RNA–Protein interactions for RNA: ENST00000397906.6

TTC28-201, Transcript of tetratricopeptide repeat domain 28, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene TTC28, Length 11,795 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28-201ENST00000397906 SNRNP200O75643 2136 aaKnown RBP9.5□□□□□ -0.89
TTC28-201ENST00000397906 ANK1P16157 1881 aa9.5□□□□□ -0.89
TTC28-201ENST00000397906 NBEAP1P0C6P0 100 aa9.5□□□□□ -0.89
TTC28-201ENST00000397906 OR5AN1Q8NGI8 311 aa9.5□□□□□ -0.89
TTC28-201ENST00000397906 NPCDR1Q9BY65 106 aa9.5□□□□□ -0.89
TTC28-201ENST00000397906 SDF2L1Q9HCN8 221 aa9.5□□□□□ -0.89
TTC28-201ENST00000397906 GCHFRP30047 84 aa9.5□□□□□ -0.89
TTC28-201ENST00000397906 SRIP30626 198 aa9.5□□□□□ -0.89
TTC28-201ENST00000397906 LY6HO94772 140 aa9.5□□□□□ -0.89
TTC28-201ENST00000397906 IGHV1-46P01743 117 aa9.5□□□□□ -0.89
TTC28-201ENST00000397906 ZNF672Q499Z4 452 aaPredicted RBP9.5□□□□□ -0.89
TTC28-201ENST00000397906 ALX4Q9H161 411 aaPredicted RBP9.5□□□□□ -0.89
TTC28-201ENST00000397906 MYOD1P15172 320 aa9.5□□□□□ -0.89
TTC28-201ENST00000397906 Q0VFX4 171 aa9.5□□□□□ -0.89
TTC28-201ENST00000397906 ATOH7Q8N100 152 aa9.5□□□□□ -0.89
TTC28-201ENST00000397906 FGFBP3Q8TAT2 258 aa9.5□□□□□ -0.89
TTC28-201ENST00000397906 SPATA45Q537H7 98 aa9.5□□□□□ -0.89
TTC28-201ENST00000397906 TMEM70Q9BUB7 260 aa9.5□□□□□ -0.89
TTC28-201ENST00000397906 CDC42EP3Q9UKI2 254 aa9.5□□□□□ -0.89
TTC28-201ENST00000397906 A0A087X0M5 115 aa9.5□□□□□ -0.89
TTC28-201ENST00000397906 A0A1B0GX30 115 aa9.5□□□□□ -0.89
TTC28-201ENST00000397906 WNT2P09544 360 aa9.5□□□□□ -0.89
TTC28-201ENST00000397906 TCF24Q7RTU0 167 aa9.5□□□□□ -0.89
TTC28-201ENST00000397906 GTF3AQ92664 365 aaKnown RBP9.5□□□□□ -0.89
TTC28-201ENST00000397906 PARLQ9H300 379 aa9.5□□□□□ -0.89
TTC28-201ENST00000397906 IGLV3-12A0A075B6K2 115 aa9.5□□□□□ -0.89
TTC28-201ENST00000397906 RIPPLY3P57055 190 aa9.5□□□□□ -0.89
TTC28-201ENST00000397906 SFRP2Q96HF1 295 aa9.5□□□□□ -0.89
TTC28-201ENST00000397906 COX6CP09669 75 aa9.49□□□□□ -0.89
TTC28-201ENST00000397906 TMEM160Q9NX00 188 aa9.49□□□□□ -0.89
TTC28-201ENST00000397906 TRGC2P03986 189 aa9.49□□□□□ -0.89
TTC28-201ENST00000397906 ZNF250P15622 560 aa9.49□□□□□ -0.89
TTC28-201ENST00000397906 ZNF436-AS1Q8NC38 126 aaPredicted RBP9.49□□□□□ -0.89
TTC28-201ENST00000397906 TMEM238LA0A1B0GVL6 79 aa9.49□□□□□ -0.89
TTC28-201ENST00000397906 A6NJY4 79 aa9.49□□□□□ -0.89
TTC28-201ENST00000397906 M0QZK8 103 aa9.49□□□□□ -0.89
TTC28-201ENST00000397906 OR52E5Q8NH55 327 aa9.49□□□□□ -0.89
TTC28-201ENST00000397906 WBP1Q96G27 269 aa9.49□□□□□ -0.89
TTC28-201ENST00000397906 HLA-DQA1P01909 254 aa9.49□□□□□ -0.89
TTC28-201ENST00000397906 C19orf24Q9BVV8 132 aa9.49□□□□□ -0.89
TTC28-201ENST00000397906 CRIM1Q9NZV1 1036 aa9.49□□□□□ -0.89
TTC28-201ENST00000397906 SAPCD1Q5SSQ6 148 aa9.49□□□□□ -0.89
TTC28-201ENST00000397906 C3orf56Q8N813 242 aa9.49□□□□□ -0.89
TTC28-201ENST00000397906 ALKBH7Q9BT30 221 aaPredicted RBP9.49□□□□□ -0.89
TTC28-201ENST00000397906 RALGAPA1Q6GYQ0 2036 aa9.49□□□□□ -0.89
TTC28-201ENST00000397906 LOC102723996A0A087X1L8 192 aa9.49□□□□□ -0.89
TTC28-201ENST00000397906 FOXC2Q99958 501 aa9.49□□□□□ -0.89
TTC28-201ENST00000397906 TRAV14DV4A0A0A6YYC5 116 aa9.48□□□□□ -0.89
TTC28-201ENST00000397906 NPIPB9F8W1W9 429 aa9.48□□□□□ -0.89
TTC28-201ENST00000397906 NPIPB7O75200 414 aa9.48□□□□□ -0.89
TTC28-201ENST00000397906 FOXA3P55318 350 aaPredicted RBP9.48□□□□□ -0.89
TTC28-201ENST00000397906 H7C1H1 209 aa9.48□□□□□ -0.89
TTC28-201ENST00000397906 AGAP20933 346 aa9.48□□□□□ -0.89
TTC28-201ENST00000397906 EFNA4P52798 201 aa9.48□□□□□ -0.89
TTC28-201ENST00000397906 DOCK6Q96HP0 2047 aa9.48□□□□□ -0.89
TTC28-201ENST00000397906 RPL35AP18077 110 aaKnown RBP9.48□□□□□ -0.89
TTC28-201ENST00000397906 GNG5P63218 68 aa9.48□□□□□ -0.89
TTC28-201ENST00000397906 FBLN7Q53RD9 439 aa9.48□□□□□ -0.89
TTC28-201ENST00000397906 FLVCR1-AS1Q8TAF5 88 aa9.48□□□□□ -0.89
TTC28-201ENST00000397906 FOXG1P55316 489 aaPredicted RBP9.48□□□□□ -0.89
TTC28-201ENST00000397906 FAM90A1Q86YD7 464 aa9.48□□□□□ -0.89
TTC28-201ENST00000397906 C2orf88Q9BSF0 95 aa9.48□□□□□ -0.89
TTC28-201ENST00000397906 REC114Q7Z4M0 266 aa9.48□□□□□ -0.89
TTC28-201ENST00000397906 C11orf68Q9H3H3 251 aaKnown RBP9.48□□□□□ -0.89
TTC28-201ENST00000397906 ZP1P60852 638 aa9.48□□□□□ -0.89
TTC28-201ENST00000397906 MORN2Q502X0 79 aa9.48□□□□□ -0.89
TTC28-201ENST00000397906 PSMG4Q5JS54 123 aa9.48□□□□□ -0.89
TTC28-201ENST00000397906 ZNF525Q8N782 197 aa9.48□□□□□ -0.89
TTC28-201ENST00000397906 OR10AG1Q8NH19 301 aa9.48□□□□□ -0.89
TTC28-201ENST00000397906 VGLL1Q99990 258 aa9.48□□□□□ -0.89
TTC28-201ENST00000397906 Q9H3A6 140 aa9.48□□□□□ -0.89
TTC28-201ENST00000397906 A0A087WV48 116 aa9.47□□□□□ -0.89
TTC28-201ENST00000397906 TRGV4A0A0C4DH28 118 aa9.47□□□□□ -0.89
TTC28-201ENST00000397906 C1QTNF9BB2RNN3 333 aa9.47□□□□□ -0.89
TTC28-201ENST00000397906 C1QTNF9P0C862 333 aa9.47□□□□□ -0.89
TTC28-201ENST00000397906 BIVMQ86UB2 503 aa9.47□□□□□ -0.89
TTC28-201ENST00000397906 SCO2A0A1W2PP80 73 aa9.47□□□□□ -0.89
TTC28-201ENST00000397906 RND3P61587 244 aa9.47□□□□□ -0.89
TTC28-201ENST00000397906 SP5Q6BEB4 398 aaPredicted RBP9.47□□□□□ -0.89
TTC28-201ENST00000397906 AQP10Q96PS8 301 aa9.47□□□□□ -0.89
TTC28-201ENST00000397906 C19orf67A6NJJ6 358 aa9.47□□□□□ -0.89
TTC28-201ENST00000397906 DSCR9P59020 149 aa9.47□□□□□ -0.89
TTC28-201ENST00000397906 CFAP161Q6P656 301 aa9.47□□□□□ -0.89
TTC28-201ENST00000397906 ZNF318Q5VUA4 2279 aa9.47□□□□□ -0.89
TTC28-201ENST00000397906 PEX7O00628 323 aa9.47□□□□□ -0.89
TTC28-201ENST00000397906 LINC00469Q8N7U9 141 aa9.47□□□□□ -0.89
TTC28-201ENST00000397906 RNF223E7ERA6 249 aa9.47□□□□□ -0.89
TTC28-201ENST00000397906 MLNRO43193 412 aa9.47□□□□□ -0.89
TTC28-201ENST00000397906 PAQR4Q8N4S7 273 aaPredicted RBP9.47□□□□□ -0.89
TTC28-201ENST00000397906 LYZL4Q96KX0 146 aa9.47□□□□□ -0.89
TTC28-201ENST00000397906 CRPP02741 224 aa9.47□□□□□ -0.89
TTC28-201ENST00000397906 UCP3P55916 312 aa9.47□□□□□ -0.89
TTC28-201ENST00000397906 ERVK11-1P61568 191 aa9.47□□□□□ -0.89
TTC28-201ENST00000397906 DOCK4Q8N1I0 1966 aa9.47□□□□□ -0.89
TTC28-201ENST00000397906 MIR17HGQ75NE6 70 aa9.47□□□□□ -0.89
TTC28-201ENST00000397906 NPDC1Q9NQX5 325 aaPredicted RBP9.47□□□□□ -0.89
TTC28-201ENST00000397906 HINT1P49773 126 aaPredicted RBP9.46□□□□□ -0.89
TTC28-201ENST00000397906 TMEM42Q69YG0 159 aa9.46□□□□□ -0.89
TTC28-201ENST00000397906 GATAD1Q8WUU5 269 aa9.46□□□□□ -0.89
TTC28-201ENST00000397906 DEFB104AQ8WTQ1 72 aa9.46□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 54.7 ms