RNA–Protein interactions for RNA: ENST00000399299.5

SMIM11A-203, Transcript of small integral membrane protein 11A, humanhuman

TSL 1 (best) BASIC

Gene SMIM11A, Length 1,033 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM11A-203ENST00000399299 ZNF785A8K8V0 405 aa11.22□□□□□ -0.61
SMIM11A-203ENST00000399299 B3GALNT1O75752 331 aa11.22□□□□□ -0.61
SMIM11A-203ENST00000399299 PI3P19957 117 aa11.22□□□□□ -0.61
SMIM11A-203ENST00000399299 EDN2P20800 178 aa11.22□□□□□ -0.61
SMIM11A-203ENST00000399299 PPP5CP53041 499 aa11.22□□□□□ -0.61
SMIM11A-203ENST00000399299 PRCDQ00LT1 54 aa11.22□□□□□ -0.61
SMIM11A-203ENST00000399299 SPSB3Q6PJ21 355 aa11.22□□□□□ -0.61
SMIM11A-203ENST00000399299 CCDC71LQ8N9Z2 235 aa11.22□□□□□ -0.61
SMIM11A-203ENST00000399299 ZNF114Q8NC26 417 aa11.22□□□□□ -0.61
SMIM11A-203ENST00000399299 CACNG8Q8WXS5 425 aa11.22□□□□□ -0.61
SMIM11A-203ENST00000399299 DIRAS2Q96HU8 199 aa11.22□□□□□ -0.61
SMIM11A-203ENST00000399299 TP53RKQ96S44 253 aa11.22□□□□□ -0.61
SMIM11A-203ENST00000399299 ZNF436Q9C0F3 470 aaPredicted RBP11.22□□□□□ -0.61
SMIM11A-203ENST00000399299 SLC2A8Q9NY64 477 aa11.22□□□□□ -0.61
SMIM11A-203ENST00000399299 C21orf62Q9NYP8 219 aa11.22□□□□□ -0.61
SMIM11A-203ENST00000399299 C3orf85A0A1B0GTC6 90 aa11.21□□□□□ -0.61
SMIM11A-203ENST00000399299 H3BMQ9 156 aa11.21□□□□□ -0.61
SMIM11A-203ENST00000399299 K7EIM0 57 aa11.21□□□□□ -0.61
SMIM11A-203ENST00000399299 NOL3O60936 208 aaKnown RBP11.21□□□□□ -0.61
SMIM11A-203ENST00000399299 ATG12O94817 140 aa11.21□□□□□ -0.61
SMIM11A-203ENST00000399299 CTSDP07339 412 aaPredicted RBP11.21□□□□□ -0.61
SMIM11A-203ENST00000399299 P0C879 139 aa11.21□□□□□ -0.61
SMIM11A-203ENST00000399299 C8orf88P0DMB2 117 aa11.21□□□□□ -0.61
SMIM11A-203ENST00000399299 CD81P60033 236 aa11.21□□□□□ -0.61
SMIM11A-203ENST00000399299 HSPE1P61604 102 aaKnown RBP11.21□□□□□ -0.61
SMIM11A-203ENST00000399299 IL18Q14116 193 aa11.21□□□□□ -0.61
SMIM11A-203ENST00000399299 SCGB2B2Q4G0G5 96 aa11.21□□□□□ -0.61
SMIM11A-203ENST00000399299 UNQ9165/PRO28630Q6UXU0 137 aa11.21□□□□□ -0.61
SMIM11A-203ENST00000399299 OR2C3Q8N628 320 aa11.21□□□□□ -0.61
SMIM11A-203ENST00000399299 OR13C8Q8NGS7 320 aa11.21□□□□□ -0.61
SMIM11A-203ENST00000399299 SCARB1Q8WTV0 552 aa11.21□□□□□ -0.61
SMIM11A-203ENST00000399299 TMEM190Q8WZ59 177 aa11.21□□□□□ -0.61
SMIM11A-203ENST00000399299 NEURL2Q9BR09 285 aa11.21□□□□□ -0.61
SMIM11A-203ENST00000399299 TUBA4BQ9H853 241 aa11.21□□□□□ -0.61
SMIM11A-203ENST00000399299 COPZ2Q9P299 210 aa11.21□□□□□ -0.61
SMIM11A-203ENST00000399299 UFC1Q9Y3C8 167 aa11.21□□□□□ -0.61
SMIM11A-203ENST00000399299 OR2T8A6NH00 312 aa11.2□□□□□ -0.62
SMIM11A-203ENST00000399299 F8W735 103 aaPredicted RBP11.2□□□□□ -0.62
SMIM11A-203ENST00000399299 IGKV1-5P01602 117 aa11.2□□□□□ -0.62
SMIM11A-203ENST00000399299 UCP1P25874 307 aa11.2□□□□□ -0.62
SMIM11A-203ENST00000399299 AKR1C2P52895 323 aa11.2□□□□□ -0.62
SMIM11A-203ENST00000399299 SURF2Q15527 256 aaPredicted RBP11.2□□□□□ -0.62
SMIM11A-203ENST00000399299 TM4SF20Q53R12 229 aa11.2□□□□□ -0.62
SMIM11A-203ENST00000399299 ZNF57Q68EA5 555 aaPredicted RBP11.2□□□□□ -0.62
SMIM11A-203ENST00000399299 UXS1Q8NBZ7 420 aa11.2□□□□□ -0.62
SMIM11A-203ENST00000399299 MARCH1Q8TCQ1 289 aa11.2□□□□□ -0.62
SMIM11A-203ENST00000399299 ISOC1Q96CN7 298 aa11.2□□□□□ -0.62
SMIM11A-203ENST00000399299 SLIRPQ9GZT3 109 aaKnown RBP11.2□□□□□ -0.62
SMIM11A-203ENST00000399299 GAR1Q9NY12 217 aaKnown RBP11.2□□□□□ -0.62
SMIM11A-203ENST00000399299 MRPL27Q9P0M9 148 aaKnown RBP11.2□□□□□ -0.62
SMIM11A-203ENST00000399299 MLXQ9UH92 298 aa11.2□□□□□ -0.62
SMIM11A-203ENST00000399299 TRAV25A0A0B4J276 109 aa11.19□□□□□ -0.62
SMIM11A-203ENST00000399299 DISC1C4P0D8 188 aa11.19□□□□□ -0.62
SMIM11A-203ENST00000399299 INS-IGF2F8WCM5 200 aa11.19□□□□□ -0.62
SMIM11A-203ENST00000399299 C3orf84H3BNL1 204 aa11.19□□□□□ -0.62
SMIM11A-203ENST00000399299 NDUFA4O00483 81 aa11.19□□□□□ -0.62
SMIM11A-203ENST00000399299 GSTZ1O43708 216 aaPredicted RBP11.19□□□□□ -0.62
SMIM11A-203ENST00000399299 CD7P09564 240 aa11.19□□□□□ -0.62
SMIM11A-203ENST00000399299 AKAIN1P0CW23 69 aa11.19□□□□□ -0.62
SMIM11A-203ENST00000399299 FCGR2BP31994 310 aaPredicted RBP11.19□□□□□ -0.62
SMIM11A-203ENST00000399299 GUCA2BQ16661 112 aa11.19□□□□□ -0.62
SMIM11A-203ENST00000399299 HAGHQ16775 308 aa11.19□□□□□ -0.62
SMIM11A-203ENST00000399299 TMEM61Q8N0U2 210 aa11.19□□□□□ -0.62
SMIM11A-203ENST00000399299 OR4C16Q8NGL9 310 aa11.19□□□□□ -0.62
SMIM11A-203ENST00000399299 WDR89Q96FK6 387 aaPredicted RBP11.19□□□□□ -0.62
SMIM11A-203ENST00000399299 SPATA25Q9BR10 227 aa11.19□□□□□ -0.62
