RNA–Protein interactions for RNA: ENST00000399804.5

SCAF4-202, Transcript of SR-related CTD associated factor 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCAF4, Length 4,127 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF4-202ENST00000399804 IGHV1-8P0DP01 117 aa11.55□□□□□ -0.56
SCAF4-202ENST00000399804 GATA2P23769 480 aaPredicted RBP11.55□□□□□ -0.56
SCAF4-202ENST00000399804 FAM209BQ5JX69 171 aa11.55□□□□□ -0.56
SCAF4-202ENST00000399804 WDR25Q64LD2 544 aaPredicted RBP11.55□□□□□ -0.56
SCAF4-202ENST00000399804 GGACTQ9BVM4 153 aa11.55□□□□□ -0.56
SCAF4-202ENST00000399804 CTDSP1Q9GZU7 261 aa11.55□□□□□ -0.56
SCAF4-202ENST00000399804 ATP5IP56385 69 aaPredicted RBP11.55□□□□□ -0.56
SCAF4-202ENST00000399804 PQLC2Q6ZP29 291 aa11.55□□□□□ -0.56
SCAF4-202ENST00000399804 OR8I2Q8N0Y5 310 aa11.55□□□□□ -0.56
SCAF4-202ENST00000399804 OR10G8Q8NGN5 311 aa11.55□□□□□ -0.56
SCAF4-202ENST00000399804 GRNP28799 593 aaKnown RBP11.54□□□□□ -0.56
SCAF4-202ENST00000399804 C10orf55Q5SWW7 151 aa11.54□□□□□ -0.56
SCAF4-202ENST00000399804 CRIP3Q6Q6R5 217 aa11.54□□□□□ -0.56
SCAF4-202ENST00000399804 STXBP6Q8NFX7 210 aa11.54□□□□□ -0.56
SCAF4-202ENST00000399804 OR2T10Q8NGZ9 312 aa11.54□□□□□ -0.56
SCAF4-202ENST00000399804 CHODLQ9H9P2 273 aa11.54□□□□□ -0.56
SCAF4-202ENST00000399804 DOPEY2Q9Y3R5 2298 aa11.54□□□□□ -0.56
SCAF4-202ENST00000399804 IGKV1-39P01597 117 aa11.54□□□□□ -0.56
SCAF4-202ENST00000399804 IGKV1D-39P04432 117 aa11.54□□□□□ -0.56
SCAF4-202ENST00000399804 ZNF506Q5JVG8 444 aa11.54□□□□□ -0.56
SCAF4-202ENST00000399804 P2RX4Q99571 388 aa11.54□□□□□ -0.56
SCAF4-202ENST00000399804 CLEC3BP05452 202 aa11.54□□□□□ -0.56
SCAF4-202ENST00000399804 Q8NA96 180 aa11.54□□□□□ -0.56
SCAF4-202ENST00000399804 OR10W1Q8NGF6 305 aa11.54□□□□□ -0.56
SCAF4-202ENST00000399804 VSIRQ9H7M9 311 aa11.54□□□□□ -0.56
SCAF4-202ENST00000399804 ZMAT5Q9UDW3 170 aaKnown RBP11.54□□□□□ -0.56
SCAF4-202ENST00000399804 ARFGEF3Q5TH69 2177 aa11.53□□□□□ -0.56
SCAF4-202ENST00000399804 LOC102723971A0A1B0GUV8 181 aa11.53□□□□□ -0.56
SCAF4-202ENST00000399804 MOSP00540 346 aa11.53□□□□□ -0.56
SCAF4-202ENST00000399804 MYOD1P15172 320 aa11.53□□□□□ -0.56
SCAF4-202ENST00000399804 RNF212Q495C1 297 aa11.53□□□□□ -0.56
SCAF4-202ENST00000399804 RBM14Q96PK6 669 aaKnown RBP11.53□□□□□ -0.56
SCAF4-202ENST00000399804 C8orf88P0DMB2 117 aa11.53□□□□□ -0.56
SCAF4-202ENST00000399804 Q8TCH9 128 aa11.53□□□□□ -0.56
SCAF4-202ENST00000399804 CARHSP1Q9Y2V2 147 aaKnown RBP11.53□□□□□ -0.56
SCAF4-202ENST00000399804 IGKV1-16P04430 117 aa11.53□□□□□ -0.56
SCAF4-202ENST00000399804 TCL1AP56279 114 aa11.53□□□□□ -0.56
SCAF4-202ENST00000399804 USF2Q15853 346 aaPredicted RBP11.53□□□□□ -0.56
SCAF4-202ENST00000399804 MSMPQ1L6U9 139 aa11.53□□□□□ -0.56
SCAF4-202ENST00000399804 UNQ5815/PRO19632Q6UWF5 114 aa11.53□□□□□ -0.56
SCAF4-202ENST00000399804 TMEM14EPQ6UXP3 125 aa11.53□□□□□ -0.56
SCAF4-202ENST00000399804 SLC25A48Q6ZT89 311 aaKnown RBP11.53□□□□□ -0.56
SCAF4-202ENST00000399804 C16orf82Q7Z2V1 217 aa11.53□□□□□ -0.56
SCAF4-202ENST00000399804 IGHV2-26A0A0B4J1V2 119 aa11.52□□□□□ -0.56
SCAF4-202ENST00000399804 ARL16Q0P5N6 197 aa11.52□□□□□ -0.56
SCAF4-202ENST00000399804 FAM168AQ92567 244 aa11.52□□□□□ -0.56
SCAF4-202ENST00000399804 HIGD1AQ9Y241 93 aa11.52□□□□□ -0.56
SCAF4-202ENST00000399804 C15orf65H3BRN8 121 aa11.52□□□□□ -0.57
SCAF4-202ENST00000399804 SRP19P09132 144 aaKnown RBP11.52□□□□□ -0.57
SCAF4-202ENST00000399804 IL15RAQ13261 267 aa11.52□□□□□ -0.57
SCAF4-202ENST00000399804 HIF1ANQ9NWT6 349 aa11.52□□□□□ -0.57
SCAF4-202ENST00000399804 MMP23AO75900 390 aa11.52□□□□□ -0.57
SCAF4-202ENST00000399804 HABP2Q14520 560 aaPredicted RBP11.52□□□□□ -0.57
SCAF4-202ENST00000399804 GCSAMLQ5JQS6 135 aa11.52□□□□□ -0.57
SCAF4-202ENST00000399804 GATAD1Q8WUU5 269 aa11.52□□□□□ -0.57
SCAF4-202ENST00000399804 FAM103A1Q9BTL3 118 aaKnown RBP11.52□□□□□ -0.57
SCAF4-202ENST00000399804 PARLQ9H300 379 aa11.52□□□□□ -0.57
SCAF4-202ENST00000399804 RNF24Q9Y225 148 aa11.52□□□□□ -0.57
SCAF4-202ENST00000399804 WDR83OSQ9Y284 106 aa11.52□□□□□ -0.57
SCAF4-202ENST00000399804 TRAPPC1Q9Y5R8 145 aa11.52□□□□□ -0.57
SCAF4-202ENST00000399804 TIMM23O14925 209 aa11.51□□□□□ -0.57
SCAF4-202ENST00000399804 MDKP21741 143 aaPredicted RBP11.51□□□□□ -0.57
SCAF4-202ENST00000399804 COMPP49747 757 aaPredicted RBP11.51□□□□□ -0.57
SCAF4-202ENST00000399804 PRCDQ00LT1 54 aa11.51□□□□□ -0.57
SCAF4-202ENST00000399804 RELBQ01201 579 aa11.51□□□□□ -0.57
SCAF4-202ENST00000399804 PAX5Q02548 391 aa11.51□□□□□ -0.57
SCAF4-202ENST00000399804 GUSBP1Q15486 140 aa11.51□□□□□ -0.57
SCAF4-202ENST00000399804 PPP1R27Q86WC6 154 aa11.51□□□□□ -0.57
SCAF4-202ENST00000399804 OR52E5Q8NH55 327 aa11.51□□□□□ -0.57
SCAF4-202ENST00000399804 CLDND2Q8NHS1 167 aa11.51□□□□□ -0.57
SCAF4-202ENST00000399804 NDFIP1Q9BT67 221 aa11.51□□□□□ -0.57
SCAF4-202ENST00000399804 CHRDL1Q9BU40 450 aa11.51□□□□□ -0.57
SCAF4-202ENST00000399804 IGHV3-35A0A0C4DH35 117 aa11.51□□□□□ -0.57
SCAF4-202ENST00000399804 TEX50A0A1B0GTY4 177 aa11.51□□□□□ -0.57
SCAF4-202ENST00000399804 FAM90A9PA6NNJ1 464 aa11.51□□□□□ -0.57
SCAF4-202ENST00000399804 GATCO43716 136 aaKnown RBP11.51□□□□□ -0.57
SCAF4-202ENST00000399804 TDGF1P3P51864 188 aa11.51□□□□□ -0.57
SCAF4-202ENST00000399804 ZNF134P52741 427 aa11.51□□□□□ -0.57
SCAF4-202ENST00000399804 GAMTQ14353 236 aa11.51□□□□□ -0.57
SCAF4-202ENST00000399804 OR1L6Q8NGR2 347 aa11.51□□□□□ -0.57
SCAF4-202ENST00000399804 ANAPC16Q96DE5 110 aa11.51□□□□□ -0.57
SCAF4-202ENST00000399804 S4R3C0 116 aa11.51□□□□□ -0.57
SCAF4-202ENST00000399804 GCHFRP30047 84 aa11.51□□□□□ -0.57
SCAF4-202ENST00000399804 CCKARP32238 428 aa11.51□□□□□ -0.57
SCAF4-202ENST00000399804 C17orf58Q2M2W7 97 aa11.51□□□□□ -0.57
SCAF4-202ENST00000399804 TMEM144Q7Z5S9 345 aa11.51□□□□□ -0.57
SCAF4-202ENST00000399804 TXNDC17Q9BRA2 123 aa11.5□□□□□ -0.57
SCAF4-202ENST00000399804 H3BTX0 84 aa11.5□□□□□ -0.57
SCAF4-202ENST00000399804 SCGB1D1O95968 90 aa11.5□□□□□ -0.57
SCAF4-202ENST00000399804 DLX1P56177 255 aa11.5□□□□□ -0.57
SCAF4-202ENST00000399804 LY6EQ16553 131 aa11.5□□□□□ -0.57
SCAF4-202ENST00000399804 BET1LQ9NYM9 111 aa11.5□□□□□ -0.57
SCAF4-202ENST00000399804 WNT2P09544 360 aa11.5□□□□□ -0.57
SCAF4-202ENST00000399804 CYP2G1PQ6ZSU1 146 aa11.5□□□□□ -0.57
SCAF4-202ENST00000399804 OR51G1Q8NGK1 321 aa11.5□□□□□ -0.57
SCAF4-202ENST00000399804 OR4A5Q8NH83 315 aa11.5□□□□□ -0.57
SCAF4-202ENST00000399804 CACNG8Q8WXS5 425 aa11.5□□□□□ -0.57
SCAF4-202ENST00000399804 NAT8BQ9UHF3 227 aa11.5□□□□□ -0.57
SCAF4-202ENST00000399804 C9JQL5 133 aa11.5□□□□□ -0.57
SCAF4-202ENST00000399804 CRYBB3P26998 211 aa11.5□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms