RNA–Protein interactions for RNA: ENST00000399638.5

CACNA1C-216, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA1C, Length 6,595 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-216ENST00000399638 GGCTO75223 188 aaKnown RBP9.3□□□□□ -0.92
CACNA1C-216ENST00000399638 VENTXO95231 258 aa9.3□□□□□ -0.92
CACNA1C-216ENST00000399638 CARHSP1Q9Y2V2 147 aaKnown RBP9.3□□□□□ -0.92
CACNA1C-216ENST00000399638 STRCP1A6NGW2 1772 aa9.3□□□□□ -0.92
CACNA1C-216ENST00000399638 CD7P09564 240 aa9.3□□□□□ -0.92
CACNA1C-216ENST00000399638 TMEM50BP56557 158 aa9.3□□□□□ -0.92
CACNA1C-216ENST00000399638 RNF166Q96A37 237 aaPredicted RBP9.3□□□□□ -0.92
CACNA1C-216ENST00000399638 CREBBPQ92793 2442 aa9.3□□□□□ -0.92
CACNA1C-216ENST00000399638 H3BRM9 83 aa9.29□□□□□ -0.92
CACNA1C-216ENST00000399638 GLIPR1P48060 266 aa9.29□□□□□ -0.92
CACNA1C-216ENST00000399638 RPS20P60866 119 aaKnown RBP9.29□□□□□ -0.92
CACNA1C-216ENST00000399638 DLX4Q92988 240 aaPredicted RBP9.29□□□□□ -0.92
CACNA1C-216ENST00000399638 TMEM54Q969K7 222 aa9.29□□□□□ -0.92
CACNA1C-216ENST00000399638 PMCHL2Q9BQD1 86 aa9.29□□□□□ -0.92
CACNA1C-216ENST00000399638 SPTBN1Q01082 2364 aaKnown RBP9.29□□□□□ -0.92
CACNA1C-216ENST00000399638 FXYD7P58549 80 aa9.29□□□□□ -0.92
CACNA1C-216ENST00000399638 DRAM1Q8N682 238 aa9.29□□□□□ -0.92
CACNA1C-216ENST00000399638 C9orf106Q8NAJ2 232 aa9.29□□□□□ -0.92
CACNA1C-216ENST00000399638 PILRAQ9UKJ1 303 aa9.29□□□□□ -0.92
CACNA1C-216ENST00000399638 ZNF600Q6ZNG1 722 aa9.29□□□□□ -0.92
CACNA1C-216ENST00000399638 FNDC4Q9H6D8 234 aaPredicted RBP9.29□□□□□ -0.92
CACNA1C-216ENST00000399638 TRPM6Q9BX84 2022 aa9.29□□□□□ -0.92
CACNA1C-216ENST00000399638 TOMM40O96008 361 aa9.29□□□□□ -0.92
CACNA1C-216ENST00000399638 CECR9P0C854 216 aa9.29□□□□□ -0.92
CACNA1C-216ENST00000399638 PKIAP61925 76 aa9.29□□□□□ -0.92
CACNA1C-216ENST00000399638 RIPPLY2Q5TAB7 128 aa9.29□□□□□ -0.92
CACNA1C-216ENST00000399638 FAM27BQ5VT28 67 aa9.29□□□□□ -0.92
CACNA1C-216ENST00000399638 POC1AQ8NBT0 407 aa9.29□□□□□ -0.92
CACNA1C-216ENST00000399638 DMRT1Q9Y5R6 373 aa9.29□□□□□ -0.92
CACNA1C-216ENST00000399638 SBF2Q86WG5 1849 aa9.29□□□□□ -0.92
CACNA1C-216ENST00000399638 NCOR1O75376 2440 aa9.29□□□□□ -0.92
CACNA1C-216ENST00000399638 BRD3OSQ6XYD6 125 aa9.29□□□□□ -0.92
CACNA1C-216ENST00000399638 TMEM52Q8NDY8 209 aa9.29□□□□□ -0.92
CACNA1C-216ENST00000399638 OR11H4Q8NGC9 324 aa9.29□□□□□ -0.92
CACNA1C-216ENST00000399638 MEGF9Q9H1U4 602 aa9.29□□□□□ -0.92
CACNA1C-216ENST00000399638 LSM4Q9Y4Z0 139 aaKnown RBP9.29□□□□□ -0.92
CACNA1C-216ENST00000399638 IGHV3-53P01767 116 aa9.28□□□□□ -0.92
CACNA1C-216ENST00000399638 TPTE2P1Q5T6R2 138 aa9.28□□□□□ -0.92
CACNA1C-216ENST00000399638 CHST5Q9GZS9 411 aa9.28□□□□□ -0.92
CACNA1C-216ENST00000399638 RCC2Q9P258 522 aaKnown RBP9.28□□□□□ -0.92
CACNA1C-216ENST00000399638 SCN9AQ15858 1988 aa9.28□□□□□ -0.92
CACNA1C-216ENST00000399638 H3BMM0 161 aa9.28□□□□□ -0.92
CACNA1C-216ENST00000399638 GCM2O75603 506 aaPredicted RBP9.28□□□□□ -0.92
CACNA1C-216ENST00000399638 TMEM252Q8N6L7 170 aa9.28□□□□□ -0.92
CACNA1C-216ENST00000399638 UBE2WQ96B02 151 aa9.28□□□□□ -0.92
CACNA1C-216ENST00000399638 NINQ8N4C6 2090 aa9.28□□□□□ -0.92
CACNA1C-216ENST00000399638 ADARB2-AS1A8MUL3 147 aa9.28□□□□□ -0.92
CACNA1C-216ENST00000399638 CHKB-CPT1BH3BT56 60 aa9.28□□□□□ -0.92
CACNA1C-216ENST00000399638 GOLT1AQ6ZVE7 132 aa9.28□□□□□ -0.92
CACNA1C-216ENST00000399638 IL17RELQ6ZVW7 336 aa9.28□□□□□ -0.92
CACNA1C-216ENST00000399638 RGPD3A6NKT7 1758 aaPredicted RBP9.28□□□□□ -0.92
CACNA1C-216ENST00000399638 PSPNO60542 156 aa9.28□□□□□ -0.92
CACNA1C-216ENST00000399638 EFNA4P52798 201 aa9.28□□□□□ -0.92
CACNA1C-216ENST00000399638 ZNF114Q8NC26 417 aa9.28□□□□□ -0.92
CACNA1C-216ENST00000399638 GTF3AQ92664 365 aaKnown RBP9.28□□□□□ -0.92
CACNA1C-216ENST00000399638 ANAPC10Q9UM13 185 aa9.28□□□□□ -0.92
CACNA1C-216ENST00000399638 NUP214P35658 2090 aaPredicted RBP9.28□□□□□ -0.92
CACNA1C-216ENST00000399638 SLC25A16P16260 332 aa9.28□□□□□ -0.92
CACNA1C-216ENST00000399638 PAPPA-AS1Q5QFB9 102 aa9.28□□□□□ -0.92
CACNA1C-216ENST00000399638 ZAR1Q86SH2 424 aa9.28□□□□□ -0.92
CACNA1C-216ENST00000399638 G6PC2Q9NQR9 355 aa9.28□□□□□ -0.92
CACNA1C-216ENST00000399638 NEUROG3Q9Y4Z2 214 aa9.28□□□□□ -0.92
CACNA1C-216ENST00000399638 TRIP12Q14669 1992 aaPredicted RBP9.28□□□□□ -0.92
CACNA1C-216ENST00000399638 PLXNB2O15031 1838 aa9.28□□□□□ -0.92
CACNA1C-216ENST00000399638 DUSP14O95147 198 aaKnown RBP9.28□□□□□ -0.92
CACNA1C-216ENST00000399638 LHX2P50458 406 aa9.28□□□□□ -0.92
CACNA1C-216ENST00000399638 CLDND2Q8NHS1 167 aa9.28□□□□□ -0.92
CACNA1C-216ENST00000399638 MSRB2Q9Y3D2 182 aa9.28□□□□□ -0.92
CACNA1C-216ENST00000399638 HOXA5P20719 270 aa9.27□□□□□ -0.92
CACNA1C-216ENST00000399638 PQLC2Q6ZP29 291 aa9.27□□□□□ -0.92
CACNA1C-216ENST00000399638 HAPLN4Q86UW8 402 aa9.27□□□□□ -0.92
CACNA1C-216ENST00000399638 GRIFINA4D1Z8 144 aa9.27□□□□□ -0.93
CACNA1C-216ENST00000399638 RBMY1FQ15415 496 aaKnown RBP9.27□□□□□ -0.93
CACNA1C-216ENST00000399638 PRR31Q5SQ13 230 aa9.27□□□□□ -0.93
CACNA1C-216ENST00000399638 FAM216BQ8N7L0 139 aa9.27□□□□□ -0.93
CACNA1C-216ENST00000399638 OR51G1Q8NGK1 321 aa9.27□□□□□ -0.93
CACNA1C-216ENST00000399638 C17orf100A8MU93 164 aa9.27□□□□□ -0.93
CACNA1C-216ENST00000399638 GLRX5Q86SX6 157 aa9.27□□□□□ -0.93
CACNA1C-216ENST00000399638 RAB24Q969Q5 203 aa9.27□□□□□ -0.93
CACNA1C-216ENST00000399638 TDRD6O60522 2096 aaKnown RBP9.27□□□□□ -0.93
CACNA1C-216ENST00000399638 LEPROTL1O95214 131 aa9.27□□□□□ -0.93
CACNA1C-216ENST00000399638 ZCCHC24Q8N2G6 241 aaKnown RBP9.27□□□□□ -0.93
CACNA1C-216ENST00000399638 C14orf144Q96I85 54 aa9.27□□□□□ -0.93
CACNA1C-216ENST00000399638 JPT2Q9H910 190 aa9.27□□□□□ -0.93
CACNA1C-216ENST00000399638 C21orf62Q9NYP8 219 aa9.27□□□□□ -0.93
CACNA1C-216ENST00000399638 INTS1Q8N201 2190 aaKnown RBP9.27□□□□□ -0.93
CACNA1C-216ENST00000399638 ARID2Q68CP9 1835 aa9.27□□□□□ -0.93
CACNA1C-216ENST00000399638 VMO1Q7Z5L0 202 aa9.27□□□□□ -0.93
CACNA1C-216ENST00000399638 NRIP2Q9BQI9 281 aa9.27□□□□□ -0.93
CACNA1C-216ENST00000399638 JPT1Q9UK76 154 aa9.27□□□□□ -0.93
CACNA1C-216ENST00000399638 OCIAD2Q56VL3 154 aa9.26□□□□□ -0.93
CACNA1C-216ENST00000399638 UBE2E2Q96LR5 201 aa9.26□□□□□ -0.93
CACNA1C-216ENST00000399638 TRAV14DV4A0A0A6YYC5 116 aa9.26□□□□□ -0.93
CACNA1C-216ENST00000399638 IGHV2OR16-5A0A0B4J2B6 119 aa9.26□□□□□ -0.93
CACNA1C-216ENST00000399638 RFPL3SP0C7P2 107 aa9.26□□□□□ -0.93
CACNA1C-216ENST00000399638 IBA57Q5T440 356 aaKnown RBP9.26□□□□□ -0.93
CACNA1C-216ENST00000399638 SCGB3A1Q96QR1 104 aa9.26□□□□□ -0.93
CACNA1C-216ENST00000399638 PSMG4Q5JS54 123 aa9.26□□□□□ -0.93
CACNA1C-216ENST00000399638 PUSL1Q8N0Z8 303 aaKnown RBP9.26□□□□□ -0.93
CACNA1C-216ENST00000399638 PTPRFP10586 1907 aa9.26□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms