RNA–Protein interactions for RNA: ENST00000402326.1

CBX3P9-201, Transcript of chromobox 3 pseudogene 9, humanhuman

BASIC

Gene CBX3P9, Length 552 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3P9-201ENST00000402326 GREB1Q4ZG55 1949 aa0.97□□□□□ -2.25
CBX3P9-201ENST00000402326 KIF24Q5T7B8 1368 aa0.97□□□□□ -2.25
CBX3P9-201ENST00000402326 ROBO3Q96MS0 1386 aa0.97□□□□□ -2.25
CBX3P9-201ENST00000402326 DOCK5Q9H7D0 1870 aa0.97□□□□□ -2.25
CBX3P9-201ENST00000402326 EXOC1LA0A1B0GW35 172 aa0.97□□□□□ -2.25
CBX3P9-201ENST00000402326 DPRXA6NFQ7 191 aa0.97□□□□□ -2.25
CBX3P9-201ENST00000402326 ZNF860A6NHJ4 632 aa0.97□□□□□ -2.25
CBX3P9-201ENST00000402326 FABP5P3A8MUU1 101 aa0.97□□□□□ -2.25
CBX3P9-201ENST00000402326 SLC22A1O15245 554 aa0.97□□□□□ -2.25
CBX3P9-201ENST00000402326 TRGC1P0CF51 173 aa0.97□□□□□ -2.25
CBX3P9-201ENST00000402326 RPS4Y1P22090 263 aaKnown RBP0.97□□□□□ -2.25
CBX3P9-201ENST00000402326 EMP1P54849 157 aa0.97□□□□□ -2.25
CBX3P9-201ENST00000402326 DEFA3P59666 94 aa0.97□□□□□ -2.25
CBX3P9-201ENST00000402326 HIST1H4AP62805 103 aaKnown RBP0.97□□□□□ -2.25
CBX3P9-201ENST00000402326 RELAQ04206 551 aa0.97□□□□□ -2.25
CBX3P9-201ENST00000402326 EDDM3AQ14507 147 aa0.97□□□□□ -2.25
CBX3P9-201ENST00000402326 Q6ZRN7 208 aaPredicted RBP0.97□□□□□ -2.25
CBX3P9-201ENST00000402326 SLC36A1Q7Z2H8 476 aa0.97□□□□□ -2.25
CBX3P9-201ENST00000402326 BPIFA4PQ86YQ2 179 aa0.97□□□□□ -2.25
CBX3P9-201ENST00000402326 OR6V1Q8N148 313 aa0.97□□□□□ -2.25
CBX3P9-201ENST00000402326 DYNAPQ8N1N2 210 aa0.97□□□□□ -2.25
CBX3P9-201ENST00000402326 SLC7A6Q92536 515 aa0.97□□□□□ -2.25
CBX3P9-201ENST00000402326 NIPSNAP1Q9BPW8 284 aa0.97□□□□□ -2.25
CBX3P9-201ENST00000402326 HSPB9Q9BQS6 159 aa0.97□□□□□ -2.25
CBX3P9-201ENST00000402326 DOHHQ9BU89 302 aa0.97□□□□□ -2.25
CBX3P9-201ENST00000402326 COMMD5Q9GZQ3 224 aa0.97□□□□□ -2.25
CBX3P9-201ENST00000402326 CHST6Q9GZX3 395 aa0.97□□□□□ -2.25
CBX3P9-201ENST00000402326 RNASE7Q9H1E1 156 aaKnown RBP0.97□□□□□ -2.25
CBX3P9-201ENST00000402326 TLNRD1Q9H1K6 362 aa0.97□□□□□ -2.25
CBX3P9-201ENST00000402326 IDI2-AS1Q9NZ38 188 aa0.97□□□□□ -2.25
CBX3P9-201ENST00000402326 TMEM56-RWDD3S4R434 201 aa0.97□□□□□ -2.25
CBX3P9-201ENST00000402326 COL5A3P25940 1745 aaPredicted RBP0.97□□□□□ -2.25
CBX3P9-201ENST00000402326 SCAF11Q99590 1463 aaKnown RBP0.97□□□□□ -2.25
CBX3P9-201ENST00000402326 PIK3C2GO75747 1445 aa0.97□□□□□ -2.25
CBX3P9-201ENST00000402326 CCDC88AQ3V6T2 1871 aa0.97□□□□□ -2.25
CBX3P9-201ENST00000402326 NUP155O75694 1391 aa0.96□□□□□ -2.26
CBX3P9-201ENST00000402326 MALRD1Q5VYJ5 2156 aa0.96□□□□□ -2.26
CBX3P9-201ENST00000402326 hADV38S2A0JD32 116 aa0.96□□□□□ -2.26
CBX3P9-201ENST00000402326 MEIS3P1A6NDR6 274 aa0.96□□□□□ -2.26
CBX3P9-201ENST00000402326 OR51F1A6NGY5 319 aa0.96□□□□□ -2.26
CBX3P9-201ENST00000402326 ORC5O43913 435 aa0.96□□□□□ -2.26
CBX3P9-201ENST00000402326 ZNF737O75373 536 aa0.96□□□□□ -2.26
CBX3P9-201ENST00000402326 HAND1O96004 215 aa0.96□□□□□ -2.26
CBX3P9-201ENST00000402326 NAPSAO96009 420 aa0.96□□□□□ -2.26
CBX3P9-201ENST00000402326 C1QAP02745 245 aa0.96□□□□□ -2.26
CBX3P9-201ENST00000402326 C1QCP02747 245 aa0.96□□□□□ -2.26
CBX3P9-201ENST00000402326 HSD11B1P28845 292 aa0.96□□□□□ -2.26
CBX3P9-201ENST00000402326 HOXA6P31267 233 aa0.96□□□□□ -2.26
CBX3P9-201ENST00000402326 CTAG1AP78358 180 aa0.96□□□□□ -2.26
CBX3P9-201ENST00000402326 SPA17Q15506 151 aa0.96□□□□□ -2.26
CBX3P9-201ENST00000402326 TMEM97Q5BJF2 176 aa0.96□□□□□ -2.26
CBX3P9-201ENST00000402326 RPL22L1Q6P5R6 122 aaKnown RBP0.96□□□□□ -2.26
CBX3P9-201ENST00000402326 CLVS1Q8IUQ0 354 aaPredicted RBP0.96□□□□□ -2.26
CBX3P9-201ENST00000402326 DNAJC9Q8WXX5 260 aa0.96□□□□□ -2.26
CBX3P9-201ENST00000402326 H1FXQ92522 213 aaKnown RBP0.96□□□□□ -2.26
CBX3P9-201ENST00000402326 TOMM6Q96B49 74 aa0.96□□□□□ -2.26
CBX3P9-201ENST00000402326 SIGMAR1Q99720 223 aa0.96□□□□□ -2.26
CBX3P9-201ENST00000402326 CMSS1Q9BQ75 279 aaKnown RBP0.96□□□□□ -2.26
CBX3P9-201ENST00000402326 KRTAP4-1Q9BYQ7 146 aa0.96□□□□□ -2.26
CBX3P9-201ENST00000402326 TRIM4Q9C037 500 aa0.96□□□□□ -2.26
CBX3P9-201ENST00000402326 UQCC1Q9NVA1 299 aa0.96□□□□□ -2.26
CBX3P9-201ENST00000402326 DOK5Q9P104 306 aa0.96□□□□□ -2.26
CBX3P9-201ENST00000402326 FBXO5Q9UKT4 447 aa0.96□□□□□ -2.26
CBX3P9-201ENST00000402326 RGS12O14924 1447 aa0.96□□□□□ -2.26
CBX3P9-201ENST00000402326 SORL1Q92673 2214 aa0.96□□□□□ -2.26
CBX3P9-201ENST00000402326 PTPRBP23467 1997 aa0.96□□□□□ -2.26
CBX3P9-201ENST00000402326 PCF11O94913 1555 aaKnown RBP0.96□□□□□ -2.26
CBX3P9-201ENST00000402326 COL11A1P12107 1806 aaPredicted RBP0.95□□□□□ -2.26
CBX3P9-201ENST00000402326 TRAV9-1A0A075B6T8 112 aa0.95□□□□□ -2.26
CBX3P9-201ENST00000402326 TRBV10-2A0A0K0K1G8 114 aa0.95□□□□□ -2.26
CBX3P9-201ENST00000402326 IRGMA1A4Y4 181 aa0.95□□□□□ -2.26
CBX3P9-201ENST00000402326 SIGLEC16A6NMB1 481 aa0.95□□□□□ -2.26
CBX3P9-201ENST00000402326 BUB1B-PAK6H3BSN5 160 aa0.95□□□□□ -2.26
CBX3P9-201ENST00000402326 PIRO00625 290 aa0.95□□□□□ -2.26
CBX3P9-201ENST00000402326 PDE6DO43924 150 aa0.95□□□□□ -2.26
CBX3P9-201ENST00000402326 CIAO1O76071 339 aa0.95□□□□□ -2.26
CBX3P9-201ENST00000402326 SERPINA1P01009 418 aa0.95□□□□□ -2.26
CBX3P9-201ENST00000402326 CLPSP04118 112 aa0.95□□□□□ -2.26
CBX3P9-201ENST00000402326 CAPZBP47756 277 aa0.95□□□□□ -2.26
CBX3P9-201ENST00000402326 MOGQ16653 247 aa0.95□□□□□ -2.26
CBX3P9-201ENST00000402326 IAH1Q2TAA2 248 aaPredicted RBP0.95□□□□□ -2.26
CBX3P9-201ENST00000402326 C12orf74Q32Q52 190 aa0.95□□□□□ -2.26
CBX3P9-201ENST00000402326 IBA57Q5T440 356 aaKnown RBP0.95□□□□□ -2.26
CBX3P9-201ENST00000402326 TMEM42Q69YG0 159 aa0.95□□□□□ -2.26
CBX3P9-201ENST00000402326 FAM173BQ6P4H8 233 aa0.95□□□□□ -2.26
CBX3P9-201ENST00000402326 C7orf65Q6ZTY9 151 aa0.95□□□□□ -2.26
CBX3P9-201ENST00000402326 TMEM86AQ8N2M4 240 aa0.95□□□□□ -2.26
CBX3P9-201ENST00000402326 GDPD1Q8N9F7 314 aa0.95□□□□□ -2.26
CBX3P9-201ENST00000402326 OR52R1Q8NGF1 315 aa0.95□□□□□ -2.26
CBX3P9-201ENST00000402326 OR52L1Q8NGH7 329 aa0.95□□□□□ -2.26
CBX3P9-201ENST00000402326 OR51A2Q8NGJ7 313 aa0.95□□□□□ -2.26
CBX3P9-201ENST00000402326 OR13C4Q8NGS5 318 aa0.95□□□□□ -2.26
CBX3P9-201ENST00000402326 MCFD2Q8NI22 146 aa0.95□□□□□ -2.26
CBX3P9-201ENST00000402326 RASSF5Q8WWW0 418 aa0.95□□□□□ -2.26
CBX3P9-201ENST00000402326 BORCS7Q96B45 105 aa0.95□□□□□ -2.26
CBX3P9-201ENST00000402326 BAIAP2Q9UQB8 552 aa0.95□□□□□ -2.26
CBX3P9-201ENST00000402326 CYSLTR1Q9Y271 337 aa0.95□□□□□ -2.26
CBX3P9-201ENST00000402326 DISP1Q96F81 1524 aa0.94□□□□□ -2.26
CBX3P9-201ENST00000402326 KIF13BQ9NQT8 1826 aa0.94□□□□□ -2.26
CBX3P9-201ENST00000402326 hCG_1818297A0A087WSY0 165 aa0.94□□□□□ -2.26
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms