RNA–Protein interactions for RNA: ENST00000398417.6

SMAD4-202, Transcript of SMAD family member 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SMAD4, Length 8,495 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-202ENST00000398417 HSD17B10Q99714 261 aaKnown RBP4.12□□□□□ -1.75
SMAD4-202ENST00000398417 PARLQ9H300 379 aa4.12□□□□□ -1.75
SMAD4-202ENST00000398417 SSUH2Q9Y2M2 353 aa4.12□□□□□ -1.75
SMAD4-202ENST00000398417 PXMP4Q9Y6I8 212 aa4.12□□□□□ -1.75
SMAD4-202ENST00000398417 SOD3P08294 240 aa4.12□□□□□ -1.75
SMAD4-202ENST00000398417 PNRC1Q12796 327 aaPredicted RBP4.12□□□□□ -1.75
SMAD4-202ENST00000398417 PRR31Q5SQ13 230 aa4.12□□□□□ -1.75
SMAD4-202ENST00000398417 ZNF497Q6ZNH5 498 aa4.12□□□□□ -1.75
SMAD4-202ENST00000398417 DENND4CQ5VZ89 1909 aa4.12□□□□□ -1.75
SMAD4-202ENST00000398417 IGHV1-18A0A0C4DH31 117 aa4.12□□□□□ -1.75
SMAD4-202ENST00000398417 GATA2P23769 480 aaPredicted RBP4.12□□□□□ -1.75
SMAD4-202ENST00000398417 Q56UQ5 140 aa4.12□□□□□ -1.75
SMAD4-202ENST00000398417 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa4.12□□□□□ -1.75
SMAD4-202ENST00000398417 SRD5A3Q9H8P0 318 aa4.12□□□□□ -1.75
SMAD4-202ENST00000398417 IGHV3-21A0A0B4J1V1 117 aa4.12□□□□□ -1.75
SMAD4-202ENST00000398417 TMEM238LA0A1B0GVL6 79 aa4.12□□□□□ -1.75
SMAD4-202ENST00000398417 A0A1B0GW64 132 aa4.12□□□□□ -1.75
SMAD4-202ENST00000398417 FAM157AC9JC47 383 aa4.12□□□□□ -1.75
SMAD4-202ENST00000398417 IGKV1D-33P01593 117 aa4.12□□□□□ -1.75
SMAD4-202ENST00000398417 IGKV1-33P01594 117 aa4.12□□□□□ -1.75
SMAD4-202ENST00000398417 TDGF1P13385 188 aa4.12□□□□□ -1.75
SMAD4-202ENST00000398417 FAM216BQ8N7L0 139 aa4.12□□□□□ -1.75
SMAD4-202ENST00000398417 OR2T10Q8NGZ9 312 aa4.12□□□□□ -1.75
SMAD4-202ENST00000398417 DPH3Q96FX2 82 aa4.12□□□□□ -1.75
SMAD4-202ENST00000398417 C11orf1Q9H5F2 150 aa4.12□□□□□ -1.75
SMAD4-202ENST00000398417 METTL1Q9UBP6 276 aaKnown RBP4.12□□□□□ -1.75
SMAD4-202ENST00000398417 DMRT1Q9Y5R6 373 aa4.12□□□□□ -1.75
SMAD4-202ENST00000398417 CDX4O14627 284 aaPredicted RBP4.12□□□□□ -1.75
SMAD4-202ENST00000398417 MLNRO43193 412 aa4.12□□□□□ -1.75
SMAD4-202ENST00000398417 RAMP3O60896 148 aa4.12□□□□□ -1.75
SMAD4-202ENST00000398417 SS18L1O75177 396 aaPredicted RBP4.12□□□□□ -1.75
SMAD4-202ENST00000398417 CT45A6P0DMU7 189 aa4.12□□□□□ -1.75
SMAD4-202ENST00000398417 CT45A5P0DMU8 189 aa4.12□□□□□ -1.75
SMAD4-202ENST00000398417 CT45A7P0DMV0 189 aa4.12□□□□□ -1.75
SMAD4-202ENST00000398417 GZMHP20718 246 aa4.12□□□□□ -1.75
SMAD4-202ENST00000398417 FCGR2BP31994 310 aaPredicted RBP4.12□□□□□ -1.75
SMAD4-202ENST00000398417 CACNG7P62955 275 aa4.12□□□□□ -1.75
SMAD4-202ENST00000398417 P2RY6Q15077 328 aa4.12□□□□□ -1.75
SMAD4-202ENST00000398417 PSG5Q15238 335 aa4.12□□□□□ -1.75
SMAD4-202ENST00000398417 CT45A1Q5HYN5 189 aa4.12□□□□□ -1.75
SMAD4-202ENST00000398417 SLC35E4Q6ICL7 350 aa4.12□□□□□ -1.75
SMAD4-202ENST00000398417 OR1L6Q8NGR2 347 aa4.12□□□□□ -1.75
SMAD4-202ENST00000398417 OR1P1Q8NH06 330 aa4.12□□□□□ -1.75
SMAD4-202ENST00000398417 CT45A3Q8NHU0 189 aa4.12□□□□□ -1.75
SMAD4-202ENST00000398417 C5orf30Q96GV9 206 aa4.12□□□□□ -1.75
SMAD4-202ENST00000398417 CALYQ9NYX4 217 aa4.12□□□□□ -1.75
SMAD4-202ENST00000398417 A0A1W2PRD5 423 aa4.11□□□□□ -1.75
SMAD4-202ENST00000398417 A0A1W2PRF3 423 aa4.11□□□□□ -1.75
SMAD4-202ENST00000398417 A0A1W2PRM7 423 aa4.11□□□□□ -1.75
SMAD4-202ENST00000398417 CEACAM1P13688 526 aa4.11□□□□□ -1.75
SMAD4-202ENST00000398417 CD82P27701 267 aa4.11□□□□□ -1.75
SMAD4-202ENST00000398417 SERF2P84101 59 aa4.11□□□□□ -1.75
SMAD4-202ENST00000398417 PMVKQ15126 192 aa4.11□□□□□ -1.75
SMAD4-202ENST00000398417 SLC35E3Q7Z769 313 aa4.11□□□□□ -1.75
SMAD4-202ENST00000398417 C1QL4Q86Z23 238 aa4.11□□□□□ -1.75
SMAD4-202ENST00000398417 NPCDR1Q9BY65 106 aa4.11□□□□□ -1.75
SMAD4-202ENST00000398417 JPT1Q9UK76 154 aa4.11□□□□□ -1.75
SMAD4-202ENST00000398417 NDUFC2-KCTD14E9PQ53 114 aa4.11□□□□□ -1.75
SMAD4-202ENST00000398417 ORM2P19652 201 aa4.11□□□□□ -1.75
SMAD4-202ENST00000398417 FAM27E3Q08E93 113 aa4.11□□□□□ -1.75
SMAD4-202ENST00000398417 CDPF1Q6NVV7 123 aa4.11□□□□□ -1.75
SMAD4-202ENST00000398417 OR1L8Q8NGR8 309 aa4.11□□□□□ -1.75
SMAD4-202ENST00000398417 EDARADDQ8WWZ3 215 aa4.11□□□□□ -1.75
SMAD4-202ENST00000398417 IMMP2LQ96T52 175 aa4.11□□□□□ -1.75
SMAD4-202ENST00000398417 P2RX4Q99571 388 aa4.11□□□□□ -1.75
SMAD4-202ENST00000398417 IGHV3-72A0A0B4J1Y9 119 aa4.11□□□□□ -1.75
SMAD4-202ENST00000398417 RRHO14718 337 aa4.11□□□□□ -1.75
SMAD4-202ENST00000398417 NPFFO15130 113 aa4.11□□□□□ -1.75
SMAD4-202ENST00000398417 FTH1P19P0C7X4 201 aa4.11□□□□□ -1.75
SMAD4-202ENST00000398417 CD33P20138 364 aa4.11□□□□□ -1.75
SMAD4-202ENST00000398417 WDR82Q6UXN9 313 aa4.11□□□□□ -1.75
SMAD4-202ENST00000398417 OR2V2Q96R30 315 aa4.11□□□□□ -1.75
SMAD4-202ENST00000398417 PRRC2AP48634 2157 aaKnown RBP4.11□□□□□ -1.75
SMAD4-202ENST00000398417 LINC00473A8K010 186 aa4.11□□□□□ -1.75
SMAD4-202ENST00000398417 OR5G3P0C626 314 aa4.11□□□□□ -1.75
SMAD4-202ENST00000398417 SRP14P37108 136 aaKnown RBP4.11□□□□□ -1.75
SMAD4-202ENST00000398417 KLF3P57682 345 aaPredicted RBP4.11□□□□□ -1.75
SMAD4-202ENST00000398417 Q6ZR03 302 aa4.11□□□□□ -1.75
SMAD4-202ENST00000398417 RBPMS2Q6ZRY4 209 aaKnown RBP4.11□□□□□ -1.75
SMAD4-202ENST00000398417 IDI2-AS1Q9NZ38 188 aa4.11□□□□□ -1.75
SMAD4-202ENST00000398417 H3BVH4 76 aa4.11□□□□□ -1.75
SMAD4-202ENST00000398417 KIR2DL2P43627 348 aaPredicted RBP4.11□□□□□ -1.75
SMAD4-202ENST00000398417 CAMPP49913 170 aa4.11□□□□□ -1.75
SMAD4-202ENST00000398417 DUX4L9Q6RFH8 374 aaPredicted RBP4.11□□□□□ -1.75
SMAD4-202ENST00000398417 TOMM20LQ6UXN7 152 aa4.11□□□□□ -1.75
SMAD4-202ENST00000398417 Q6ZS49 121 aa4.11□□□□□ -1.75
SMAD4-202ENST00000398417 LYPD6BQ8NI32 183 aa4.11□□□□□ -1.75
SMAD4-202ENST00000398417 SLC35E1Q96K37 410 aa4.11□□□□□ -1.75
SMAD4-202ENST00000398417 TCF19Q9Y242 345 aa4.11□□□□□ -1.75
SMAD4-202ENST00000398417 TRGV10A0A0A0MS01 117 aa4.11□□□□□ -1.75
SMAD4-202ENST00000398417 IGHV2OR16-5A0A0B4J2B6 119 aa4.11□□□□□ -1.75
SMAD4-202ENST00000398417 A6NJY4 79 aa4.11□□□□□ -1.75
SMAD4-202ENST00000398417 HOXA6P31267 233 aa4.11□□□□□ -1.75
SMAD4-202ENST00000398417 C1orf185Q5T7R7 199 aa4.11□□□□□ -1.75
SMAD4-202ENST00000398417 PEAR1Q5VY43 1037 aaPredicted RBP4.11□□□□□ -1.75
SMAD4-202ENST00000398417 CFAP161Q6P656 301 aa4.11□□□□□ -1.75
SMAD4-202ENST00000398417 MIR17HGQ75NE6 70 aa4.11□□□□□ -1.75
SMAD4-202ENST00000398417 SMDT1Q9H4I9 107 aa4.11□□□□□ -1.75
SMAD4-202ENST00000398417 SEBOXQ9HB31 216 aaPredicted RBP4.11□□□□□ -1.75
SMAD4-202ENST00000398417 FAM90A26D6RGX4 464 aa4.11□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 74.3 ms