SMIM11A-203ENST00000399299 C6orf62Q9GZU0 229 aaPredicted RBP11.19□□□□□ -0.62
SMIM11A-203ENST00000399299 PLEKHA3Q9HB20 300 aa11.19□□□□□ -0.62
SMIM11A-203ENST00000399299 RSL24D1Q9UHA3 163 aaKnown RBP11.19□□□□□ -0.62
SMIM11A-203ENST00000399299 IGHV3-35A0A0C4DH35 117 aa11.18□□□□□ -0.62
SMIM11A-203ENST00000399299 I3L2K1 104 aa11.18□□□□□ -0.62
SMIM11A-203ENST00000399299 ADMP35318 185 aa11.18□□□□□ -0.62
SMIM11A-203ENST00000399299 ERHP84090 104 aaKnown RBP11.18□□□□□ -0.62
SMIM11A-203ENST00000399299 TRIM16LQ309B1 348 aa11.18□□□□□ -0.62
SMIM11A-203ENST00000399299 FAAP20Q6NZ36 180 aa11.18□□□□□ -0.62
SMIM11A-203ENST00000399299 BTNL8Q6UX41 500 aa11.18□□□□□ -0.62
SMIM11A-203ENST00000399299 LINC00322Q6ZN03 302 aaPredicted RBP11.18□□□□□ -0.62
SMIM11A-203ENST00000399299 CITED4Q96RK1 184 aa11.18□□□□□ -0.62
SMIM11A-203ENST00000399299 TXN2Q99757 166 aa11.18□□□□□ -0.62
SMIM11A-203ENST00000399299 CHRDL1Q9BU40 450 aa11.18□□□□□ -0.62
SMIM11A-203ENST00000399299 NXF2Q9GZY0 626 aaKnown RBP11.18□□□□□ -0.62
SMIM11A-203ENST00000399299 TMEM222Q9H0R3 208 aa11.18□□□□□ -0.62
SMIM11A-203ENST00000399299 DAZ1Q9NQZ3 744 aaKnown RBP11.18□□□□□ -0.62
SMIM11A-203ENST00000399299 C14orf166Q9Y224 244 aaKnown RBP11.18□□□□□ -0.62
SMIM11A-203ENST00000399299 KMT2CQ8NEZ4 4911 aaKnown RBP11.17□□□□□ -0.62
SMIM11A-203ENST00000399299 IGHV3-21A0A0B4J1V1 117 aa11.17□□□□□ -0.62
SMIM11A-203ENST00000399299 A0A0B4J293 547 aa11.17□□□□□ -0.62
SMIM11A-203ENST00000399299 ANKRD20A5PA0PJZ0 165 aa11.17□□□□□ -0.62
SMIM11A-203ENST00000399299 OR11H12B2RN74 326 aa11.17□□□□□ -0.62
SMIM11A-203ENST00000399299 CDS2O95674 445 aa11.17□□□□□ -0.62
SMIM11A-203ENST00000399299 IZUMO4Q1ZYL8 232 aa11.17□□□□□ -0.62
SMIM11A-203ENST00000399299 ANKRD55Q3KP44 614 aa11.17□□□□□ -0.62
SMIM11A-203ENST00000399299 SP6Q3SY56 376 aa11.17□□□□□ -0.62
SMIM11A-203ENST00000399299 Q56UQ5 140 aa11.17□□□□□ -0.62
SMIM11A-203ENST00000399299 SLC16A13Q7RTY0 426 aa11.17□□□□□ -0.62
SMIM11A-203ENST00000399299 FAM219AQ8IW50 185 aa11.17□□□□□ -0.62
SMIM11A-203ENST00000399299 UBAC2Q8NBM4 344 aa11.17□□□□□ -0.62
SMIM11A-203ENST00000399299 RRNAD1Q96FB5 475 aaKnown RBP11.17□□□□□ -0.62
SMIM11A-203ENST00000399299 PRRT1Q99946 306 aa11.17□□□□□ -0.62
SMIM11A-203ENST00000399299 SOSTQ9BQB4 213 aa11.17□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms