RNA–Protein interactions for RNA: ENST00000397117.5

SEC13-209, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 5 BASIC

Gene SEC13, Length 1,603 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-209ENST00000397117 OR2F1Q13607 317 aa10.5□□□□□ -0.73
SEC13-209ENST00000397117 ZNF345Q14585 488 aa10.5□□□□□ -0.73
SEC13-209ENST00000397117 OR2C3Q8N628 320 aa10.5□□□□□ -0.73
SEC13-209ENST00000397117 PIFOQ8TCI5 191 aa10.5□□□□□ -0.73
SEC13-209ENST00000397117 RBM14Q96PK6 669 aaKnown RBP10.5□□□□□ -0.73
SEC13-209ENST00000397117 SLC25A33Q9BSK2 321 aa10.5□□□□□ -0.73
SEC13-209ENST00000397117 SLC25A31Q9H0C2 315 aa10.5□□□□□ -0.73
SEC13-209ENST00000397117 LYRM2Q9NU23 88 aaPredicted RBP10.5□□□□□ -0.73
SEC13-209ENST00000397117 A0A0D9SG52 128 aa10.49□□□□□ -0.73
SEC13-209ENST00000397117 RNF222A6NCQ9 220 aa10.49□□□□□ -0.73
SEC13-209ENST00000397117 H3BP45 60 aa10.49□□□□□ -0.73
SEC13-209ENST00000397117 FCN1O00602 326 aa10.49□□□□□ -0.73
SEC13-209ENST00000397117 TSC22D2O75157 780 aa10.49□□□□□ -0.73
SEC13-209ENST00000397117 TMEM50AO95807 157 aa10.49□□□□□ -0.73
SEC13-209ENST00000397117 CA2P00918 260 aa10.49□□□□□ -0.73
SEC13-209ENST00000397117 RPL27AP46776 148 aaKnown RBP10.49□□□□□ -0.73
SEC13-209ENST00000397117 LY6EQ16553 131 aa10.49□□□□□ -0.73
SEC13-209ENST00000397117 SPANXN5Q5MJ07 72 aa10.49□□□□□ -0.73
SEC13-209ENST00000397117 Q6YL49 198 aa10.49□□□□□ -0.73
SEC13-209ENST00000397117 TMEM219Q86XT9 240 aa10.49□□□□□ -0.73
SEC13-209ENST00000397117 MRPL41Q8IXM3 137 aaKnown RBP10.49□□□□□ -0.73
SEC13-209ENST00000397117 AQP10Q96PS8 301 aa10.49□□□□□ -0.73
SEC13-209ENST00000397117 C11orf1Q9H5F2 150 aa10.49□□□□□ -0.73
SEC13-209ENST00000397117 NDUFA4L2Q9NRX3 87 aa10.49□□□□□ -0.73
SEC13-209ENST00000397117 MOB4Q9Y3A3 225 aa10.49□□□□□ -0.73
SEC13-209ENST00000397117 A0A1W2PN81 502 aa10.48□□□□□ -0.73
SEC13-209ENST00000397117 CLPSL1A2RUU4 121 aa10.48□□□□□ -0.73
SEC13-209ENST00000397117 FAM24AA6NFZ4 105 aa10.48□□□□□ -0.73
SEC13-209ENST00000397117 M0QZ24 198 aa10.48□□□□□ -0.73
SEC13-209ENST00000397117 S100A11P31949 105 aa10.48□□□□□ -0.73
SEC13-209ENST00000397117 CHRNA7P36544 502 aa10.48□□□□□ -0.73
SEC13-209ENST00000397117 PAX9P55771 341 aa10.48□□□□□ -0.73
SEC13-209ENST00000397117 MRGPRG-AS1Q2M3A8 158 aa10.48□□□□□ -0.73
SEC13-209ENST00000397117 C10orf55Q5SWW7 151 aa10.48□□□□□ -0.73
SEC13-209ENST00000397117 TMUB2Q71RG4 321 aa10.48□□□□□ -0.73
SEC13-209ENST00000397117 STX12Q86Y82 276 aa10.48□□□□□ -0.73
SEC13-209ENST00000397117 Q8N9W7 124 aa10.48□□□□□ -0.73
SEC13-209ENST00000397117 OR5R1Q8NH85 324 aa10.48□□□□□ -0.73
SEC13-209ENST00000397117 ARL6Q9H0F7 186 aa10.48□□□□□ -0.73
SEC13-209ENST00000397117 STRAPQ9Y3F4 350 aaKnown RBP10.48□□□□□ -0.73
SEC13-209ENST00000397117 TNCP24821 2201 aa10.48□□□□□ -0.73
SEC13-209ENST00000397117 A6NDX4 124 aa10.47□□□□□ -0.73
SEC13-209ENST00000397117 MSGN1A6NI15 193 aa10.47□□□□□ -0.73
SEC13-209ENST00000397117 IFNA10P01566 189 aa10.47□□□□□ -0.73
SEC13-209ENST00000397117 CRYBA1P05813 215 aa10.47□□□□□ -0.73
SEC13-209ENST00000397117 VDAC2P45880 294 aaPredicted RBP10.47□□□□□ -0.73
SEC13-209ENST00000397117 IER3P46695 156 aa10.47□□□□□ -0.73
SEC13-209ENST00000397117 ERHP84090 104 aaKnown RBP10.47□□□□□ -0.73
SEC13-209ENST00000397117 OPCMLQ14982 345 aa10.47□□□□□ -0.73
SEC13-209ENST00000397117 KCNRGQ8N5I3 272 aa10.47□□□□□ -0.73
SEC13-209ENST00000397117 U3KQ87 197 aa10.47□□□□□ -0.73
SEC13-209ENST00000397117 KANTRA0A1W2PQU2 76 aa10.47□□□□□ -0.73
SEC13-209ENST00000397117 M0QZK8 103 aa10.47□□□□□ -0.73
SEC13-209ENST00000397117 FGF16O43320 207 aa10.47□□□□□ -0.73
SEC13-209ENST00000397117 IGHV4-59P01825 116 aa10.47□□□□□ -0.73
SEC13-209ENST00000397117 SNCAP37840 140 aa10.47□□□□□ -0.73
SEC13-209ENST00000397117 EWSR1Q01844 656 aaKnown RBP eCLIP10.47□□□□□ -0.73
SEC13-209ENST00000397117 FXYD3Q14802 87 aa10.47□□□□□ -0.73
SEC13-209ENST00000397117 ZNF562Q6V9R5 426 aa10.47□□□□□ -0.73
SEC13-209ENST00000397117 C16orf82Q7Z2V1 217 aa10.47□□□□□ -0.73
SEC13-209ENST00000397117 TMEM86BQ8N661 226 aa10.47□□□□□ -0.73
SEC13-209ENST00000397117 TMEM252Q8N6L7 170 aa10.47□□□□□ -0.73
SEC13-209ENST00000397117 OR10W1Q8NGF6 305 aa10.47□□□□□ -0.73
SEC13-209ENST00000397117 ABHD5Q8WTS1 349 aa10.47□□□□□ -0.73
SEC13-209ENST00000397117 SSMEM1Q8WWF3 244 aa10.47□□□□□ -0.73
SEC13-209ENST00000397117 SRSF12Q8WXF0 261 aaKnown RBP10.47□□□□□ -0.73
SEC13-209ENST00000397117 TNFRSF19Q9NS68 423 aa10.47□□□□□ -0.73
SEC13-209ENST00000397117 IGSF23A1L1A6 192 aa10.46□□□□□ -0.74
SEC13-209ENST00000397117 E7EUB6 86 aa10.46□□□□□ -0.74
SEC13-209ENST00000397117 CST7O76096 145 aa10.46□□□□□ -0.74
SEC13-209ENST00000397117 HLA-DRB1P01911 266 aa10.46□□□□□ -0.74
SEC13-209ENST00000397117 METTL15P1P0C7V9 234 aa10.46□□□□□ -0.74
SEC13-209ENST00000397117 HTR2BP41595 481 aa10.46□□□□□ -0.74
SEC13-209ENST00000397117 SULT1A1P50225 295 aa10.46□□□□□ -0.74
SEC13-209ENST00000397117 CX3CL1P78423 397 aa10.46□□□□□ -0.74
SEC13-209ENST00000397117 BAXQ07812 192 aa10.46□□□□□ -0.74
SEC13-209ENST00000397117 TMEM267Q0VDI3 215 aaPredicted RBP10.46□□□□□ -0.74
SEC13-209ENST00000397117 C5orf56Q8N8D9 126 aa10.46□□□□□ -0.74
SEC13-209ENST00000397117 OR8U8P0C7N1 319 aa10.45□□□□□ -0.74
SEC13-209ENST00000397117 OR13C7P0DN81 318 aa10.45□□□□□ -0.74
SEC13-209ENST00000397117 RAB11AP62491 216 aa10.45□□□□□ -0.74
SEC13-209ENST00000397117 NHLH2Q02577 135 aa10.45□□□□□ -0.74
SEC13-209ENST00000397117 HSD17B13Q7Z5P4 300 aaPredicted RBP10.45□□□□□ -0.74
SEC13-209ENST00000397117 TMEM217Q8N7C4 229 aa10.45□□□□□ -0.74
SEC13-209ENST00000397117 SLC24A4Q8NFF2 622 aa10.45□□□□□ -0.74
SEC13-209ENST00000397117 ARPC1AQ92747 370 aa10.45□□□□□ -0.74
SEC13-209ENST00000397117 OR4C12Q96R67 309 aa10.45□□□□□ -0.74
SEC13-209ENST00000397117 ARPC5LQ9BPX5 153 aa10.45□□□□□ -0.74
SEC13-209ENST00000397117 SRSF8Q9BRL6 282 aaKnown RBP10.45□□□□□ -0.74
SEC13-209ENST00000397117 CGB1A6NKQ9 187 aa10.44□□□□□ -0.74
SEC13-209ENST00000397117 INS-IGF2F8WCM5 200 aa10.44□□□□□ -0.74
SEC13-209ENST00000397117 TAAR5O14804 337 aa10.44□□□□□ -0.74
SEC13-209ENST00000397117 BCL2L11O43521 198 aa10.44□□□□□ -0.74
SEC13-209ENST00000397117 SCAF4O95104 1147 aaKnown RBP10.44□□□□□ -0.74
SEC13-209ENST00000397117 NPY1RP25929 384 aa10.44□□□□□ -0.74
SEC13-209ENST00000397117 SUB1P53999 127 aaKnown RBP eCLIP10.44□□□□□ -0.741e-7■■■■■ 110.7
SEC13-209ENST00000397117 ATP5IP56385 69 aaPredicted RBP10.44□□□□□ -0.74
SEC13-209ENST00000397117 RPL15P61313 204 aaKnown RBP10.44□□□□□ -0.74
SEC13-209ENST00000397117 HBG1P69891 147 aa10.44□□□□□ -0.74
SEC13-209ENST00000397117 HBG2P69892 147 aa10.44□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 53.4 ms