RNA–Protein interactions for RNA: ENST00000396352.8

HOXA3-202, Transcript of homeobox A3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXA3, Length 3,263 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA3-202ENST00000396352 SRRM4A7MD48 611 aaKnown RBP12.83□□□□□ -0.36
HOXA3-202ENST00000396352 ZNF705FA8MVS1 300 aaPredicted RBP12.83□□□□□ -0.36
HOXA3-202ENST00000396352 ZNF705DP0CH99 300 aaPredicted RBP12.83□□□□□ -0.36
HOXA3-202ENST00000396352 ZNF705BP0CI00 300 aaPredicted RBP12.83□□□□□ -0.36
HOXA3-202ENST00000396352 RAB4AP20338 218 aa12.83□□□□□ -0.36
HOXA3-202ENST00000396352 GLRXP35754 106 aa12.83□□□□□ -0.36
HOXA3-202ENST00000396352 GNG4P50150 75 aa12.83□□□□□ -0.36
HOXA3-202ENST00000396352 OR8I2Q8N0Y5 310 aa12.83□□□□□ -0.36
HOXA3-202ENST00000396352 ST6GALNAC3Q8NDV1 305 aa12.83□□□□□ -0.36
HOXA3-202ENST00000396352 GAFA1Q96PS6 74 aa12.83□□□□□ -0.36
HOXA3-202ENST00000396352 TMEM167BQ9NRX6 74 aa12.83□□□□□ -0.36
HOXA3-202ENST00000396352 TNCP24821 2201 aa12.83□□□□□ -0.36
HOXA3-202ENST00000396352 HELTA6NFD8 242 aa12.82□□□□□ -0.36
HOXA3-202ENST00000396352 SNURFLB1AK76 121 aa12.82□□□□□ -0.36
HOXA3-202ENST00000396352 UPK2O00526 184 aa12.82□□□□□ -0.36
HOXA3-202ENST00000396352 TCAPO15273 167 aa12.82□□□□□ -0.36
HOXA3-202ENST00000396352 Q0VG73 95 aa12.82□□□□□ -0.36
HOXA3-202ENST00000396352 TDRG1Q3Y452 100 aa12.82□□□□□ -0.36
HOXA3-202ENST00000396352 ZNF474Q6S9Z5 364 aaPredicted RBP12.82□□□□□ -0.36
HOXA3-202ENST00000396352 TEX43Q6ZNM6 134 aa12.82□□□□□ -0.36
HOXA3-202ENST00000396352 ATG101Q9BSB4 218 aa12.82□□□□□ -0.36
HOXA3-202ENST00000396352 GCM1Q9NP62 436 aa12.82□□□□□ -0.36
HOXA3-202ENST00000396352 IL19Q9UHD0 177 aa12.82□□□□□ -0.36
HOXA3-202ENST00000396352 GGTLC3B5MD39 225 aa12.82□□□□□ -0.36
HOXA3-202ENST00000396352 CT45A6P0DMU7 189 aa12.82□□□□□ -0.36
HOXA3-202ENST00000396352 CT45A5P0DMU8 189 aa12.82□□□□□ -0.36
HOXA3-202ENST00000396352 CT45A7P0DMV0 189 aa12.82□□□□□ -0.36
HOXA3-202ENST00000396352 GATA2P23769 480 aaPredicted RBP12.82□□□□□ -0.36
HOXA3-202ENST00000396352 CDKN1AP38936 164 aa12.82□□□□□ -0.36
HOXA3-202ENST00000396352 PQLC2Q6ZP29 291 aa12.82□□□□□ -0.36
HOXA3-202ENST00000396352 GNB1LQ9BYB4 327 aa12.82□□□□□ -0.36
HOXA3-202ENST00000396352 LINC00574Q9H8X3 128 aa12.82□□□□□ -0.36
HOXA3-202ENST00000396352 ZNRD1Q9P1U0 126 aa12.82□□□□□ -0.36
HOXA3-202ENST00000396352 RANP62826 216 aaKnown RBP12.82□□□□□ -0.36
HOXA3-202ENST00000396352 TIMM23BQ5SRD1 257 aa12.82□□□□□ -0.36
HOXA3-202ENST00000396352 TOMM20LQ6UXN7 152 aa12.82□□□□□ -0.36
HOXA3-202ENST00000396352 DOLPP1Q86YN1 238 aa12.82□□□□□ -0.36
HOXA3-202ENST00000396352 SLC35E1Q96K37 410 aa12.82□□□□□ -0.36
HOXA3-202ENST00000396352 HSPB9Q9BQS6 159 aa12.82□□□□□ -0.36
HOXA3-202ENST00000396352 RNASE7Q9H1E1 156 aaKnown RBP12.82□□□□□ -0.36
HOXA3-202ENST00000396352 TRBV9A0A0B4J1U6 114 aa12.81□□□□□ -0.36
HOXA3-202ENST00000396352 TEX50A0A1B0GTY4 177 aa12.81□□□□□ -0.36
HOXA3-202ENST00000396352 TECRQ9NZ01 308 aaKnown RBP12.81□□□□□ -0.36
HOXA3-202ENST00000396352 SMG1Q96Q15 3661 aaKnown RBP12.81□□□□□ -0.36
HOXA3-202ENST00000396352 M0R143 59 aa12.81□□□□□ -0.36
HOXA3-202ENST00000396352 OR5G3P0C626 314 aa12.81□□□□□ -0.36
HOXA3-202ENST00000396352 RNF7Q9UBF6 113 aa12.81□□□□□ -0.36
HOXA3-202ENST00000396352 YLPM1P49750 1951 aaKnown RBP12.81□□□□□ -0.36
HOXA3-202ENST00000396352 COMPP49747 757 aaPredicted RBP12.8□□□□□ -0.36
HOXA3-202ENST00000396352 CX3CL1P78423 397 aa12.8□□□□□ -0.36
HOXA3-202ENST00000396352 C2orf83Q53S99 150 aa12.8□□□□□ -0.36
HOXA3-202ENST00000396352 SLC25A48Q6ZT89 311 aaKnown RBP12.8□□□□□ -0.36
HOXA3-202ENST00000396352 ASCL3Q9NQ33 180 aa12.8□□□□□ -0.36
HOXA3-202ENST00000396352 IGLV2-8P01709 118 aa12.8□□□□□ -0.36
HOXA3-202ENST00000396352 TDGF1P3P51864 188 aa12.8□□□□□ -0.36
HOXA3-202ENST00000396352 MLANAQ16655 118 aa12.8□□□□□ -0.36
HOXA3-202ENST00000396352 PNKDQ8N490 385 aa12.8□□□□□ -0.36
HOXA3-202ENST00000396352 FAM216BQ8N7L0 139 aa12.8□□□□□ -0.36
HOXA3-202ENST00000396352 BAGE3Q86Y29 109 aa12.8□□□□□ -0.36
HOXA3-202ENST00000396352 BAGE2Q86Y30 109 aa12.8□□□□□ -0.36
HOXA3-202ENST00000396352 SNRNP40Q96DI7 357 aaKnown RBP12.8□□□□□ -0.36
HOXA3-202ENST00000396352 CCL13Q99616 98 aa12.8□□□□□ -0.36
HOXA3-202ENST00000396352 C20orf144Q9BQM9 153 aa12.8□□□□□ -0.36
HOXA3-202ENST00000396352 GNB4Q9HAV0 340 aa12.8□□□□□ -0.36
HOXA3-202ENST00000396352 RNF114Q9Y508 228 aa12.8□□□□□ -0.36
HOXA3-202ENST00000396352 SVILO95425 2214 aa12.79□□□□□ -0.36
