RNA–Protein interactions for RNA: ENST00000397443.6

CPNE1-204, Transcript of copine 1, humanhuman

APPRIS P1 TSL 5

Gene CPNE1, Length 1,928 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-204ENST00000397443 SNCAP37840 140 aa16.76■□□□□ 0.27
CPNE1-204ENST00000397443 TMUB2Q71RG4 321 aa16.76■□□□□ 0.27
CPNE1-204ENST00000397443 SLC24A4Q8NFF2 622 aa16.76■□□□□ 0.27
CPNE1-204ENST00000397443 SLC25A31Q9H0C2 315 aa16.76■□□□□ 0.27
CPNE1-204ENST00000397443 ERHP84090 104 aaKnown RBP16.76■□□□□ 0.27
CPNE1-204ENST00000397443 OR2F1Q13607 317 aa16.76■□□□□ 0.27
CPNE1-204ENST00000397443 C15orf62A8K5M9 175 aa16.75■□□□□ 0.27
CPNE1-204ENST00000397443 ATP6V0E1O15342 81 aa16.75■□□□□ 0.27
CPNE1-204ENST00000397443 Q6ZS46 218 aa16.75■□□□□ 0.27
CPNE1-204ENST00000397443 STX12Q86Y82 276 aa16.75■□□□□ 0.27
CPNE1-204ENST00000397443 TMEM170AQ8WVE7 144 aa16.75■□□□□ 0.27
CPNE1-204ENST00000397443 OR8U8P0C7N1 319 aa16.74■□□□□ 0.27
CPNE1-204ENST00000397443 NPY1RP25929 384 aa16.74■□□□□ 0.27
CPNE1-204ENST00000397443 CLINT1Q14677 625 aa16.74■□□□□ 0.27
CPNE1-204ENST00000397443 KCNRGQ8N5I3 272 aa16.74■□□□□ 0.27
CPNE1-204ENST00000397443 LFNGQ8NES3 379 aa16.74■□□□□ 0.27
CPNE1-204ENST00000397443 LINC00527Q9UJ94 153 aa16.74■□□□□ 0.27
CPNE1-204ENST00000397443 U3KQ87 197 aa16.74■□□□□ 0.27
CPNE1-204ENST00000397443 FN1P02751 2386 aaKnown RBP16.74■□□□□ 0.27
CPNE1-204ENST00000397443 MAST4O15021 2626 aa16.74■□□□□ 0.27
CPNE1-204ENST00000397443 M0QZK8 103 aa16.74■□□□□ 0.27
CPNE1-204ENST00000397443 IFNA4P05014 189 aa16.74■□□□□ 0.27
CPNE1-204ENST00000397443 S100A11P31949 105 aa16.74■□□□□ 0.27
CPNE1-204ENST00000397443 ARL16Q0P5N6 197 aa16.74■□□□□ 0.27
CPNE1-204ENST00000397443 ZNF345Q14585 488 aa16.74■□□□□ 0.27
CPNE1-204ENST00000397443 ECSCRQ19T08 205 aa16.74■□□□□ 0.27
CPNE1-204ENST00000397443 TMEM14EPQ6UXP3 125 aa16.74■□□□□ 0.27
CPNE1-204ENST00000397443 C16orf82Q7Z2V1 217 aa16.74■□□□□ 0.27
CPNE1-204ENST00000397443 A0A0D9SG52 128 aa16.73■□□□□ 0.27
CPNE1-204ENST00000397443 EGR2P11161 476 aaPredicted RBP16.73■□□□□ 0.27
CPNE1-204ENST00000397443 HTR2BP41595 481 aa16.73■□□□□ 0.27
CPNE1-204ENST00000397443 SULT1A1P50225 295 aa16.73■□□□□ 0.27
CPNE1-204ENST00000397443 RPP30P78346 268 aaKnown RBP16.73■□□□□ 0.27
CPNE1-204ENST00000397443 FBXL17Q9UF56 701 aa16.73■□□□□ 0.27
CPNE1-204ENST00000397443 DNAJC9-AS1A6NH13 148 aa16.72■□□□□ 0.27
CPNE1-204ENST00000397443 RNASE2P10153 161 aaKnown RBP16.72■□□□□ 0.27
CPNE1-204ENST00000397443 SCGB2A2Q13296 93 aa16.72■□□□□ 0.27
CPNE1-204ENST00000397443 HAPLN4Q86UW8 402 aa16.72■□□□□ 0.27
CPNE1-204ENST00000397443 OR5C1Q8NGR4 320 aa16.72■□□□□ 0.27
CPNE1-204ENST00000397443 P2RX4Q99571 388 aa16.72■□□□□ 0.27
CPNE1-204ENST00000397443 TUSC1Q2TAM9 212 aa16.72■□□□□ 0.27
CPNE1-204ENST00000397443 ASPHD1Q5U4P2 390 aa16.72■□□□□ 0.27
CPNE1-204ENST00000397443 ETV3LQ6ZN32 361 aa16.72■□□□□ 0.27
CPNE1-204ENST00000397443 MRPL41Q8IXM3 137 aaKnown RBP16.72■□□□□ 0.27
CPNE1-204ENST00000397443 ESM1Q9NQ30 184 aa16.72■□□□□ 0.27
CPNE1-204ENST00000397443 KANTRA0A1W2PQU2 76 aa16.71■□□□□ 0.27
CPNE1-204ENST00000397443 LY86O95711 162 aa16.71■□□□□ 0.27
CPNE1-204ENST00000397443 PRH1P02810 166 aa16.71■□□□□ 0.27
CPNE1-204ENST00000397443 RAB11AP62491 216 aa16.71■□□□□ 0.27
CPNE1-204ENST00000397443 OPCMLQ14982 345 aa16.71■□□□□ 0.27
CPNE1-204ENST00000397443 OR5T1Q8NG75 326 aa16.71■□□□□ 0.27
CPNE1-204ENST00000397443 NF1P21359 2839 aa16.71■□□□□ 0.27
CPNE1-204ENST00000397443 G3V318 75 aa16.7■□□□□ 0.26
CPNE1-204ENST00000397443 DEFA4P12838 97 aa16.7■□□□□ 0.26
CPNE1-204ENST00000397443 UNQ5815/PRO19632Q6UWF5 114 aa16.7■□□□□ 0.26
CPNE1-204ENST00000397443 SLC35E3Q7Z769 313 aa16.7■□□□□ 0.26
CPNE1-204ENST00000397443 LILRB2Q8N423 598 aa16.7■□□□□ 0.26
CPNE1-204ENST00000397443 TEP1Q99973 2627 aaKnown RBP16.7■□□□□ 0.26
CPNE1-204ENST00000397443 INS-IGF2F8WCM5 200 aa16.7■□□□□ 0.26
CPNE1-204ENST00000397443 BAXQ07812 192 aa16.7■□□□□ 0.26
CPNE1-204ENST00000397443 TMEM95Q3KNT9 176 aa16.7■□□□□ 0.26
CPNE1-204ENST00000397443 OR10P1Q8NGE3 313 aa16.7■□□□□ 0.26
CPNE1-204ENST00000397443 OR1S2Q8NGQ3 325 aa16.7■□□□□ 0.26
CPNE1-204ENST00000397443 SGMS2Q8NHU3 365 aa16.7■□□□□ 0.26
CPNE1-204ENST00000397443 TAF15Q92804 592 aaKnown RBP eCLIP16.7■□□□□ 0.261e-6■□□□□ 9.7
CPNE1-204ENST00000397443 ARPC5LQ9BPX5 153 aa16.7■□□□□ 0.26
CPNE1-204ENST00000397443 WFDC1Q9HC57 220 aa16.7■□□□□ 0.26
CPNE1-204ENST00000397443 BCL2L11O43521 198 aa16.69■□□□□ 0.26
CPNE1-204ENST00000397443 SLC38A11Q08AI6 406 aa16.69■□□□□ 0.26
CPNE1-204ENST00000397443 BSXQ3C1V8 233 aa16.69■□□□□ 0.26
CPNE1-204ENST00000397443 PINX1Q96BK5 328 aaKnown RBP16.69■□□□□ 0.26
CPNE1-204ENST00000397443 NOL4LQ96MY1 436 aaPredicted RBP16.69■□□□□ 0.26
CPNE1-204ENST00000397443 ZNF471Q9BX82 626 aaPredicted RBP16.69■□□□□ 0.26
CPNE1-204ENST00000397443 WNT10AQ9GZT5 417 aa16.69■□□□□ 0.26
CPNE1-204ENST00000397443 PMS2P5A8MQ11 134 aa16.68■□□□□ 0.26
CPNE1-204ENST00000397443 MFAP2P55001 183 aa16.68■□□□□ 0.26
CPNE1-204ENST00000397443 HBG1P69891 147 aa16.68■□□□□ 0.26
CPNE1-204ENST00000397443 HBG2P69892 147 aa16.68■□□□□ 0.26
CPNE1-204ENST00000397443 C2orf83Q53S99 150 aa16.68■□□□□ 0.26
CPNE1-204ENST00000397443 ARSJQ5FYB0 599 aaPredicted RBP16.68■□□□□ 0.26
CPNE1-204ENST00000397443 MISP3Q96FF7 219 aa16.68■□□□□ 0.26
CPNE1-204ENST00000397443 IGHG2P01859 326 aa16.68■□□□□ 0.26
CPNE1-204ENST00000397443 SUB1P53999 127 aaKnown RBP eCLIP16.68■□□□□ 0.261e-12■■■■□ 22.8
CPNE1-204ENST00000397443 SLC25A24Q6NUK1 477 aa16.68■□□□□ 0.26
CPNE1-204ENST00000397443 HSD17B13Q7Z5P4 300 aaPredicted RBP16.68■□□□□ 0.26
CPNE1-204ENST00000397443 ZNF418Q8TF45 676 aaPredicted RBP16.68■□□□□ 0.26
CPNE1-204ENST00000397443 SRSF8Q9BRL6 282 aaKnown RBP16.68■□□□□ 0.26
CPNE1-204ENST00000397443 IGHV3-21A0A0B4J1V1 117 aa16.67■□□□□ 0.26
CPNE1-204ENST00000397443 TRIM77I1YAP6 450 aa16.67■□□□□ 0.26
CPNE1-204ENST00000397443 IGHV3-48P01763 117 aa16.67■□□□□ 0.26
CPNE1-204ENST00000397443 CTRB1P17538 263 aa16.67■□□□□ 0.26
CPNE1-204ENST00000397443 MLANAQ16655 118 aa16.67■□□□□ 0.26
CPNE1-204ENST00000397443 RPL7L1Q6DKI1 246 aaKnown RBP16.67■□□□□ 0.26
CPNE1-204ENST00000397443 CTRB2Q6GPI1 263 aa16.67■□□□□ 0.26
CPNE1-204ENST00000397443 TMEM86BQ8N661 226 aa16.67■□□□□ 0.26
CPNE1-204ENST00000397443 NPFFR1Q9GZQ6 430 aa16.67■□□□□ 0.26
CPNE1-204ENST00000397443 F11RQ9Y624 299 aaKnown RBP16.67■□□□□ 0.26
CPNE1-204ENST00000397443 SMCO3A2RU48 225 aa16.66■□□□□ 0.26
CPNE1-204ENST00000397443 FBXO24O75426 580 aa16.66■□□□□ 0.26
CPNE1-204ENST00000397443 C4BPBP20851 252 aa16.66■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms