RNA–Protein interactions for RNA: ENST00000399264.1

CCDC144A-205, Transcript of coiled-coil domain containing 144A, humanhuman

TSL 2

Gene CCDC144A, Length 2,815 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144A-205ENST00000399264 CEACAM4O75871 244 aa11.85□□□□□ -0.51
CCDC144A-205ENST00000399264 SLC35B1P78383 322 aa11.85□□□□□ -0.51
CCDC144A-205ENST00000399264 PRB3Q04118 309 aaPredicted RBP11.85□□□□□ -0.51
CCDC144A-205ENST00000399264 SSX2Q16385 188 aa11.85□□□□□ -0.51
CCDC144A-205ENST00000399264 ACY3Q96HD9 319 aa11.85□□□□□ -0.51
CCDC144A-205ENST00000399264 TEX50A0A1B0GTY4 177 aa11.84□□□□□ -0.51
CCDC144A-205ENST00000399264 F2Z2F3 143 aa11.84□□□□□ -0.51
CCDC144A-205ENST00000399264 TSTD3H0UI37 97 aa11.84□□□□□ -0.51
CCDC144A-205ENST00000399264 CD40P25942 277 aa11.84□□□□□ -0.51
CCDC144A-205ENST00000399264 CRYBB3P26998 211 aa11.84□□□□□ -0.51
CCDC144A-205ENST00000399264 SSBP2P81877 361 aaPredicted RBP11.84□□□□□ -0.51
CCDC144A-205ENST00000399264 ZNF788Q6ZQV5 615 aa11.84□□□□□ -0.51
CCDC144A-205ENST00000399264 OR10G8Q8NGN5 311 aa11.84□□□□□ -0.51
CCDC144A-205ENST00000399264 OR5R1Q8NH85 324 aa11.84□□□□□ -0.51
CCDC144A-205ENST00000399264 OR10J1P30954 320 aa11.84□□□□□ -0.51
CCDC144A-205ENST00000399264 DLX1P56177 255 aa11.84□□□□□ -0.51
CCDC144A-205ENST00000399264 RHOBP62745 196 aa11.84□□□□□ -0.51
CCDC144A-205ENST00000399264 FOXL1Q12952 345 aa11.84□□□□□ -0.51
CCDC144A-205ENST00000399264 C10orf55Q5SWW7 151 aa11.84□□□□□ -0.51
CCDC144A-205ENST00000399264 LHFPL4Q7Z7J7 247 aa11.84□□□□□ -0.51
CCDC144A-205ENST00000399264 GBGT1Q8N5D6 347 aa11.84□□□□□ -0.51
CCDC144A-205ENST00000399264 RBMXL3Q8N7X1 1067 aaKnown RBP11.84□□□□□ -0.51
CCDC144A-205ENST00000399264 OR2T6Q8NHC8 308 aa11.84□□□□□ -0.51
CCDC144A-205ENST00000399264 NEUROG1Q92886 237 aa11.84□□□□□ -0.51
CCDC144A-205ENST00000399264 NABP2Q9BQ15 211 aa11.84□□□□□ -0.51
CCDC144A-205ENST00000399264 SLC35D1Q9NTN3 355 aa11.84□□□□□ -0.51
CCDC144A-205ENST00000399264 TP53TG3Q9ULZ0 132 aa11.84□□□□□ -0.51
CCDC144A-205ENST00000399264 TP53TG5Q9Y2B4 290 aa11.84□□□□□ -0.51
CCDC144A-205ENST00000399264 TRAV5A0A0B4J249 113 aa11.83□□□□□ -0.52
CCDC144A-205ENST00000399264 SAA1P0DJI8 122 aaPredicted RBP11.83□□□□□ -0.52
CCDC144A-205ENST00000399264 LCN2P80188 198 aa11.83□□□□□ -0.52
CCDC144A-205ENST00000399264 C1orf185Q5T7R7 199 aa11.83□□□□□ -0.52
CCDC144A-205ENST00000399264 DOLPP1Q86YN1 238 aa11.83□□□□□ -0.52
CCDC144A-205ENST00000399264 DMRTC2Q8IXT2 367 aaPredicted RBP11.83□□□□□ -0.52
CCDC144A-205ENST00000399264 MRPL20Q9BYC9 149 aaKnown RBP11.83□□□□□ -0.52
CCDC144A-205ENST00000399264 CHRNB4P30926 498 aa11.83□□□□□ -0.52
CCDC144A-205ENST00000399264 KIR2DS2P43631 304 aa11.83□□□□□ -0.52
CCDC144A-205ENST00000399264 GATA4P43694 442 aa11.83□□□□□ -0.52
CCDC144A-205ENST00000399264 RPL29P47914 159 aaKnown RBP11.83□□□□□ -0.52
CCDC144A-205ENST00000399264 ZNF90Q03938 601 aa11.83□□□□□ -0.52
CCDC144A-205ENST00000399264 FXYD3Q14802 87 aa11.83□□□□□ -0.52
CCDC144A-205ENST00000399264 KRTCAP3Q53RY4 240 aa11.83□□□□□ -0.52
CCDC144A-205ENST00000399264 PLEKHA3Q9HB20 300 aa11.83□□□□□ -0.52
CCDC144A-205ENST00000399264 RPUSD1Q9UJJ7 312 aaKnown RBP11.83□□□□□ -0.52
CCDC144A-205ENST00000399264 SLC45A2Q9UMX9 530 aa11.83□□□□□ -0.52
CCDC144A-205ENST00000399264 A8MWP6 167 aa11.82□□□□□ -0.52
CCDC144A-205ENST00000399264 A8MXE2 369 aa11.82□□□□□ -0.52
CCDC144A-205ENST00000399264 UPK2O00526 184 aa11.82□□□□□ -0.52
CCDC144A-205ENST00000399264 CD99P14209 185 aa11.82□□□□□ -0.52
CCDC144A-205ENST00000399264 REC114Q7Z4M0 266 aa11.82□□□□□ -0.52
CCDC144A-205ENST00000399264 WFDC8Q8IUA0 241 aa11.82□□□□□ -0.52
CCDC144A-205ENST00000399264 MISP3Q96FF7 219 aa11.82□□□□□ -0.52
CCDC144A-205ENST00000399264 RNASE7Q9H1E1 156 aaKnown RBP11.82□□□□□ -0.52
CCDC144A-205ENST00000399264 IL19Q9UHD0 177 aa11.82□□□□□ -0.52
CCDC144A-205ENST00000399264 LINC00310P59036 64 aa11.82□□□□□ -0.52
CCDC144A-205ENST00000399264 SLC25A48Q6ZT89 311 aaKnown RBP11.82□□□□□ -0.52
CCDC144A-205ENST00000399264 NHLRC2Q8NBF2 726 aa11.82□□□□□ -0.52
CCDC144A-205ENST00000399264 LINC00479Q96M42 142 aa11.82□□□□□ -0.52
CCDC144A-205ENST00000399264 MALRD1Q5VYJ5 2156 aa11.82□□□□□ -0.52
CCDC144A-205ENST00000399264 OR7C2O60412 319 aa11.82□□□□□ -0.52
CCDC144A-205ENST00000399264 ZNF600Q6ZNG1 722 aa11.82□□□□□ -0.52
CCDC144A-205ENST00000399264 C1orf174Q8IYL3 243 aa11.82□□□□□ -0.52
CCDC144A-205ENST00000399264 TMEM18Q96B42 140 aa11.82□□□□□ -0.52
CCDC144A-205ENST00000399264 EAF1Q96JC9 268 aaPredicted RBP11.82□□□□□ -0.52
CCDC144A-205ENST00000399264 SCGB1D1O95968 90 aa11.81□□□□□ -0.52
CCDC144A-205ENST00000399264 TCL1AP56279 114 aa11.81□□□□□ -0.52
CCDC144A-205ENST00000399264 LGALS4P56470 323 aa11.81□□□□□ -0.52
CCDC144A-205ENST00000399264 PRCDQ00LT1 54 aa11.81□□□□□ -0.52
CCDC144A-205ENST00000399264 PQLC2Q6ZP29 291 aa11.81□□□□□ -0.52
CCDC144A-205ENST00000399264 Q6ZS92 163 aa11.81□□□□□ -0.52
CCDC144A-205ENST00000399264 MED13LQ71F56 2210 aa11.81□□□□□ -0.52
CCDC144A-205ENST00000399264 ATRXP46100 2492 aa11.81□□□□□ -0.52
CCDC144A-205ENST00000399264 GGTLC3B5MD39 225 aa11.81□□□□□ -0.52
CCDC144A-205ENST00000399264 IER3P46695 156 aa11.81□□□□□ -0.52
CCDC144A-205ENST00000399264 ERVFC1-1P60608 527 aa11.81□□□□□ -0.52
CCDC144A-205ENST00000399264 TDRG1Q3Y452 100 aa11.81□□□□□ -0.52
CCDC144A-205ENST00000399264 CENPWQ5EE01 88 aa11.81□□□□□ -0.52
CCDC144A-205ENST00000399264 RUSC1-AS1Q66K80 236 aa11.81□□□□□ -0.52
CCDC144A-205ENST00000399264 LYPD2Q6UXB3 125 aa11.81□□□□□ -0.52
CCDC144A-205ENST00000399264 RITA1Q96K30 269 aa11.81□□□□□ -0.52
CCDC144A-205ENST00000399264 SUMO1P63165 101 aaKnown RBP11.8□□□□□ -0.52
CCDC144A-205ENST00000399264 RAB31Q13636 194 aa11.8□□□□□ -0.52
CCDC144A-205ENST00000399264 C19orf35Q6ZS72 473 aa11.8□□□□□ -0.52
CCDC144A-205ENST00000399264 OR8I2Q8N0Y5 310 aa11.8□□□□□ -0.52
CCDC144A-205ENST00000399264 DPRXA6NFQ7 191 aa11.8□□□□□ -0.52
CCDC144A-205ENST00000399264 ITGB1BP1O14713 200 aa11.8□□□□□ -0.52
CCDC144A-205ENST00000399264 APELAP0DMC3 54 aa11.8□□□□□ -0.52
CCDC144A-205ENST00000399264 RNASE2P10153 161 aaKnown RBP11.8□□□□□ -0.52
CCDC144A-205ENST00000399264 PAX1P15863 534 aa11.8□□□□□ -0.52
CCDC144A-205ENST00000399264 SELENOVP59797 346 aa11.8□□□□□ -0.52
CCDC144A-205ENST00000399264 KIAA1644Q3SXP7 199 aa11.8□□□□□ -0.52
CCDC144A-205ENST00000399264 PRR31Q5SQ13 230 aa11.8□□□□□ -0.52
CCDC144A-205ENST00000399264 ZNF436-AS1Q8NC38 126 aaPredicted RBP11.8□□□□□ -0.52
CCDC144A-205ENST00000399264 UHRF2Q96PU4 802 aa11.8□□□□□ -0.52
CCDC144A-205ENST00000399264 KLK10O43240 276 aa11.79□□□□□ -0.52
CCDC144A-205ENST00000399264 CA1P00915 261 aaPredicted RBP11.79□□□□□ -0.52
CCDC144A-205ENST00000399264 ST6GALNAC3Q8NDV1 305 aa11.79□□□□□ -0.52
CCDC144A-205ENST00000399264 CCL17Q92583 94 aa11.79□□□□□ -0.52
CCDC144A-205ENST00000399264 HARBI1Q96MB7 349 aa11.79□□□□□ -0.52
CCDC144A-205ENST00000399264 MRPL36Q9P0J6 103 aaKnown RBP11.79□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms