RNA–Protein interactions for RNA: ENST00000399126.1

COL25A1-201, Transcript of collagen type XXV alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL25A1, Length 2,674 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL25A1-201ENST00000399126 RPS16P62249 146 aaKnown RBP12.33□□□□□ -0.44
COL25A1-201ENST00000399126 ARL16Q0P5N6 197 aa12.33□□□□□ -0.44
COL25A1-201ENST00000399126 GFI1BQ5VTD9 330 aa12.33□□□□□ -0.44
COL25A1-201ENST00000399126 WDR25Q64LD2 544 aaPredicted RBP12.33□□□□□ -0.44
COL25A1-201ENST00000399126 ZNF843Q8N446 348 aa12.33□□□□□ -0.44
COL25A1-201ENST00000399126 ZNF436-AS1Q8NC38 126 aaPredicted RBP12.33□□□□□ -0.44
COL25A1-201ENST00000399126 NEU4Q8WWR8 484 aaPredicted RBP12.33□□□□□ -0.44
COL25A1-201ENST00000399126 RCC1LQ96I51 464 aaKnown RBP12.33□□□□□ -0.44
COL25A1-201ENST00000399126 RAB40CQ96S21 281 aa12.33□□□□□ -0.44
COL25A1-201ENST00000399126 QTRT1Q9BXR0 403 aaKnown RBP12.33□□□□□ -0.44
COL25A1-201ENST00000399126 MRPL20Q9BYC9 149 aaKnown RBP12.33□□□□□ -0.44
COL25A1-201ENST00000399126 HSPB7Q9UBY9 170 aa12.33□□□□□ -0.44
COL25A1-201ENST00000399126 SSX7Q7RTT5 188 aa12.32□□□□□ -0.44
COL25A1-201ENST00000399126 HAPLN4Q86UW8 402 aa12.32□□□□□ -0.44
COL25A1-201ENST00000399126 HRH4Q9H3N8 390 aa12.32□□□□□ -0.44
COL25A1-201ENST00000399126 LPAR2Q9HBW0 351 aa12.32□□□□□ -0.44
COL25A1-201ENST00000399126 CTNNBIP1Q9NSA3 81 aaPredicted RBP12.32□□□□□ -0.44
COL25A1-201ENST00000399126 PSENENQ9NZ42 101 aa12.32□□□□□ -0.44
COL25A1-201ENST00000399126 LPAR3Q9UBY5 353 aa12.32□□□□□ -0.44
COL25A1-201ENST00000399126 FBN2P35556 2912 aa12.32□□□□□ -0.44
COL25A1-201ENST00000399126 PLXNB1O43157 2135 aa12.32□□□□□ -0.44
COL25A1-201ENST00000399126 POLQO75417 2590 aa12.32□□□□□ -0.44
COL25A1-201ENST00000399126 K7EP13 123 aa12.32□□□□□ -0.44
COL25A1-201ENST00000399126 MMP9P14780 707 aa12.32□□□□□ -0.44
COL25A1-201ENST00000399126 ID1P41134 155 aa12.32□□□□□ -0.44
COL25A1-201ENST00000399126 TMEM30BQ3MIR4 351 aa12.32□□□□□ -0.44
COL25A1-201ENST00000399126 OXLD1Q5BKU9 147 aa12.32□□□□□ -0.44
COL25A1-201ENST00000399126 SPANXN5Q5MJ07 72 aa12.32□□□□□ -0.44
COL25A1-201ENST00000399126 SAT2Q96F10 170 aaPredicted RBP12.32□□□□□ -0.44
COL25A1-201ENST00000399126 WSB1Q9Y6I7 421 aa12.32□□□□□ -0.44
COL25A1-201ENST00000399126 FAM157AC9JC47 383 aa12.31□□□□□ -0.44
COL25A1-201ENST00000399126 J3QR06 171 aa12.31□□□□□ -0.44
COL25A1-201ENST00000399126 HIST1H2BKO60814 126 aa12.31□□□□□ -0.44
COL25A1-201ENST00000399126 HIST1H2BJP06899 126 aa12.31□□□□□ -0.44
COL25A1-201ENST00000399126 HIST1H2BOP23527 126 aa12.31□□□□□ -0.44
COL25A1-201ENST00000399126 HIST1H2BBP33778 126 aa12.31□□□□□ -0.44
COL25A1-201ENST00000399126 THBS3P49746 956 aa12.31□□□□□ -0.44
COL25A1-201ENST00000399126 DVL1P1P54792 670 aaPredicted RBP12.31□□□□□ -0.44
COL25A1-201ENST00000399126 HIST1H2BDP58876 126 aa12.31□□□□□ -0.44
COL25A1-201ENST00000399126 ERVFC1-1P60608 527 aa12.31□□□□□ -0.44
COL25A1-201ENST00000399126 RPL23AP62750 156 aaKnown RBP12.31□□□□□ -0.44
COL25A1-201ENST00000399126 HIST1H2BCP62807 126 aa12.31□□□□□ -0.44
COL25A1-201ENST00000399126 HIST2H2BEQ16778 126 aa12.31□□□□□ -0.44
COL25A1-201ENST00000399126 HIST2H2BFQ5QNW6 126 aaPredicted RBP12.31□□□□□ -0.44
COL25A1-201ENST00000399126 OR4S2Q8NH73 311 aa12.31□□□□□ -0.44
COL25A1-201ENST00000399126 RNASEH2CQ8TDP1 164 aaKnown RBP12.31□□□□□ -0.44
COL25A1-201ENST00000399126 HIST1H2BHQ93079 126 aa12.31□□□□□ -0.44
COL25A1-201ENST00000399126 HIST1H2BNQ99877 126 aa12.31□□□□□ -0.44
COL25A1-201ENST00000399126 HIST1H2BMQ99879 126 aa12.31□□□□□ -0.44
COL25A1-201ENST00000399126 SLC25A31Q9H0C2 315 aa12.31□□□□□ -0.44
COL25A1-201ENST00000399126 DNAJC4Q9NNZ3 241 aa12.31□□□□□ -0.44
COL25A1-201ENST00000399126 RBFOX2O43251 390 aaKnown RBP eCLIP12.31□□□□□ -0.44
COL25A1-201ENST00000399126 ARL3P36405 182 aa12.31□□□□□ -0.44
COL25A1-201ENST00000399126 ZNF833PQ6ZTB9 187 aa12.31□□□□□ -0.44
COL25A1-201ENST00000399126 OR8B3Q8NGG8 313 aa12.31□□□□□ -0.44
COL25A1-201ENST00000399126 OR10X1Q8NGY0 326 aa12.31□□□□□ -0.44
COL25A1-201ENST00000399126 RAB1CQ92928 201 aa12.31□□□□□ -0.44
COL25A1-201ENST00000399126 YPEL4Q96NS1 127 aa12.31□□□□□ -0.44
COL25A1-201ENST00000399126 OR8B2Q96RD0 313 aa12.31□□□□□ -0.44
COL25A1-201ENST00000399126 ARV1Q9H2C2 271 aa12.31□□□□□ -0.44
COL25A1-201ENST00000399126 PPIAL4CA0A0B4J2A2 164 aa12.3□□□□□ -0.44
COL25A1-201ENST00000399126 FSTL3O95633 263 aa12.3□□□□□ -0.44
COL25A1-201ENST00000399126 PPIAL4GP0DN37 164 aa12.3□□□□□ -0.44
COL25A1-201ENST00000399126 MYOD1P15172 320 aa12.3□□□□□ -0.44
COL25A1-201ENST00000399126 ABHD12Q8N2K0 398 aa12.3□□□□□ -0.44
COL25A1-201ENST00000399126 CFHR4Q92496 578 aa12.3□□□□□ -0.44
COL25A1-201ENST00000399126 NEIL1Q96FI4 390 aaPredicted RBP12.3□□□□□ -0.44
COL25A1-201ENST00000399126 TIMD4Q96H15 378 aa12.3□□□□□ -0.44
COL25A1-201ENST00000399126 FBLL1A6NHQ2 334 aaKnown RBP12.3□□□□□ -0.44
COL25A1-201ENST00000399126 SRRM4A7MD48 611 aaKnown RBP12.3□□□□□ -0.44
COL25A1-201ENST00000399126 RUNX1Q01196 453 aa12.3□□□□□ -0.44
COL25A1-201ENST00000399126 HIST1H2BLQ99880 126 aa12.3□□□□□ -0.44
COL25A1-201ENST00000399126 FAM90A26D6RGX4 464 aa12.29□□□□□ -0.44
COL25A1-201ENST00000399126 OR2C1O95371 312 aa12.29□□□□□ -0.44
COL25A1-201ENST00000399126 OR4C12Q96R67 309 aa12.29□□□□□ -0.44
COL25A1-201ENST00000399126 GINS3Q9BRX5 216 aa12.29□□□□□ -0.44
COL25A1-201ENST00000399126 TMEM133Q9H2Q1 129 aa12.29□□□□□ -0.44
COL25A1-201ENST00000399126 BORCS7-ASMTA0A0B4J1R7 106 aa12.29□□□□□ -0.44
COL25A1-201ENST00000399126 CBY3A6NI87 242 aa12.29□□□□□ -0.44
COL25A1-201ENST00000399126 C9JQL5 133 aa12.29□□□□□ -0.44
COL25A1-201ENST00000399126 RELBQ01201 579 aa12.29□□□□□ -0.44
COL25A1-201ENST00000399126 OR4A47Q6IF82 309 aa12.29□□□□□ -0.44
COL25A1-201ENST00000399126 DFFBO76075 338 aa12.28□□□□□ -0.44
COL25A1-201ENST00000399126 KIR2DS2P43631 304 aa12.28□□□□□ -0.44
COL25A1-201ENST00000399126 ERVK-16P61578 105 aa12.28□□□□□ -0.44
COL25A1-201ENST00000399126 BAXQ07812 192 aa12.28□□□□□ -0.44
COL25A1-201ENST00000399126 RNF151Q2KHN1 245 aa12.28□□□□□ -0.44
COL25A1-201ENST00000399126 ZNF525Q8N782 197 aa12.28□□□□□ -0.44
COL25A1-201ENST00000399126 OR13D1Q8NGV5 346 aa12.28□□□□□ -0.44
COL25A1-201ENST00000399126 ONECUT1Q9UBC0 465 aa12.28□□□□□ -0.44
COL25A1-201ENST00000399126 ZFP30Q9Y2G7 519 aa12.28□□□□□ -0.44
COL25A1-201ENST00000399126 CEBPZOSA8MTT3 80 aa12.28□□□□□ -0.44
COL25A1-201ENST00000399126 COX7A1P24310 79 aa12.28□□□□□ -0.44
COL25A1-201ENST00000399126 GNB2P62879 340 aa12.28□□□□□ -0.44
COL25A1-201ENST00000399126 OR8G2PQ6IF36 304 aa12.28□□□□□ -0.44
COL25A1-201ENST00000399126 BOD1L2Q8IYS8 172 aa12.28□□□□□ -0.44
COL25A1-201ENST00000399126 OR4A16Q8NH70 328 aa12.28□□□□□ -0.44
COL25A1-201ENST00000399126 OR9G1Q8NH87 305 aa12.28□□□□□ -0.44
COL25A1-201ENST00000399126 ST6GALNAC6Q969X2 333 aa12.28□□□□□ -0.44
COL25A1-201ENST00000399126 NAV3Q8IVL0 2385 aa12.27□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms