RNA–Protein interactions for RNA: ENST00000403495.2

HMGB1P17-201, Transcript of high mobility group box 1 pseudogene 17, humanhuman

BASIC

Gene HMGB1P17, Length 628 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P17-201ENST00000403495 CCL20P78556 96 aa1.65□□□□□ -2.15
HMGB1P17-201ENST00000403495 SS18Q15532 418 aa1.65□□□□□ -2.15
HMGB1P17-201ENST00000403495 IBA57Q5T440 356 aaKnown RBP1.65□□□□□ -2.15
HMGB1P17-201ENST00000403495 AADACL3Q5VUY0 350 aa1.65□□□□□ -2.15
HMGB1P17-201ENST00000403495 RPL22L1Q6P5R6 122 aaKnown RBP1.65□□□□□ -2.15
HMGB1P17-201ENST00000403495 ZNF705AQ6ZN79 300 aaPredicted RBP1.65□□□□□ -2.15
HMGB1P17-201ENST00000403495 ZNF767PQ75MW2 155 aa1.65□□□□□ -2.15
HMGB1P17-201ENST00000403495 OR13C4Q8NGS5 318 aa1.65□□□□□ -2.15
HMGB1P17-201ENST00000403495 OR13C6PQ8NH95 151 aa1.65□□□□□ -2.15
HMGB1P17-201ENST00000403495 SLC7A6Q92536 515 aa1.65□□□□□ -2.15
HMGB1P17-201ENST00000403495 GPR146Q96CH1 333 aa1.65□□□□□ -2.15
HMGB1P17-201ENST00000403495 TP73-AS1Q9UF72 201 aa1.65□□□□□ -2.15
HMGB1P17-201ENST00000403495 PYCARDQ9ULZ3 195 aa1.65□□□□□ -2.15
HMGB1P17-201ENST00000403495 CYSLTR1Q9Y271 337 aa1.65□□□□□ -2.15
HMGB1P17-201ENST00000403495 A0A0J9YW62 118 aa1.64□□□□□ -2.15
HMGB1P17-201ENST00000403495 H0YJX3 145 aa1.64□□□□□ -2.15
HMGB1P17-201ENST00000403495 CREBL2O60519 120 aaPredicted RBP1.64□□□□□ -2.15
HMGB1P17-201ENST00000403495 IFNA10P01566 189 aa1.64□□□□□ -2.15
HMGB1P17-201ENST00000403495 IGKV1-5P01602 117 aa1.64□□□□□ -2.15
HMGB1P17-201ENST00000403495 C1QAP02745 245 aa1.64□□□□□ -2.15
HMGB1P17-201ENST00000403495 SMIM17P0DL12 118 aa1.64□□□□□ -2.15
HMGB1P17-201ENST00000403495 MSNP26038 577 aaKnown RBP1.64□□□□□ -2.15
HMGB1P17-201ENST00000403495 CRYBA4P53673 196 aa1.64□□□□□ -2.15
HMGB1P17-201ENST00000403495 KRTAP12-1P59990 96 aa1.64□□□□□ -2.15
HMGB1P17-201ENST00000403495 HIST1H4AP62805 103 aaKnown RBP1.64□□□□□ -2.15
HMGB1P17-201ENST00000403495 RPL18Q07020 188 aaKnown RBP1.64□□□□□ -2.15
HMGB1P17-201ENST00000403495 MOGQ16653 247 aa1.64□□□□□ -2.15
HMGB1P17-201ENST00000403495 C3orf33Q6P1S2 294 aa1.64□□□□□ -2.15
HMGB1P17-201ENST00000403495 Q6ZS52 159 aa1.64□□□□□ -2.15
HMGB1P17-201ENST00000403495 SMIM15Q7Z3B0 74 aa1.64□□□□□ -2.15
HMGB1P17-201ENST00000403495 LHFPL1Q86WI0 220 aa1.64□□□□□ -2.15
HMGB1P17-201ENST00000403495 SMIM20Q8N5G0 67 aa1.64□□□□□ -2.15
HMGB1P17-201ENST00000403495 SLC25A40Q8TBP6 338 aa1.64□□□□□ -2.15
HMGB1P17-201ENST00000403495 H1FXQ92522 213 aaKnown RBP1.64□□□□□ -2.15
HMGB1P17-201ENST00000403495 DERL1Q9BUN8 251 aa1.64□□□□□ -2.15
HMGB1P17-201ENST00000403495 OR8D2Q9GZM6 311 aa1.64□□□□□ -2.15
HMGB1P17-201ENST00000403495 PCBD2Q9H0N5 130 aa1.64□□□□□ -2.15
HMGB1P17-201ENST00000403495 PARVBQ9HBI1 364 aa1.64□□□□□ -2.15
HMGB1P17-201ENST00000403495 UFC1Q9Y3C8 167 aa1.64□□□□□ -2.15
HMGB1P17-201ENST00000403495 RBM7Q9Y580 266 aaKnown RBP1.64□□□□□ -2.15
HMGB1P17-201ENST00000403495 TIMM22Q9Y584 194 aa1.64□□□□□ -2.15
HMGB1P17-201ENST00000403495 FAM215AQ9Y5M1 114 aa1.64□□□□□ -2.15
HMGB1P17-201ENST00000403495 ADGRB3O60242 1522 aa1.64□□□□□ -2.15
HMGB1P17-201ENST00000403495 HECW1Q76N89 1606 aa1.63□□□□□ -2.15
HMGB1P17-201ENST00000403495 DSCAMO60469 2012 aa1.63□□□□□ -2.15
HMGB1P17-201ENST00000403495 TRGV5A0A0B4J1U4 118 aa1.63□□□□□ -2.15
HMGB1P17-201ENST00000403495 A0A1B0GV72 72 aa1.63□□□□□ -2.15
HMGB1P17-201ENST00000403495 IRGMA1A4Y4 181 aa1.63□□□□□ -2.15
HMGB1P17-201ENST00000403495 FABP5P3A8MUU1 101 aa1.63□□□□□ -2.15
HMGB1P17-201ENST00000403495 CLDN25C9JDP6 229 aa1.63□□□□□ -2.15
HMGB1P17-201ENST00000403495 G3V2T6 193 aa1.63□□□□□ -2.15
HMGB1P17-201ENST00000403495 H3BT86 120 aa1.63□□□□□ -2.15
HMGB1P17-201ENST00000403495 CIAO1O76071 339 aa1.63□□□□□ -2.15
HMGB1P17-201ENST00000403495 IGHV3-7P01780 117 aa1.63□□□□□ -2.15
HMGB1P17-201ENST00000403495 CCL5P13501 91 aa1.63□□□□□ -2.15
HMGB1P17-201ENST00000403495 PSMB8P28062 276 aa1.63□□□□□ -2.15
HMGB1P17-201ENST00000403495 ALDH3A1P30838 453 aa1.63□□□□□ -2.15
HMGB1P17-201ENST00000403495 CCR2P41597 374 aa1.63□□□□□ -2.15
HMGB1P17-201ENST00000403495 RPL28P46779 137 aaKnown RBP1.63□□□□□ -2.15
HMGB1P17-201ENST00000403495 TCTAP57738 103 aa1.63□□□□□ -2.15
HMGB1P17-201ENST00000403495 RHOBP62745 196 aa1.63□□□□□ -2.15
HMGB1P17-201ENST00000403495 Q6Q795 121 aa1.63□□□□□ -2.15
HMGB1P17-201ENST00000403495 TCF24Q7RTU0 167 aa1.63□□□□□ -2.15
HMGB1P17-201ENST00000403495 SLC35E3Q7Z769 313 aa1.63□□□□□ -2.15
HMGB1P17-201ENST00000403495 C12orf45Q8N5I9 185 aaPredicted RBP1.63□□□□□ -2.15
HMGB1P17-201ENST00000403495 ZHX1-C8orf76Q96EF9 292 aa1.63□□□□□ -2.15
HMGB1P17-201ENST00000403495 IMMP2LQ96T52 175 aa1.63□□□□□ -2.15
HMGB1P17-201ENST00000403495 GINS3Q9BRX5 216 aa1.63□□□□□ -2.15
HMGB1P17-201ENST00000403495 BIN3Q9NQY0 253 aa1.63□□□□□ -2.15
HMGB1P17-201ENST00000403495 TVP23BQ9NYZ1 205 aa1.63□□□□□ -2.15
HMGB1P17-201ENST00000403495 NAT8Q9UHE5 227 aa1.63□□□□□ -2.15
HMGB1P17-201ENST00000403495 TIMM9Q9Y5J7 89 aa1.63□□□□□ -2.15
HMGB1P17-201ENST00000403495 MIA2Q96PC5 1412 aa1.63□□□□□ -2.15
HMGB1P17-201ENST00000403495 NEO1Q92859 1461 aa1.63□□□□□ -2.15
HMGB1P17-201ENST00000403495 OTOFQ9HC10 1997 aa1.62□□□□□ -2.15
HMGB1P17-201ENST00000403495 A0A0G2JQZ4 141 aa1.62□□□□□ -2.15
HMGB1P17-201ENST00000403495 C1QBP02746 253 aa1.62□□□□□ -2.15
HMGB1P17-201ENST00000403495 MSMBP08118 114 aa1.62□□□□□ -2.15
HMGB1P17-201ENST00000403495 LGALS1P09382 135 aaKnown RBP1.62□□□□□ -2.15
HMGB1P17-201ENST00000403495 SERPINB1P30740 379 aa1.62□□□□□ -2.15
HMGB1P17-201ENST00000403495 TPI1P60174 286 aa1.62□□□□□ -2.15
HMGB1P17-201ENST00000403495 NCALDP61601 193 aa1.62□□□□□ -2.15
HMGB1P17-201ENST00000403495 RHEBQ15382 184 aa1.62□□□□□ -2.15
HMGB1P17-201ENST00000403495 TSNQ15631 228 aaKnown RBP1.62□□□□□ -2.15
HMGB1P17-201ENST00000403495 SPANXN3Q5MJ09 141 aa1.62□□□□□ -2.15
HMGB1P17-201ENST00000403495 AKR1C8PQ5T2L2 129 aa1.62□□□□□ -2.15
HMGB1P17-201ENST00000403495 AKAP14Q86UN6 197 aa1.62□□□□□ -2.15
HMGB1P17-201ENST00000403495 SREK1IP1Q8N9Q2 155 aaPredicted RBP1.62□□□□□ -2.15
HMGB1P17-201ENST00000403495 OR51T1Q8NGJ9 327 aa1.62□□□□□ -2.15
HMGB1P17-201ENST00000403495 OR5J2Q8NH18 312 aa1.62□□□□□ -2.15
HMGB1P17-201ENST00000403495 ZNF471Q9BX82 626 aaPredicted RBP1.62□□□□□ -2.15
HMGB1P17-201ENST00000403495 TTTY12Q9BZ98 90 aa1.62□□□□□ -2.15
HMGB1P17-201ENST00000403495 BOLA2Q9H3K6 86 aa1.62□□□□□ -2.15
HMGB1P17-201ENST00000403495 LYRM2Q9NU23 88 aaPredicted RBP1.62□□□□□ -2.15
HMGB1P17-201ENST00000403495 MED29Q9NX70 200 aa1.62□□□□□ -2.15
HMGB1P17-201ENST00000403495 SS18L2Q9UHA2 77 aa1.62□□□□□ -2.15
HMGB1P17-201ENST00000403495 PRNDQ9UKY0 176 aa1.62□□□□□ -2.15
HMGB1P17-201ENST00000403495 DENND4BO75064 1496 aaPredicted RBP1.62□□□□□ -2.15
HMGB1P17-201ENST00000403495 CHD5Q8TDI0 1954 aa1.61□□□□□ -2.15
HMGB1P17-201ENST00000403495 TRAV38-1A0A0B4J264 116 aa1.61□□□□□ -2.15
Retrieved 100 of 20,778 RNA–protein pairs in 85.1 ms