RNA–Protein interactions for RNA: ENST00000399127.5

COL25A1-202, Transcript of collagen type XXV alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL25A1, Length 2,500 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL25A1-202ENST00000399127 C1orf194Q5T5A4 169 aa9.63□□□□□ -0.87
COL25A1-202ENST00000399127 TMEM200BQ69YZ2 307 aa9.63□□□□□ -0.87
COL25A1-202ENST00000399127 C1orf87Q8N0U7 546 aa9.63□□□□□ -0.87
COL25A1-202ENST00000399127 KIR2DL5AQ8N109 375 aa9.63□□□□□ -0.87
COL25A1-202ENST00000399127 LINC00312Q9Y6C7 94 aa9.63□□□□□ -0.87
COL25A1-202ENST00000399127 MAP1LC3B2A6NCE7 125 aa9.62□□□□□ -0.87
COL25A1-202ENST00000399127 CCL25O15444 150 aa9.62□□□□□ -0.87
COL25A1-202ENST00000399127 CD3EP07766 207 aa9.62□□□□□ -0.87
COL25A1-202ENST00000399127 TFPI2P48307 235 aa9.62□□□□□ -0.87
COL25A1-202ENST00000399127 OR1L6Q8NGR2 347 aa9.62□□□□□ -0.87
COL25A1-202ENST00000399127 NPCDR1Q9BY65 106 aa9.62□□□□□ -0.87
COL25A1-202ENST00000399127 MAP1LC3BQ9GZQ8 125 aa9.62□□□□□ -0.87
COL25A1-202ENST00000399127 CTSZQ9UBR2 303 aa9.62□□□□□ -0.87
COL25A1-202ENST00000399127 CT45A6P0DMU7 189 aa9.62□□□□□ -0.87
COL25A1-202ENST00000399127 CT45A5P0DMU8 189 aa9.62□□□□□ -0.87
COL25A1-202ENST00000399127 CT45A7P0DMV0 189 aa9.62□□□□□ -0.87
COL25A1-202ENST00000399127 THBS3P49746 956 aa9.62□□□□□ -0.87
COL25A1-202ENST00000399127 IQCJQ1A5X6 159 aa9.62□□□□□ -0.87
COL25A1-202ENST00000399127 ZNF506Q5JVG8 444 aa9.62□□□□□ -0.87
COL25A1-202ENST00000399127 FFAR4Q5NUL3 377 aa9.62□□□□□ -0.87
COL25A1-202ENST00000399127 SLC25A48Q6ZT89 311 aaKnown RBP9.62□□□□□ -0.87
COL25A1-202ENST00000399127 CORO2AQ92828 525 aa9.62□□□□□ -0.87
COL25A1-202ENST00000399127 ZNF714Q96N38 554 aa9.62□□□□□ -0.87
COL25A1-202ENST00000399127 CISD1Q9NZ45 108 aaKnown RBP9.62□□□□□ -0.87
COL25A1-202ENST00000399127 TCF19Q9Y242 345 aa9.62□□□□□ -0.87
COL25A1-202ENST00000399127 H3BQ15 152 aa9.61□□□□□ -0.87
COL25A1-202ENST00000399127 TAGLN2P37802 199 aaKnown RBP9.61□□□□□ -0.87
COL25A1-202ENST00000399127 KIR2DS2P43631 304 aa9.61□□□□□ -0.87
COL25A1-202ENST00000399127 RAB11AP62491 216 aa9.61□□□□□ -0.87
COL25A1-202ENST00000399127 PRB3Q04118 309 aaPredicted RBP9.61□□□□□ -0.87
COL25A1-202ENST00000399127 ATP6V1FQ16864 119 aa9.61□□□□□ -0.87
COL25A1-202ENST00000399127 HIPK2Q9H2X6 1198 aa9.61□□□□□ -0.87
COL25A1-202ENST00000399127 LINC00574Q9H8X3 128 aa9.61□□□□□ -0.87
COL25A1-202ENST00000399127 SLC39A9Q9NUM3 307 aa9.61□□□□□ -0.87
COL25A1-202ENST00000399127 TRAV1-1A0A0B4J248 108 aa9.61□□□□□ -0.87
COL25A1-202ENST00000399127 LOC102723971A0A1B0GUV8 181 aa9.61□□□□□ -0.87
COL25A1-202ENST00000399127 NDUFB3O43676 98 aa9.61□□□□□ -0.87
COL25A1-202ENST00000399127 APOBEC3AP31941 199 aaPredicted RBP9.61□□□□□ -0.87
COL25A1-202ENST00000399127 GCSAMLQ5JQS6 135 aa9.61□□□□□ -0.87
COL25A1-202ENST00000399127 ZNF436-AS1Q8NC38 126 aaPredicted RBP9.61□□□□□ -0.87
COL25A1-202ENST00000399127 OR10G4Q8NGN3 311 aa9.61□□□□□ -0.87
COL25A1-202ENST00000399127 OR10G9Q8NGN4 311 aa9.61□□□□□ -0.87
COL25A1-202ENST00000399127 OR10G7Q8NGN6 311 aa9.61□□□□□ -0.87
COL25A1-202ENST00000399127 FAM216AQ8WUB2 273 aa9.61□□□□□ -0.87
COL25A1-202ENST00000399127 TMEM170AQ8WVE7 144 aa9.61□□□□□ -0.87
COL25A1-202ENST00000399127 MBD3L1Q8WWY6 194 aa9.61□□□□□ -0.87
COL25A1-202ENST00000399127 LHX4Q969G2 390 aa9.61□□□□□ -0.87
COL25A1-202ENST00000399127 MS4A5Q9H3V2 200 aa9.61□□□□□ -0.87
COL25A1-202ENST00000399127 IGHV1-69-2A0A0G2JMI3 117 aa9.6□□□□□ -0.87
COL25A1-202ENST00000399127 FAM90A9PA6NNJ1 464 aa9.6□□□□□ -0.87
COL25A1-202ENST00000399127 C15orf61A6NNL5 157 aa9.6□□□□□ -0.87
COL25A1-202ENST00000399127 SRRM4A7MD48 611 aaKnown RBP9.6□□□□□ -0.87
COL25A1-202ENST00000399127 HSPB1P04792 205 aaKnown RBP9.6□□□□□ -0.87
COL25A1-202ENST00000399127 BCL2P10415 239 aa9.6□□□□□ -0.87
COL25A1-202ENST00000399127 CD1BP29016 333 aa9.6□□□□□ -0.87
COL25A1-202ENST00000399127 VDAC2P45880 294 aaPredicted RBP9.6□□□□□ -0.87
COL25A1-202ENST00000399127 UQCRFS1P47985 274 aa9.6□□□□□ -0.87
COL25A1-202ENST00000399127 DLX1P56177 255 aa9.6□□□□□ -0.87
COL25A1-202ENST00000399127 GNB2P62879 340 aa9.6□□□□□ -0.87
COL25A1-202ENST00000399127 DIAPH2-AS1Q14236 149 aa9.6□□□□□ -0.87
COL25A1-202ENST00000399127 LRRC10Q5BKY1 277 aa9.6□□□□□ -0.87
COL25A1-202ENST00000399127 SSX8Q7RTT4 187 aa9.6□□□□□ -0.87
COL25A1-202ENST00000399127 ZNF429Q86V71 674 aa9.6□□□□□ -0.87
COL25A1-202ENST00000399127 ZNF709Q8N972 641 aa9.6□□□□□ -0.87
COL25A1-202ENST00000399127 RAB39BQ96DA2 213 aa9.6□□□□□ -0.87
COL25A1-202ENST00000399127 NUDT11Q96G61 164 aa9.6□□□□□ -0.87
COL25A1-202ENST00000399127 VPS25Q9BRG1 176 aa9.6□□□□□ -0.87
COL25A1-202ENST00000399127 SMDT1Q9H4I9 107 aa9.6□□□□□ -0.87
COL25A1-202ENST00000399127 COL12A1Q99715 3063 aa9.6□□□□□ -0.87
COL25A1-202ENST00000399127 A0A087WWC5 75 aa9.6□□□□□ -0.87
COL25A1-202ENST00000399127 ALKBH7Q9BT30 221 aaPredicted RBP9.6□□□□□ -0.87
COL25A1-202ENST00000399127 MRPL20Q9BYC9 149 aaKnown RBP9.6□□□□□ -0.87
COL25A1-202ENST00000399127 SLC35D1Q9NTN3 355 aa9.6□□□□□ -0.87
COL25A1-202ENST00000399127 POLR3KQ9Y2Y1 108 aaPredicted RBP9.6□□□□□ -0.87
COL25A1-202ENST00000399127 TIMM9Q9Y5J7 89 aa9.6□□□□□ -0.87
COL25A1-202ENST00000399127 NDUFS8O00217 210 aa9.59□□□□□ -0.87
COL25A1-202ENST00000399127 GNLYP22749 145 aa9.59□□□□□ -0.87
COL25A1-202ENST00000399127 COL5A1-AS1Q5SY13 56 aa9.59□□□□□ -0.87
COL25A1-202ENST00000399127 LHFPL4Q7Z7J7 247 aa9.59□□□□□ -0.87
COL25A1-202ENST00000399127 OR5T1Q8NG75 326 aa9.59□□□□□ -0.87
COL25A1-202ENST00000399127 OR1P1Q8NH06 330 aa9.59□□□□□ -0.87
COL25A1-202ENST00000399127 GATAD1Q8WUU5 269 aa9.59□□□□□ -0.87
COL25A1-202ENST00000399127 TNFRSF14Q92956 283 aa9.59□□□□□ -0.87
COL25A1-202ENST00000399127 CSTL1Q9H114 145 aa9.59□□□□□ -0.87
COL25A1-202ENST00000399127 MALRD1Q5VYJ5 2156 aa9.59□□□□□ -0.87
COL25A1-202ENST00000399127 LOXP28300 417 aaPredicted RBP9.59□□□□□ -0.87
COL25A1-202ENST00000399127 MEF2CQ06413 473 aaPredicted RBP9.59□□□□□ -0.87
COL25A1-202ENST00000399127 VWC2Q2TAL6 325 aa9.59□□□□□ -0.87
COL25A1-202ENST00000399127 CENPVQ7Z7K6 275 aaPredicted RBP9.59□□□□□ -0.87
COL25A1-202ENST00000399127 MUC15Q8N387 334 aa9.59□□□□□ -0.87
COL25A1-202ENST00000399127 OR52E5Q8NH55 327 aa9.59□□□□□ -0.87
COL25A1-202ENST00000399127 ADTRPQ96IZ2 230 aa9.59□□□□□ -0.87
COL25A1-202ENST00000399127 HIVEP3Q5T1R4 2406 aa9.59□□□□□ -0.87
COL25A1-202ENST00000399127 CSMD1Q96PZ7 3565 aa9.59□□□□□ -0.87
COL25A1-202ENST00000399127 B9A039 149 aa9.58□□□□□ -0.88
COL25A1-202ENST00000399127 TNFRSF13BO14836 293 aaPredicted RBP9.58□□□□□ -0.88
COL25A1-202ENST00000399127 LY6HO94772 140 aa9.58□□□□□ -0.88
COL25A1-202ENST00000399127 HRASP01112 189 aa9.58□□□□□ -0.88
COL25A1-202ENST00000399127 RTL8BQ17RB0 113 aa9.58□□□□□ -0.88
COL25A1-202ENST00000399127 OR10X1Q8NGY0 326 aa9.58□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms