RNA–Protein interactions for RNA: ENST00000398145.6

HPS4-202, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HPS4, Length 4,497 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-202ENST00000398145 UMODP07911 640 aa9.27□□□□□ -0.93
HPS4-202ENST00000398145 GATA2P23769 480 aaPredicted RBP9.27□□□□□ -0.93
HPS4-202ENST00000398145 SPEM2Q0P670 501 aa9.27□□□□□ -0.93
HPS4-202ENST00000398145 EFNB3Q15768 340 aa9.27□□□□□ -0.93
HPS4-202ENST00000398145 Q6ZT83 130 aa9.27□□□□□ -0.93
HPS4-202ENST00000398145 LINC00305Q7Z4B0 112 aa9.27□□□□□ -0.93
HPS4-202ENST00000398145 STAG3L2P0CL84 134 aa9.27□□□□□ -0.93
HPS4-202ENST00000398145 STAG3L3P0CL85 134 aa9.27□□□□□ -0.93
HPS4-202ENST00000398145 RPL7P18124 248 aaKnown RBP9.27□□□□□ -0.93
HPS4-202ENST00000398145 RPL13AP40429 203 aaKnown RBP9.27□□□□□ -0.93
HPS4-202ENST00000398145 C5orf24Q7Z6I8 188 aa9.27□□□□□ -0.93
HPS4-202ENST00000398145 SIGLEC12Q96PQ1 595 aa9.27□□□□□ -0.93
HPS4-202ENST00000398145 PILRBQ9UKJ0 227 aa9.27□□□□□ -0.93
HPS4-202ENST00000398145 HIGD1CA8MV81 97 aa9.27□□□□□ -0.93
HPS4-202ENST00000398145 F5H697 171 aa9.27□□□□□ -0.93
HPS4-202ENST00000398145 BMI1P35226 326 aa9.27□□□□□ -0.93
HPS4-202ENST00000398145 ARF6P62330 175 aa9.27□□□□□ -0.93
HPS4-202ENST00000398145 IL15RAQ13261 267 aa9.27□□□□□ -0.93
HPS4-202ENST00000398145 OR10J3Q5JRS4 329 aa9.27□□□□□ -0.93
HPS4-202ENST00000398145 Q6ZS49 121 aa9.27□□□□□ -0.93
HPS4-202ENST00000398145 GOLT1AQ6ZVE7 132 aa9.27□□□□□ -0.93
HPS4-202ENST00000398145 CACNG8Q8WXS5 425 aa9.27□□□□□ -0.93
HPS4-202ENST00000398145 MRPS18CQ9Y3D5 142 aaKnown RBP9.27□□□□□ -0.93
HPS4-202ENST00000398145 FER1L5A0AVI2 2057 aa9.26□□□□□ -0.93
HPS4-202ENST00000398145 PPIHO43447 177 aaKnown RBP9.26□□□□□ -0.93
HPS4-202ENST00000398145 GDF9O60383 454 aa9.26□□□□□ -0.93
HPS4-202ENST00000398145 PFN1P07737 140 aaKnown RBP9.26□□□□□ -0.93
HPS4-202ENST00000398145 LINC00614P0C842 121 aa9.26□□□□□ -0.93
HPS4-202ENST00000398145 CSRP1P21291 193 aaKnown RBP9.26□□□□□ -0.93
HPS4-202ENST00000398145 C17orf82Q86X59 251 aaPredicted RBP9.26□□□□□ -0.93
HPS4-202ENST00000398145 ZNF436-AS1Q8NC38 126 aaPredicted RBP9.26□□□□□ -0.93
HPS4-202ENST00000398145 DERL1Q9BUN8 251 aa9.26□□□□□ -0.93
HPS4-202ENST00000398145 A0A1W2PRE2 83 aa9.26□□□□□ -0.93
HPS4-202ENST00000398145 RBFOX2O43251 390 aaKnown RBP eCLIP9.26□□□□□ -0.93
HPS4-202ENST00000398145 GPR6P46095 362 aaPredicted RBP9.26□□□□□ -0.93
HPS4-202ENST00000398145 OSR1Q8TAX0 266 aaPredicted RBP9.26□□□□□ -0.93
HPS4-202ENST00000398145 ELOVL5Q9NYP7 299 aa9.26□□□□□ -0.93
HPS4-202ENST00000398145 SOX21Q9Y651 276 aaPredicted RBP9.26□□□□□ -0.93
HPS4-202ENST00000398145 PLXNA4Q9HCM2 1894 aa9.26□□□□□ -0.93
HPS4-202ENST00000398145 A0A0G2JRQ6 117 aa9.26□□□□□ -0.93
HPS4-202ENST00000398145 A0A1W2PRD5 423 aa9.26□□□□□ -0.93
HPS4-202ENST00000398145 A0A1W2PRF3 423 aa9.26□□□□□ -0.93
HPS4-202ENST00000398145 A0A1W2PRM7 423 aa9.26□□□□□ -0.93
HPS4-202ENST00000398145 AHRRA9YTQ3 701 aa9.26□□□□□ -0.93
HPS4-202ENST00000398145 CD33P20138 364 aa9.26□□□□□ -0.93
HPS4-202ENST00000398145 CD40P25942 277 aa9.26□□□□□ -0.93
HPS4-202ENST00000398145 TRIP6Q15654 476 aaKnown RBP9.26□□□□□ -0.93
HPS4-202ENST00000398145 RNASEH2CQ8TDP1 164 aaKnown RBP9.26□□□□□ -0.93
HPS4-202ENST00000398145 A1L4Q6 167 aa9.25□□□□□ -0.93
HPS4-202ENST00000398145 WIPF3A6NGB9 483 aa9.25□□□□□ -0.93
HPS4-202ENST00000398145 EREGO14944 169 aa9.25□□□□□ -0.93
HPS4-202ENST00000398145 HERVK_113P61574 105 aa9.25□□□□□ -0.93
HPS4-202ENST00000398145 ASCL4Q6XD76 172 aa9.25□□□□□ -0.93
HPS4-202ENST00000398145 Q6ZRM9 215 aa9.25□□□□□ -0.93
HPS4-202ENST00000398145 RAB1CQ92928 201 aa9.25□□□□□ -0.93
HPS4-202ENST00000398145 ZNF524Q96C55 264 aa9.25□□□□□ -0.93
HPS4-202ENST00000398145 C16orf97H3BN30 126 aa9.25□□□□□ -0.93
HPS4-202ENST00000398145 KLK10O43240 276 aa9.25□□□□□ -0.93
HPS4-202ENST00000398145 TREML4Q6UXN2 200 aa9.25□□□□□ -0.93
HPS4-202ENST00000398145 TCF24Q7RTU0 167 aa9.25□□□□□ -0.93
HPS4-202ENST00000398145 GPR82Q96P67 336 aa9.25□□□□□ -0.93
HPS4-202ENST00000398145 TMEM208Q9BTX3 173 aa9.25□□□□□ -0.93
HPS4-202ENST00000398145 TMUB1Q9BVT8 246 aa9.25□□□□□ -0.93
HPS4-202ENST00000398145 GGTLC1Q9BX51 225 aa9.25□□□□□ -0.93
HPS4-202ENST00000398145 CLEC5AQ9NY25 188 aa9.25□□□□□ -0.93
HPS4-202ENST00000398145 FNDC1Q4ZHG4 1894 aaPredicted RBP9.25□□□□□ -0.93
HPS4-202ENST00000398145 IQCF6A8MYZ5 107 aa9.25□□□□□ -0.93
HPS4-202ENST00000398145 TMEM50AO95807 157 aa9.25□□□□□ -0.93
HPS4-202ENST00000398145 REG1AP05451 166 aa9.25□□□□□ -0.93
HPS4-202ENST00000398145 LGALS7P47929 136 aa9.25□□□□□ -0.93
HPS4-202ENST00000398145 FBLN7Q53RD9 439 aa9.25□□□□□ -0.93
HPS4-202ENST00000398145 SPANXN1Q5VSR9 72 aa9.25□□□□□ -0.93
HPS4-202ENST00000398145 TMEM136Q6ZRR5 245 aa9.25□□□□□ -0.93
HPS4-202ENST00000398145 HELZP42694 1942 aaKnown RBP9.25□□□□□ -0.93
HPS4-202ENST00000398145 E9PLN8 166 aa9.25□□□□□ -0.93
HPS4-202ENST00000398145 MOSP00540 346 aa9.25□□□□□ -0.93
HPS4-202ENST00000398145 DIRC2Q96SL1 478 aa9.25□□□□□ -0.93
HPS4-202ENST00000398145 RPP21Q9H633 154 aaKnown RBP9.25□□□□□ -0.93
HPS4-202ENST00000398145 C1RLQ9NZP8 487 aa9.25□□□□□ -0.93
HPS4-202ENST00000398145 ANAPC1Q9H1A4 1944 aa9.24□□□□□ -0.93
HPS4-202ENST00000398145 A0A1B0GUT8 65 aa9.24□□□□□ -0.93
HPS4-202ENST00000398145 DUTP33316 252 aaKnown RBP9.24□□□□□ -0.93
HPS4-202ENST00000398145 PSMB2P49721 201 aa9.24□□□□□ -0.93
HPS4-202ENST00000398145 TMEM186Q96B77 213 aa9.24□□□□□ -0.93
HPS4-202ENST00000398145 MAP1LC3AQ9H492 121 aa9.24□□□□□ -0.93
HPS4-202ENST00000398145 LIME1Q9H400 295 aa9.24□□□□□ -0.93
HPS4-202ENST00000398145 PKDREJQ9NTG1 2253 aa9.24□□□□□ -0.93
HPS4-202ENST00000398145 C15orf61A6NNL5 157 aa9.24□□□□□ -0.93
HPS4-202ENST00000398145 SNAI2O43623 268 aa9.24□□□□□ -0.93
HPS4-202ENST00000398145 YPEL1O60688 119 aa9.24□□□□□ -0.93
HPS4-202ENST00000398145 WISP1O95388 367 aa9.24□□□□□ -0.93
HPS4-202ENST00000398145 CD3EP07766 207 aa9.24□□□□□ -0.93
HPS4-202ENST00000398145 OR9G9P0C7N8 305 aa9.24□□□□□ -0.93
HPS4-202ENST00000398145 CECR9P0C854 216 aa9.24□□□□□ -0.93
HPS4-202ENST00000398145 DEFB123Q8N688 67 aa9.24□□□□□ -0.93
HPS4-202ENST00000398145 LYPD6BQ8NI32 183 aa9.24□□□□□ -0.93
HPS4-202ENST00000398145 YPEL2Q96QA6 119 aa9.24□□□□□ -0.93
HPS4-202ENST00000398145 F11RQ9Y624 299 aaKnown RBP9.24□□□□□ -0.93
HPS4-202ENST00000398145 GPR179Q6PRD1 2367 aa9.24□□□□□ -0.93
HPS4-202ENST00000398145 INTS1Q8N201 2190 aaKnown RBP9.23□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 71 ms