RNA–Protein interactions for RNA: ENST00000396653.2

AP1S3-202, Transcript of adaptor related protein complex 1 subunit sigma 3, humanhuman

TSL 4 BASIC

Gene AP1S3, Length 589 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S3-202ENST00000396653 HOXA1P49639 335 aaPredicted RBP12.78□□□□□ -0.36
AP1S3-202ENST00000396653 ERHP84090 104 aaKnown RBP12.78□□□□□ -0.36
AP1S3-202ENST00000396653 TNFRSF9Q07011 255 aa12.78□□□□□ -0.36
AP1S3-202ENST00000396653 KIAA0141Q14154 515 aaPredicted RBP12.78□□□□□ -0.36
AP1S3-202ENST00000396653 OXA1LQ15070 435 aa12.78□□□□□ -0.36
AP1S3-202ENST00000396653 C2orf68Q2NKX9 166 aa12.78□□□□□ -0.36
AP1S3-202ENST00000396653 LCNL1Q6ZST4 164 aa12.78□□□□□ -0.36
AP1S3-202ENST00000396653 FAM223AQ8IWN6 122 aa12.78□□□□□ -0.36
AP1S3-202ENST00000396653 ENY2Q9NPA8 101 aa12.78□□□□□ -0.36
AP1S3-202ENST00000396653 F11RQ9Y624 299 aaKnown RBP12.78□□□□□ -0.36
AP1S3-202ENST00000396653 IGLV11-55A0A075B6I3 123 aa12.77□□□□□ -0.37
AP1S3-202ENST00000396653 A0A0G2JLM5 398 aa12.77□□□□□ -0.37
AP1S3-202ENST00000396653 REG1AP05451 166 aa12.77□□□□□ -0.37
AP1S3-202ENST00000396653 C4orf3Q8WVX3 66 aa12.77□□□□□ -0.37
AP1S3-202ENST00000396653 USMG5Q96IX5 58 aa12.77□□□□□ -0.37
AP1S3-202ENST00000396653 MS4A10Q96PG2 267 aa12.77□□□□□ -0.37
AP1S3-202ENST00000396653 FANCD2OSQ96PS1 177 aa12.77□□□□□ -0.37
AP1S3-202ENST00000396653 CEBPZOSA8MTT3 80 aa12.76□□□□□ -0.37
AP1S3-202ENST00000396653 MPTX1A8MV57 137 aa12.76□□□□□ -0.37
AP1S3-202ENST00000396653 M0QZ24 198 aa12.76□□□□□ -0.37
AP1S3-202ENST00000396653 MED6O75586 246 aa12.76□□□□□ -0.37
AP1S3-202ENST00000396653 DEFA4P12838 97 aa12.76□□□□□ -0.37
AP1S3-202ENST00000396653 RUNX1Q01196 453 aa12.76□□□□□ -0.37
AP1S3-202ENST00000396653 TATDN3Q17R31 274 aa12.76□□□□□ -0.37
AP1S3-202ENST00000396653 SPINK9Q5DT21 86 aa12.76□□□□□ -0.37
AP1S3-202ENST00000396653 NECAP1Q8NC96 275 aa12.76□□□□□ -0.37
AP1S3-202ENST00000396653 OR1P1Q8NH06 330 aa12.76□□□□□ -0.37
AP1S3-202ENST00000396653 THYN1Q9P016 225 aa12.76□□□□□ -0.37
AP1S3-202ENST00000396653 PRH1P02810 166 aa12.75□□□□□ -0.37
AP1S3-202ENST00000396653 RHOGP84095 191 aa12.75□□□□□ -0.37
AP1S3-202ENST00000396653 IAH1Q2TAA2 248 aaPredicted RBP12.75□□□□□ -0.37
AP1S3-202ENST00000396653 BSXQ3C1V8 233 aa12.75□□□□□ -0.37
AP1S3-202ENST00000396653 NSUN5P1Q3KNT7 163 aa12.75□□□□□ -0.37
AP1S3-202ENST00000396653 FAM209BQ5JX69 171 aa12.75□□□□□ -0.37
AP1S3-202ENST00000396653 HIST2H2BDQ6DRA6 164 aa12.75□□□□□ -0.37
AP1S3-202ENST00000396653 C19orf35Q6ZS72 473 aa12.75□□□□□ -0.37
AP1S3-202ENST00000396653 UXS1Q8NBZ7 420 aa12.75□□□□□ -0.37
AP1S3-202ENST00000396653 KLHL30-AS1Q8NEE0 82 aa12.75□□□□□ -0.37
AP1S3-202ENST00000396653 OR4D5Q8NGN0 318 aa12.75□□□□□ -0.37
AP1S3-202ENST00000396653 P2RX4Q99571 388 aa12.75□□□□□ -0.37
AP1S3-202ENST00000396653 C13orf42A0A1B0GVH6 325 aa12.74□□□□□ -0.37
AP1S3-202ENST00000396653 NUDT19A8MXV4 375 aa12.74□□□□□ -0.37
AP1S3-202ENST00000396653 OR2J3O76001 311 aa12.74□□□□□ -0.37
AP1S3-202ENST00000396653 NXPH3O95157 252 aa12.74□□□□□ -0.37
AP1S3-202ENST00000396653 LY86O95711 162 aa12.74□□□□□ -0.37
AP1S3-202ENST00000396653 LGALS1P09382 135 aaKnown RBP12.74□□□□□ -0.37
AP1S3-202ENST00000396653 SNCAP37840 140 aa12.74□□□□□ -0.37
AP1S3-202ENST00000396653 PVRIGQ6DKI7 326 aa12.74□□□□□ -0.37
AP1S3-202ENST00000396653 GSG1LQ6UXU4 331 aa12.74□□□□□ -0.37
AP1S3-202ENST00000396653 ZBTB8BQ8NAP8 495 aaPredicted RBP12.74□□□□□ -0.37
AP1S3-202ENST00000396653 OR4F17Q8NGA8 305 aa12.74□□□□□ -0.37
AP1S3-202ENST00000396653 DTD1Q8TEA8 209 aa12.74□□□□□ -0.37
AP1S3-202ENST00000396653 OR10C1Q96KK4 312 aa12.74□□□□□ -0.37
AP1S3-202ENST00000396653 OR4F4Q96R69 305 aa12.74□□□□□ -0.37
AP1S3-202ENST00000396653 HIPK2Q9H2X6 1198 aa12.74□□□□□ -0.37
AP1S3-202ENST00000396653 RBKSQ9H477 322 aa12.74□□□□□ -0.37
AP1S3-202ENST00000396653 GNB4Q9HAV0 340 aa12.74□□□□□ -0.37
AP1S3-202ENST00000396653 DMRT1Q9Y5R6 373 aa12.74□□□□□ -0.37
AP1S3-202ENST00000396653 A0A1W2PRX2 142 aa12.73□□□□□ -0.37
AP1S3-202ENST00000396653 I3L521 148 aa12.73□□□□□ -0.37
AP1S3-202ENST00000396653 CORTO00230 105 aa12.73□□□□□ -0.37
AP1S3-202ENST00000396653 CCSO14618 274 aa12.73□□□□□ -0.37
AP1S3-202ENST00000396653 RNASE2P10153 161 aaKnown RBP12.73□□□□□ -0.37
AP1S3-202ENST00000396653 HTR2BP41595 481 aa12.73□□□□□ -0.37
AP1S3-202ENST00000396653 NKX2-1P43699 371 aaPredicted RBP12.73□□□□□ -0.37
AP1S3-202ENST00000396653 SUB1P53999 127 aaKnown RBP eCLIP12.73□□□□□ -0.37
AP1S3-202ENST00000396653 MFAP2P55001 183 aa12.73□□□□□ -0.37
AP1S3-202ENST00000396653 ID3Q02535 119 aa12.73□□□□□ -0.37
AP1S3-202ENST00000396653 C18orf65Q6ZTR6 163 aa12.73□□□□□ -0.37
AP1S3-202ENST00000396653 C2orf50Q96LR7 162 aa12.73□□□□□ -0.37
AP1S3-202ENST00000396653 CIB3Q96Q77 187 aaPredicted RBP12.73□□□□□ -0.37
AP1S3-202ENST00000396653 HEYLQ9NQ87 328 aaPredicted RBP12.73□□□□□ -0.37
AP1S3-202ENST00000396653 FBXL7Q9UJT9 491 aa12.73□□□□□ -0.37
AP1S3-202ENST00000396653 ALG5Q9Y673 324 aa12.73□□□□□ -0.37
AP1S3-202ENST00000396653 C5orf51A6NDU8 294 aa12.72□□□□□ -0.37
AP1S3-202ENST00000396653 SYNGR2O43760 224 aa12.72□□□□□ -0.37
AP1S3-202ENST00000396653 ATP5IP56385 69 aaPredicted RBP12.72□□□□□ -0.37
AP1S3-202ENST00000396653 ATP5G2Q06055 141 aa12.72□□□□□ -0.37
AP1S3-202ENST00000396653 EXOSC2Q13868 293 aaKnown RBP12.72□□□□□ -0.37
AP1S3-202ENST00000396653 C15orf32Q32M92 178 aa12.72□□□□□ -0.37
AP1S3-202ENST00000396653 C2orf83Q53S99 150 aa12.72□□□□□ -0.37
AP1S3-202ENST00000396653 SLC25A24Q6NUK1 477 aa12.72□□□□□ -0.37
AP1S3-202ENST00000396653 ZNF343Q6P1L6 599 aa12.72□□□□□ -0.37
AP1S3-202ENST00000396653 C8orf86Q6ZUL3 223 aa12.72□□□□□ -0.37
AP1S3-202ENST00000396653 NOXA1Q86UR1 476 aa12.72□□□□□ -0.37
AP1S3-202ENST00000396653 SLC24A4Q8NFF2 622 aa12.72□□□□□ -0.37
AP1S3-202ENST00000396653 CXorf58Q96LI9 332 aa12.72□□□□□ -0.37
AP1S3-202ENST00000396653 U3KQ87 197 aa12.72□□□□□ -0.37
AP1S3-202ENST00000396653 FAM25EA8MYX2 175 aa12.71□□□□□ -0.37
AP1S3-202ENST00000396653 SSNA1O43805 119 aa12.71□□□□□ -0.37
AP1S3-202ENST00000396653 NDUFB8O95169 186 aa12.71□□□□□ -0.37
AP1S3-202ENST00000396653 DEFA5Q01523 94 aa12.71□□□□□ -0.37
AP1S3-202ENST00000396653 VN1R17PQ8TDU5 208 aa12.71□□□□□ -0.37
AP1S3-202ENST00000396653 EEF1AKMT3Q96AZ1 226 aa12.71□□□□□ -0.37
AP1S3-202ENST00000396653 ATP6V0BQ99437 205 aa12.71□□□□□ -0.37
AP1S3-202ENST00000396653 WRBO00258 174 aa12.7□□□□□ -0.38
AP1S3-202ENST00000396653 GOSR2O14653 212 aa12.7□□□□□ -0.38
AP1S3-202ENST00000396653 TSPAN15O95858 294 aa12.7□□□□□ -0.38
AP1S3-202ENST00000396653 IGHV3-11P01762 117 aa12.7□□□□□ -0.38
AP1S3-202ENST00000396653 NPY1RP25929 384 aa12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 71.6 ms