HOXA3-202ENST00000396352 OR7C2O60412 319 aa12.79□□□□□ -0.36
HOXA3-202ENST00000396352 RNASE2P10153 161 aaKnown RBP12.79□□□□□ -0.36
HOXA3-202ENST00000396352 FXYD3Q14802 87 aa12.79□□□□□ -0.36
HOXA3-202ENST00000396352 RPRMLQ8N4K4 120 aa12.79□□□□□ -0.36
HOXA3-202ENST00000396352 DEFB108BQ8NET1 73 aa12.79□□□□□ -0.36
HOXA3-202ENST00000396352 OR5AU1Q8NGC0 362 aa12.79□□□□□ -0.36
HOXA3-202ENST00000396352 OR9G1Q8NH87 305 aa12.79□□□□□ -0.36
HOXA3-202ENST00000396352 IGF2BP2-AS1Q96M15 143 aa12.79□□□□□ -0.36
HOXA3-202ENST00000396352 OSTCQ9NRP0 149 aa12.79□□□□□ -0.36
HOXA3-202ENST00000396352 SLC35D1Q9NTN3 355 aa12.79□□□□□ -0.36
HOXA3-202ENST00000396352 RPUSD1Q9UJJ7 312 aaKnown RBP12.79□□□□□ -0.36
HOXA3-202ENST00000396352 IGHV1-46P01743 117 aa12.79□□□□□ -0.36
HOXA3-202ENST00000396352 SAA1P0DJI8 122 aaPredicted RBP12.79□□□□□ -0.36
HOXA3-202ENST00000396352 TMEM136Q6ZRR5 245 aa12.79□□□□□ -0.36
HOXA3-202ENST00000396352 RTL8BQ17RB0 113 aa12.79□□□□□ -0.36
HOXA3-202ENST00000396352 ZNF788Q6ZQV5 615 aa12.79□□□□□ -0.36
HOXA3-202ENST00000396352 OR1L8Q8NGR8 309 aa12.79□□□□□ -0.36
HOXA3-202ENST00000396352 BET1LQ9NYM9 111 aa12.79□□□□□ -0.36
HOXA3-202ENST00000396352 SPINK4O60575 86 aa12.78□□□□□ -0.36
HOXA3-202ENST00000396352 C3orf36Q3SXR2 165 aa12.78□□□□□ -0.36
HOXA3-202ENST00000396352 OR10W1Q8NGF6 305 aa12.78□□□□□ -0.36
HOXA3-202ENST00000396352 FAM215AQ9Y5M1 114 aa12.78□□□□□ -0.36
HOXA3-202ENST00000396352 PSMB11A5LHX3 300 aa12.78□□□□□ -0.36
HOXA3-202ENST00000396352 TNFAIP6P98066 277 aaPredicted RBP12.78□□□□□ -0.36
HOXA3-202ENST00000396352 ZNF124Q15973 351 aa12.78□□□□□ -0.36
HOXA3-202ENST00000396352 SLC25A33Q9BSK2 321 aa12.78□□□□□ -0.36
HOXA3-202ENST00000396352 C19orf24Q9BVV8 132 aa12.78□□□□□ -0.36
HOXA3-202ENST00000396352 PARD6AQ9NPB6 346 aa12.78□□□□□ -0.36
HOXA3-202ENST00000396352 DYSFO75923 2080 aa12.78□□□□□ -0.36
HOXA3-202ENST00000396352 ISLRO14498 428 aa12.77□□□□□ -0.36
HOXA3-202ENST00000396352 TM4SF5O14894 197 aa12.77□□□□□ -0.36
HOXA3-202ENST00000396352 MORN5Q5VZ52 161 aa12.77□□□□□ -0.36
HOXA3-202ENST00000396352 OR5B3Q8NH48 314 aa12.77□□□□□ -0.36
HOXA3-202ENST00000396352 DCAF16Q9NXF7 216 aa12.77□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms