□□□□□ -0.73
SMARCB1-203ENST00000407082 OR51B2Q9Y5P1 312 aa10.49□□□□□ -0.73
SMARCB1-203ENST00000407082 TRBV23-1A0A0A0MS06 115 aa10.48□□□□□ -0.73
SMARCB1-203ENST00000407082 F6UZH7 168 aa10.48□□□□□ -0.73
SMARCB1-203ENST00000407082 UPK2O00526 184 aa10.48□□□□□ -0.73
SMARCB1-203ENST00000407082 SLC31A2O15432 143 aa10.48□□□□□ -0.73
SMARCB1-203ENST00000407082 TCF21O43680 179 aa10.48□□□□□ -0.73
SMARCB1-203ENST00000407082 PDE6DO43924 150 aa10.48□□□□□ -0.73
SMARCB1-203ENST00000407082 KBTBD11O94819 623 aa10.48□□□□□ -0.73
SMARCB1-203ENST00000407082 OPN1MWP04001 364 aa10.48□□□□□ -0.73
SMARCB1-203ENST00000407082 OPN1MW2P0DN77 364 aa10.48□□□□□ -0.73
SMARCB1-203ENST00000407082 OPN1MW3P0DN78 364 aa10.48□□□□□ -0.73
SMARCB1-203ENST00000407082 SLC25A16P16260 332 aa10.48□□□□□ -0.73
SMARCB1-203ENST00000407082 USF1P22415 310 aaPredicted RBP10.48□□□□□ -0.73
SMARCB1-203ENST00000407082 FGF8P55075 233 aaPredicted RBP10.48□□□□□ -0.73
SMARCB1-203ENST00000407082 HNF4GQ14541 408 aa10.48□□□□□ -0.73
SMARCB1-203ENST00000407082 TMEM241Q24JQ0 296 aa10.48□□□□□ -0.73
SMARCB1-203ENST00000407082 FAM201AQ5SY85 155 aa10.48□□□□□ -0.73
SMARCB1-203ENST00000407082 ACSM6Q6P461 480 aa10.48□□□□□ -0.73
SMARCB1-203ENST00000407082 ZNF833PQ6ZTB9 187 aa10.48□□□□□ -0.73
SMARCB1-203ENST00000407082 FAM24BQ8N5W8 94 aa10.48□□□□□ -0.73
SMARCB1-203ENST00000407082 FAM216BQ8N7L0 139 aa10.48□□□□□ -0.73
SMARCB1-203ENST00000407082 ZNF383Q8NA42 475 aa10.48□□□□□ -0.73
SMARCB1-203ENST00000407082 SLC24A4Q8NFF2 622 aa10.48□□□□□ -0.73
SMARCB1-203ENST00000407082 OR13D1Q8NGV5 346 aa10.48□□□□□ -0.73
SMARCB1-203ENST00000407082 CCL17Q92583 94 aa10.48□□□□□ -0.73
SMARCB1-203ENST00000407082 RAB24Q969Q5 203 aa10.48□□□□□ -0.73
SMARCB1-203ENST00000407082 PCGF1Q9BSM1 259 aa10.48□□□□□ -0.73
SMARCB1-203ENST00000407082 PLEKHA3Q9HB20 300 aa10.48□□□□□ -0.73
SMARCB1-203ENST00000407082 SDF2L1Q9HCN8 221 aa10.48□□□□□ -0.73
SMARCB1-203ENST00000407082 MEGF8Q7Z7M0 2845 aa10.48□□□□□ -0.73
SMARCB1-203ENST00000407082 YLPM1P49750 1951 aaKnown RBP10.48□□□□□ -0.73
SMARCB1-203ENST00000407082 MALRD1Q5VYJ5 2156 aa10.48□□□□□ -0.73
SMARCB1-203ENST00000407082 A0A1W2PN81 502 aa10.47□□□□□ -0.73
SMARCB1-203ENST00000407082 J3QR06 171 aa10.47□□□□□ -0.73
SMARCB1-203ENST00000407082 VENTXO95231 258 aa10.47□□□□□ -0.73
SMARCB1-203ENST00000407082 CXorf1O96002 111 aa10.47□□□□□ -0.73
SMARCB1-203ENST00000407082 S100A8P05109 93 aa10.47□□□□□ -0.73
SMARCB1-203ENST00000407082 MC5RP33032 325 aa10.47□□□□□ -0.73
SMARCB1-203ENST00000407082 CHRNA7P36544 502 aa10.47□□□□□ -0.73
SMARCB1-203ENST00000407082 AKR1C3P42330 323 aa10.47□□□□□ -0.73
SMARCB1-203ENST00000407082 GNG10P50151 68 aa10.47□□□□□ -0.73
SMARCB1-203ENST00000407082 PDLIM4P50479 330 aa10.47□□□□□ -0.73
SMARCB1-203ENST00000407082 PRCDQ00LT1 54 aa10.47□□□□□ -0.73
SMARCB1-203ENST00000407082 FAM90A2PQ658T7 463 aa10.47□□□□□ -0.73
SMARCB1-203ENST00000407082 TEPPQ6URK8 271 aa10.47□□□□□ -0.73
SMARCB1-203ENST00000407082 PDPNQ86YL7 162 aa10.47□□□□□ -0.73
SMARCB1-203ENST00000407082 ZNF596Q8TC21 504 aa10.47□□□□□ -0.73
SMARCB1-203ENST00000407082 TNFRSF14Q92956 283 aa10.47□□□□□ -0.73
SMARCB1-203ENST00000407082 MGAM2Q2M2H8 2515 aa10.46□□□□□ -0.73
SMARCB1-203ENST00000407082 A0A1W2PPE2 198 aa10.46□□□□□ -0.73
SMARCB1-203ENST00000407082 S100A9P06702 114 aaKnown RBP10.46□□□□□ -0.73
SMARCB1-203ENST00000407082 IL6RP08887 468 aaPredicted RBP10.46□□□□□ -0.73
SMARCB1-203ENST00000407082 SELLP14151 372 aa10.46□□□□□ -0.73
SMARCB1-203ENST00000407082 S100PP25815 95 aa10.46□□□□□ -0.73
SMARCB1-203ENST00000407082 RPL29P47914 159 aaKnown RBP10.46□□□□□ -0.73
SMARCB1-203ENST00000407082 SUB1P53999 127 aaKnown RBP eCLIP10.46□□□□□ -0.73
SMARCB1-203ENST00000407082 RHOBP62745 196 aa10.46□□□□□ -0.73
SMARCB1-203ENST00000407082 ERHP84090 104 aaKnown RBP10.46□□□□□ -0.73
SMARCB1-203ENST00000407082 SSX2Q16385 188 aa10.46□□□□□ -0.73
SMARCB1-203ENST00000407082 TMEM177Q53S58 311 aa10.46□□□□□ -0.73
SMARCB1-203ENST00000407082 TREML4Q6UXN2 200 aa10.46□□□□□ -0.73
SMARCB1-203ENST00000407082 CYP2G1PQ6ZSU1 146 aa10.46□□□□□ -0.73
SMARCB1-203ENST00000407082 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP10.46□□□□□ -0.73
SMARCB1-203ENST00000407082 H1FXQ92522 213 aaKnown RBP10.46□□□□□ -0.73
SMARCB1-203ENST00000407082 ANAPC16Q96DE5 110 aa10.46□□□□□ -0.73
SMARCB1-203ENST00000407082 SMIM7Q9BQ49 75 aa10.46□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms