RNA–Protein interactions for RNA: ENST00000397606.7

PTPRD-204, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

TSL 1 (best) BASIC

Gene PTPRD, Length 5,038 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-204ENST00000397606 FAM103A1Q9BTL3 118 aaKnown RBP6.76□□□□□ -1.33
PTPRD-204ENST00000397606 PAXXQ9BUH6 204 aa6.76□□□□□ -1.33
PTPRD-204ENST00000397606 HSPB7Q9UBY9 170 aa6.76□□□□□ -1.33
PTPRD-204ENST00000397606 RABAC1Q9UI14 185 aa6.76□□□□□ -1.33
PTPRD-204ENST00000397606 LAMA3Q16787 3333 aa6.76□□□□□ -1.33
PTPRD-204ENST00000397606 RBFOX3A6NFN3 312 aa6.76□□□□□ -1.33
PTPRD-204ENST00000397606 C15orf65H3BRN8 121 aa6.76□□□□□ -1.33
PTPRD-204ENST00000397606 GPX4P36969 197 aaPredicted RBP6.76□□□□□ -1.33
PTPRD-204ENST00000397606 ID1P41134 155 aa6.76□□□□□ -1.33
PTPRD-204ENST00000397606 MSMPQ1L6U9 139 aa6.76□□□□□ -1.33
PTPRD-204ENST00000397606 C5orf64Q2M2E5 130 aa6.76□□□□□ -1.33
PTPRD-204ENST00000397606 FAM209BQ5JX69 171 aa6.76□□□□□ -1.33
PTPRD-204ENST00000397606 MAPK1IP1LQ8NDC0 245 aa6.76□□□□□ -1.33
PTPRD-204ENST00000397606 CTSZQ9UBR2 303 aa6.76□□□□□ -1.33
PTPRD-204ENST00000397606 FOXA2Q9Y261 457 aaPredicted RBP6.76□□□□□ -1.33
PTPRD-204ENST00000397606 PTPN13Q12923 2485 aa6.76□□□□□ -1.33
PTPRD-204ENST00000397606 C1orf196B1AJZ1 125 aa6.76□□□□□ -1.33
PTPRD-204ENST00000397606 C19orf84I3L1E1 186 aa6.76□□□□□ -1.33
PTPRD-204ENST00000397606 DANCRP0C864 163 aa6.76□□□□□ -1.33
PTPRD-204ENST00000397606 SULT1A2P50226 295 aa6.76□□□□□ -1.33
PTPRD-204ENST00000397606 LY6G6FQ5SQ64 297 aa6.76□□□□□ -1.33
PTPRD-204ENST00000397606 SLC35B3Q9H1N7 401 aa6.76□□□□□ -1.33
PTPRD-204ENST00000397606 IGKV3-7A0A075B6H7 116 aa6.75□□□□□ -1.33
PTPRD-204ENST00000397606 SRD5A1P18405 259 aa6.75□□□□□ -1.33
PTPRD-204ENST00000397606 SPRNQ5BIV9 151 aa6.75□□□□□ -1.33
PTPRD-204ENST00000397606 ZNF660Q6AZW8 331 aaPredicted RBP6.75□□□□□ -1.33
PTPRD-204ENST00000397606 GATAD1Q8WUU5 269 aa6.75□□□□□ -1.33
PTPRD-204ENST00000397606 PSMG3Q9BT73 122 aaPredicted RBP6.75□□□□□ -1.33
PTPRD-204ENST00000397606 NKX6-2Q9C056 277 aaPredicted RBP6.75□□□□□ -1.33
PTPRD-204ENST00000397606 SMCO4Q9NRQ5 59 aa6.75□□□□□ -1.33
PTPRD-204ENST00000397606 VAX2Q9UIW0 290 aa6.75□□□□□ -1.33
PTPRD-204ENST00000397606 GAB2Q9UQC2 676 aa6.75□□□□□ -1.33
PTPRD-204ENST00000397606 C11orf94C9JXX5 98 aa6.75□□□□□ -1.33
PTPRD-204ENST00000397606 IGHV3-48P01763 117 aa6.75□□□□□ -1.33
PTPRD-204ENST00000397606 PRR27Q6MZM9 219 aa6.75□□□□□ -1.33
PTPRD-204ENST00000397606 ZNF429Q86V71 674 aa6.75□□□□□ -1.33
PTPRD-204ENST00000397606 OR4D5Q8NGN0 318 aa6.75□□□□□ -1.33
PTPRD-204ENST00000397606 C10orf105Q8TEF2 133 aa6.75□□□□□ -1.33
PTPRD-204ENST00000397606 WDR61Q9GZS3 305 aaKnown RBP6.75□□□□□ -1.33
PTPRD-204ENST00000397606 BRCA2P51587 3418 aa6.75□□□□□ -1.33
PTPRD-204ENST00000397606 CREBBPQ92793 2442 aa6.75□□□□□ -1.33
PTPRD-204ENST00000397606 TEX50A0A1B0GTY4 177 aa6.75□□□□□ -1.33
PTPRD-204ENST00000397606 FOXI3A8MTJ6 420 aaPredicted RBP6.75□□□□□ -1.33
PTPRD-204ENST00000397606 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP6.75□□□□□ -1.33
PTPRD-204ENST00000397606 NPPCP23582 126 aa6.75□□□□□ -1.33
PTPRD-204ENST00000397606 NMSQ5H8A3 153 aa6.75□□□□□ -1.33
PTPRD-204ENST00000397606 LAMTOR1Q6IAA8 161 aa6.75□□□□□ -1.33
PTPRD-204ENST00000397606 C22orf34Q6ZV56 151 aa6.75□□□□□ -1.33
PTPRD-204ENST00000397606 TVP23CQ96ET8 276 aa6.75□□□□□ -1.33
PTPRD-204ENST00000397606 C22orf46C9J442 243 aa6.75□□□□□ -1.33
PTPRD-204ENST00000397606 RPL7P18124 248 aaKnown RBP6.75□□□□□ -1.33
PTPRD-204ENST00000397606 DLX6P56179 175 aa6.75□□□□□ -1.33
PTPRD-204ENST00000397606 CR1LQ2VPA4 569 aa6.75□□□□□ -1.33
PTPRD-204ENST00000397606 TMEM219Q86XT9 240 aa6.75□□□□□ -1.33
PTPRD-204ENST00000397606 OR51G1Q8NGK1 321 aa6.75□□□□□ -1.33
PTPRD-204ENST00000397606 IGKV1-5P01602 117 aa6.74□□□□□ -1.33
PTPRD-204ENST00000397606 FCGR2BP31994 310 aaPredicted RBP6.74□□□□□ -1.33
PTPRD-204ENST00000397606 GNG4P50150 75 aa6.74□□□□□ -1.33
PTPRD-204ENST00000397606 OR5I1Q13606 314 aa6.74□□□□□ -1.33
PTPRD-204ENST00000397606 RBPMS2Q6ZRY4 209 aaKnown RBP6.74□□□□□ -1.33
PTPRD-204ENST00000397606 IL4P05112 153 aa6.74□□□□□ -1.33
PTPRD-204ENST00000397606 SFTA3P0C7M3 94 aa6.74□□□□□ -1.33
PTPRD-204ENST00000397606 HIST1H1EP10412 219 aaKnown RBP6.74□□□□□ -1.33
PTPRD-204ENST00000397606 CYP2G1PQ6ZSU1 146 aa6.74□□□□□ -1.33
PTPRD-204ENST00000397606 OR5AU1Q8NGC0 362 aa6.74□□□□□ -1.33
PTPRD-204ENST00000397606 SIGLEC9Q9Y336 463 aa6.74□□□□□ -1.33
PTPRD-204ENST00000397606 KMT2EQ8IZD2 1858 aa6.74□□□□□ -1.33
PTPRD-204ENST00000397606 TRAV41A0A0B4J266 112 aa6.74□□□□□ -1.33
PTPRD-204ENST00000397606 IGHV4-61A0A0C4DH41 118 aa6.74□□□□□ -1.33
PTPRD-204ENST00000397606 C8orf88P0DMB2 117 aa6.74□□□□□ -1.33
PTPRD-204ENST00000397606 TMEM144Q7Z5S9 345 aa6.74□□□□□ -1.33
PTPRD-204ENST00000397606 LHFPL5Q8TAF8 219 aa6.74□□□□□ -1.33
PTPRD-204ENST00000397606 TMEM204Q9BSN7 226 aa6.74□□□□□ -1.33
PTPRD-204ENST00000397606 MRPL32Q9BYC8 188 aaKnown RBP6.74□□□□□ -1.33
PTPRD-204ENST00000397606 IGHV4-30-2A0A087WSY4 118 aa6.74□□□□□ -1.33
PTPRD-204ENST00000397606 PDE6DO43924 150 aa6.74□□□□□ -1.33
PTPRD-204ENST00000397606 PAGE4O60829 102 aa6.74□□□□□ -1.33
PTPRD-204ENST00000397606 VENTXO95231 258 aa6.74□□□□□ -1.33
PTPRD-204ENST00000397606 PF4P02776 101 aa6.74□□□□□ -1.33
PTPRD-204ENST00000397606 TMEM241Q24JQ0 296 aa6.74□□□□□ -1.33
PTPRD-204ENST00000397606 ZNF833PQ6ZTB9 187 aa6.74□□□□□ -1.33
PTPRD-204ENST00000397606 C8orf31Q8N9H6 132 aa6.74□□□□□ -1.33
PTPRD-204ENST00000397606 TXNDC17Q9BRA2 123 aa6.74□□□□□ -1.33
PTPRD-204ENST00000397606 ZNF331Q9NQX6 463 aaPredicted RBP6.74□□□□□ -1.33
PTPRD-204ENST00000397606 RPS10P46783 165 aaKnown RBP6.73□□□□□ -1.33
PTPRD-204ENST00000397606 KIAA0141Q14154 515 aaPredicted RBP6.73□□□□□ -1.33
PTPRD-204ENST00000397606 OR1P1Q8NH06 330 aa6.73□□□□□ -1.33
PTPRD-204ENST00000397606 SH2D7A6NKC9 451 aaPredicted RBP6.73□□□□□ -1.33
PTPRD-204ENST00000397606 RGS13O14921 159 aa6.73□□□□□ -1.33
PTPRD-204ENST00000397606 PPP1R2P9O14990 202 aa6.73□□□□□ -1.33
PTPRD-204ENST00000397606 S100A4P26447 101 aaKnown RBP6.73□□□□□ -1.33
PTPRD-204ENST00000397606 GPR183P32249 361 aa6.73□□□□□ -1.33
PTPRD-204ENST00000397606 ERVFC1-1P60608 527 aa6.73□□□□□ -1.33
PTPRD-204ENST00000397606 RHOGP84095 191 aa6.73□□□□□ -1.33
PTPRD-204ENST00000397606 AANATQ16613 207 aa6.73□□□□□ -1.33
PTPRD-204ENST00000397606 LHFPL4Q7Z7J7 247 aa6.73□□□□□ -1.33
PTPRD-204ENST00000397606 NPCDR1Q9BY65 106 aa6.73□□□□□ -1.33
PTPRD-204ENST00000397606 PRR14LQ5THK1 2151 aa6.73□□□□□ -1.33
PTPRD-204ENST00000397606 TRAV14DV4A0A0A6YYC5 116 aa6.73□□□□□ -1.33
PTPRD-204ENST00000397606 WIPF3A6NGB9 483 aa6.73□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 67 ms