RNA–Protein interactions for RNA: ENST00000394601.8

PTBP1-204, Transcript of polypyrimidine tract binding protein 1, humanhuman

TSL 1 (best) BASIC

Gene PTBP1, Length 3,185 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTBP1-204ENST00000394601 SSBP3Q9BWW4 388 aaPredicted RBP12.82□□□□□ -0.36
PTBP1-204ENST00000394601 RNASE7Q9H1E1 156 aaKnown RBP12.82□□□□□ -0.36
PTBP1-204ENST00000394601 COX11Q9Y6N1 276 aa12.82□□□□□ -0.36
PTBP1-204ENST00000394601 IGHV3-43A0A0B4J1X8 118 aa12.81□□□□□ -0.36
PTBP1-204ENST00000394601 CRYABP02511 175 aaKnown RBP12.81□□□□□ -0.36
PTBP1-204ENST00000394601 IGHV3-43DP0DP04 118 aa12.81□□□□□ -0.36
PTBP1-204ENST00000394601 PAFAH1B2P68402 229 aa12.81□□□□□ -0.36
PTBP1-204ENST00000394601 MPV17L2Q567V2 206 aa12.81□□□□□ -0.36
PTBP1-204ENST00000394601 AMMECR1LQ6DCA0 310 aa12.81□□□□□ -0.36
PTBP1-204ENST00000394601 C1orf229Q6ZS94 237 aaPredicted RBP12.81□□□□□ -0.36
PTBP1-204ENST00000394601 C1orf174Q8IYL3 243 aa12.81□□□□□ -0.36
PTBP1-204ENST00000394601 RNF2Q99496 336 aa12.81□□□□□ -0.36
PTBP1-204ENST00000394601 GABRA2P47869 451 aa12.81□□□□□ -0.36
PTBP1-204ENST00000394601 RNASEKQ6P5S7 137 aaKnown RBP12.81□□□□□ -0.36
PTBP1-204ENST00000394601 SLC35D1Q9NTN3 355 aa12.81□□□□□ -0.36
PTBP1-204ENST00000394601 DSCAMO60469 2012 aa12.81□□□□□ -0.36
PTBP1-204ENST00000394601 POLEQ07864 2286 aa12.81□□□□□ -0.36
PTBP1-204ENST00000394601 TIMM8AO60220 97 aaPredicted RBP12.81□□□□□ -0.36
PTBP1-204ENST00000394601 TSPOP30536 169 aa12.81□□□□□ -0.36
PTBP1-204ENST00000394601 GPR6P46095 362 aaPredicted RBP12.81□□□□□ -0.36
PTBP1-204ENST00000394601 PPOXP50336 477 aa12.81□□□□□ -0.36
PTBP1-204ENST00000394601 FAM169BQ8N8A8 192 aa12.81□□□□□ -0.36
PTBP1-204ENST00000394601 FAM122AQ96E09 287 aa12.81□□□□□ -0.36
PTBP1-204ENST00000394601 NUDT11Q96G61 164 aa12.81□□□□□ -0.36
PTBP1-204ENST00000394601 TRAV17A0A0B4J275 112 aa12.8□□□□□ -0.36
PTBP1-204ENST00000394601 DEFB108AA8MXU0 73 aa12.8□□□□□ -0.36
PTBP1-204ENST00000394601 ARL14EPLP0DKL9 152 aa12.8□□□□□ -0.36
PTBP1-204ENST00000394601 PRB4P10163 310 aaPredicted RBP12.8□□□□□ -0.36
PTBP1-204ENST00000394601 CDKN1BP46527 198 aa12.8□□□□□ -0.36
PTBP1-204ENST00000394601 CAMPP49913 170 aa12.8□□□□□ -0.36
PTBP1-204ENST00000394601 CTNNBIP1Q9NSA3 81 aaPredicted RBP12.8□□□□□ -0.36
PTBP1-204ENST00000394601 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP12.8□□□□□ -0.36
PTBP1-204ENST00000394601 ITGB1BP1O14713 200 aa12.8□□□□□ -0.36
PTBP1-204ENST00000394601 HSBP1O75506 76 aa12.8□□□□□ -0.36
PTBP1-204ENST00000394601 NUDT3O95989 172 aa12.8□□□□□ -0.36
PTBP1-204ENST00000394601 ZNF134P52741 427 aa12.8□□□□□ -0.36
PTBP1-204ENST00000394601 LOXL3P58215 753 aa12.8□□□□□ -0.36
PTBP1-204ENST00000394601 PDLIM3Q53GG5 364 aaPredicted RBP12.8□□□□□ -0.36
PTBP1-204ENST00000394601 SLC24A4Q8NFF2 622 aa12.8□□□□□ -0.36
PTBP1-204ENST00000394601 RFESDQ8TAC1 157 aa12.8□□□□□ -0.36
PTBP1-204ENST00000394601 MBD3L4A6NDZ8 208 aaPredicted RBP12.79□□□□□ -0.36
PTBP1-204ENST00000394601 MBD3L3A6NE82 208 aaPredicted RBP12.79□□□□□ -0.36
PTBP1-204ENST00000394601 MBD3L5A6NJ08 208 aaPredicted RBP12.79□□□□□ -0.36
PTBP1-204ENST00000394601 SRRM5B3KS81 715 aa12.79□□□□□ -0.36
PTBP1-204ENST00000394601 SAP30O75446 220 aa12.79□□□□□ -0.36
PTBP1-204ENST00000394601 GPX1P07203 203 aa12.79□□□□□ -0.36
PTBP1-204ENST00000394601 TNFSF4P23510 183 aa12.79□□□□□ -0.36
PTBP1-204ENST00000394601 LCN2P80188 198 aa12.79□□□□□ -0.36
PTBP1-204ENST00000394601 STUMQ69YW2 141 aa12.79□□□□□ -0.36
PTBP1-204ENST00000394601 PRR27Q6MZM9 219 aa12.79□□□□□ -0.36
PTBP1-204ENST00000394601 NUDT10Q8NFP7 164 aa12.79□□□□□ -0.36
PTBP1-204ENST00000394601 MBD3L2Q8NHZ7 208 aaPredicted RBP12.79□□□□□ -0.36
PTBP1-204ENST00000394601 ADGRG4Q8IZF6 3080 aa12.79□□□□□ -0.36
PTBP1-204ENST00000394601 FBLL1A6NHQ2 334 aaKnown RBP12.79□□□□□ -0.36
PTBP1-204ENST00000394601 LHBP01229 141 aa12.79□□□□□ -0.36
PTBP1-204ENST00000394601 PRDX2P32119 198 aa12.79□□□□□ -0.36
PTBP1-204ENST00000394601 UQCRFS1P47985 274 aa12.79□□□□□ -0.36
PTBP1-204ENST00000394601 IGF2-ASQ6U949 168 aa12.79□□□□□ -0.36
PTBP1-204ENST00000394601 TCTEX1D1Q8N7M0 179 aa12.79□□□□□ -0.36
PTBP1-204ENST00000394601 SARAFQ96BY9 339 aa12.79□□□□□ -0.36
PTBP1-204ENST00000394601 MEGF9Q9H1U4 602 aa12.79□□□□□ -0.36
PTBP1-204ENST00000394601 CLEC5AQ9NY25 188 aa12.79□□□□□ -0.36
PTBP1-204ENST00000394601 DMXL2Q8TDJ6 3036 aa12.79□□□□□ -0.36
PTBP1-204ENST00000394601 SH2D7A6NKC9 451 aaPredicted RBP12.79□□□□□ -0.36
PTBP1-204ENST00000394601 AHRRA9YTQ3 701 aa12.79□□□□□ -0.36
PTBP1-204ENST00000394601 OR9G9P0C7N8 305 aa12.79□□□□□ -0.36
PTBP1-204ENST00000394601 CD24P25063 80 aa12.79□□□□□ -0.36
PTBP1-204ENST00000394601 DUTP33316 252 aaKnown RBP12.79□□□□□ -0.36
PTBP1-204ENST00000394601 CFHR2P36980 270 aa12.79□□□□□ -0.36
PTBP1-204ENST00000394601 COMPP49747 757 aaPredicted RBP12.79□□□□□ -0.36
PTBP1-204ENST00000394601 SMIM21Q3B7S5 101 aa12.79□□□□□ -0.36
PTBP1-204ENST00000394601 ZNF718Q3SXZ3 478 aa12.79□□□□□ -0.36
PTBP1-204ENST00000394601 MMD2Q8IY49 270 aa12.79□□□□□ -0.36
PTBP1-204ENST00000394601 GCSAMQ8N6F7 178 aa12.79□□□□□ -0.36
PTBP1-204ENST00000394601 LRRC29Q8WV35 223 aa12.79□□□□□ -0.36
PTBP1-204ENST00000394601 SGK494Q96LW2 274 aa12.79□□□□□ -0.36
PTBP1-204ENST00000394601 QTRT1Q9BXR0 403 aaKnown RBP12.79□□□□□ -0.36
PTBP1-204ENST00000394601 CST9LQ9H4G1 147 aa12.79□□□□□ -0.36
PTBP1-204ENST00000394601 TNCP24821 2201 aa12.79□□□□□ -0.36
PTBP1-204ENST00000394601 EP300Q09472 2414 aaPredicted RBP12.78□□□□□ -0.36
PTBP1-204ENST00000394601 C15orf62A8K5M9 175 aa12.78□□□□□ -0.36
PTBP1-204ENST00000394601 TIMP3P35625 211 aa12.78□□□□□ -0.36
PTBP1-204ENST00000394601 RPL31P62899 125 aaKnown RBP12.78□□□□□ -0.36
PTBP1-204ENST00000394601 MIC13Q5XKP0 118 aa12.78□□□□□ -0.36
PTBP1-204ENST00000394601 CGB3P0DN86 165 aa12.78□□□□□ -0.36
PTBP1-204ENST00000394601 CGB7P0DN87 165 aa12.78□□□□□ -0.36
PTBP1-204ENST00000394601 ZNF474Q6S9Z5 364 aaPredicted RBP12.78□□□□□ -0.36
PTBP1-204ENST00000394601 BHLHA15Q7RTS1 189 aaPredicted RBP12.78□□□□□ -0.36
PTBP1-204ENST00000394601 RPRMLQ8N4K4 120 aa12.78□□□□□ -0.36
PTBP1-204ENST00000394601 NPCDR1Q9BY65 106 aa12.78□□□□□ -0.36
PTBP1-204ENST00000394601 SLC45A2Q9UMX9 530 aa12.78□□□□□ -0.36
PTBP1-204ENST00000394601 PSG11Q9UQ72 335 aa12.78□□□□□ -0.36
PTBP1-204ENST00000394601 RAI1Q7Z5J4 1906 aaPredicted RBP12.77□□□□□ -0.36
PTBP1-204ENST00000394601 YPEL1O60688 119 aa12.77□□□□□ -0.36
PTBP1-204ENST00000394601 APOA2P02652 100 aa12.77□□□□□ -0.36
PTBP1-204ENST00000394601 ZNF83P51522 516 aa12.77□□□□□ -0.36
PTBP1-204ENST00000394601 MORN2Q502X0 79 aa12.77□□□□□ -0.36
PTBP1-204ENST00000394601 YPEL2Q96QA6 119 aa12.77□□□□□ -0.36
PTBP1-204ENST00000394601 HSD17B10Q99714 261 aaKnown RBP12.77□□□□□ -0.36
PTBP1-204ENST00000394601 SSBP4Q9BWG4 385 aaPredicted RBP12.77□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 77.8 ms