RNA–Protein interactions for RNA: ENST00000394440.7

CCT4-201, Transcript of chaperonin containing TCP1 subunit 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCT4, Length 2,520 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCT4-201ENST00000394440 SOX15O60248 233 aa11.98□□□□□ -0.49
CCT4-201ENST00000394440 TOX4O94842 621 aa11.98□□□□□ -0.49
CCT4-201ENST00000394440 MBP02144 154 aa11.98□□□□□ -0.49
CCT4-201ENST00000394440 COX6B1P14854 86 aa11.98□□□□□ -0.49
CCT4-201ENST00000394440 MAS1LP35410 378 aa11.98□□□□□ -0.49
CCT4-201ENST00000394440 SSBP2P81877 361 aaPredicted RBP11.98□□□□□ -0.49
CCT4-201ENST00000394440 ERHP84090 104 aaKnown RBP11.98□□□□□ -0.49
CCT4-201ENST00000394440 FFAR4Q5NUL3 377 aa11.98□□□□□ -0.49
CCT4-201ENST00000394440 PPP1R27Q86WC6 154 aa11.98□□□□□ -0.49
CCT4-201ENST00000394440 DYNAPQ8N1N2 210 aa11.98□□□□□ -0.49
CCT4-201ENST00000394440 ZNF709Q8N972 641 aa11.98□□□□□ -0.49
CCT4-201ENST00000394440 PBDC1Q9BVG4 233 aa11.98□□□□□ -0.49
CCT4-201ENST00000394440 GGTLC1Q9BX51 225 aa11.98□□□□□ -0.49
CCT4-201ENST00000394440 METTL1Q9UBP6 276 aaKnown RBP11.98□□□□□ -0.49
CCT4-201ENST00000394440 A0A1W2PRD5 423 aa11.97□□□□□ -0.49
CCT4-201ENST00000394440 A0A1W2PRF3 423 aa11.97□□□□□ -0.49
CCT4-201ENST00000394440 A0A1W2PRM7 423 aa11.97□□□□□ -0.49
CCT4-201ENST00000394440 SFTA3P0C7M3 94 aa11.97□□□□□ -0.49
CCT4-201ENST00000394440 PEA15Q15121 130 aa11.97□□□□□ -0.49
CCT4-201ENST00000394440 IGLC7A0M8Q6 106 aa11.97□□□□□ -0.49
CCT4-201ENST00000394440 F8W036 122 aa11.97□□□□□ -0.49
CCT4-201ENST00000394440 OPRK1P41145 380 aa11.97□□□□□ -0.49
CCT4-201ENST00000394440 COMPP49747 757 aaPredicted RBP11.97□□□□□ -0.49
CCT4-201ENST00000394440 CLEC2AQ6UVW9 174 aa11.97□□□□□ -0.49
CCT4-201ENST00000394440 FBXL15Q9H469 300 aa11.97□□□□□ -0.49
CCT4-201ENST00000394440 SMDT1Q9H4I9 107 aa11.97□□□□□ -0.49
CCT4-201ENST00000394440 USP9YO00507 2555 aaPredicted RBP11.96□□□□□ -0.49
CCT4-201ENST00000394440 CRYBG3Q68DQ2 2970 aa11.96□□□□□ -0.49
CCT4-201ENST00000394440 A1L4Q6 167 aa11.96□□□□□ -0.49
CCT4-201ENST00000394440 NDUFA3O95167 84 aa11.96□□□□□ -0.49
CCT4-201ENST00000394440 M6PRP20645 277 aa11.96□□□□□ -0.49
CCT4-201ENST00000394440 PAX6P26367 422 aa11.96□□□□□ -0.49
CCT4-201ENST00000394440 RPL27AP46776 148 aaKnown RBP11.96□□□□□ -0.49
CCT4-201ENST00000394440 UBE2E1P51965 193 aa11.96□□□□□ -0.49
CCT4-201ENST00000394440 CD69Q07108 199 aa11.96□□□□□ -0.49
CCT4-201ENST00000394440 CCDC144NLQ6NUI1 221 aa11.96□□□□□ -0.49
CCT4-201ENST00000394440 AJUBAQ96IF1 538 aa11.96□□□□□ -0.49
CCT4-201ENST00000394440 EIF5A2Q9GZV4 153 aaKnown RBP11.96□□□□□ -0.49
CCT4-201ENST00000394440 TBL2Q9Y4P3 447 aaKnown RBP11.96□□□□□ -0.49
CCT4-201ENST00000394440 IGHV4-30-2A0A087WSY4 118 aa11.96□□□□□ -0.5
CCT4-201ENST00000394440 RBFOX3A6NFN3 312 aa11.96□□□□□ -0.5
CCT4-201ENST00000394440 SSX2Q16385 188 aa11.96□□□□□ -0.5
CCT4-201ENST00000394440 TNXAQ16473 311 aa11.96□□□□□ -0.5
CCT4-201ENST00000394440 FBLN7Q53RD9 439 aa11.96□□□□□ -0.5
CCT4-201ENST00000394440 ZNF787Q6DD87 383 aa11.96□□□□□ -0.5
CCT4-201ENST00000394440 PVRIGQ6DKI7 326 aa11.96□□□□□ -0.5
CCT4-201ENST00000394440 TEPPQ6URK8 271 aa11.96□□□□□ -0.5
CCT4-201ENST00000394440 ATRAIDQ6UW56 229 aa11.96□□□□□ -0.5
CCT4-201ENST00000394440 LCN15Q6UWW0 184 aa11.96□□□□□ -0.5
CCT4-201ENST00000394440 NPBQ8NG41 125 aa11.96□□□□□ -0.5
CCT4-201ENST00000394440 OR10G4Q8NGN3 311 aa11.96□□□□□ -0.5
CCT4-201ENST00000394440 OR10G9Q8NGN4 311 aa11.96□□□□□ -0.5
CCT4-201ENST00000394440 OR10G7Q8NGN6 311 aa11.96□□□□□ -0.5
CCT4-201ENST00000394440 NRGNQ92686 78 aa11.96□□□□□ -0.5
CCT4-201ENST00000394440 P2RX4Q99571 388 aa11.96□□□□□ -0.5
CCT4-201ENST00000394440 NAV2Q8IVL1 2488 aa11.96□□□□□ -0.5
CCT4-201ENST00000394440 CTXND1A0A1B0GTU2 59 aa11.95□□□□□ -0.5
CCT4-201ENST00000394440 MAP1LC3B2A6NCE7 125 aa11.95□□□□□ -0.5
CCT4-201ENST00000394440 GUCA2BQ16661 112 aa11.95□□□□□ -0.5
CCT4-201ENST00000394440 ZNF114Q8NC26 417 aa11.95□□□□□ -0.5
CCT4-201ENST00000394440 EAF1Q96JC9 268 aaPredicted RBP11.95□□□□□ -0.5
CCT4-201ENST00000394440 RARRES2Q99969 163 aa11.95□□□□□ -0.5
CCT4-201ENST00000394440 MAP1LC3BQ9GZQ8 125 aa11.95□□□□□ -0.5
CCT4-201ENST00000394440 YIF1AO95070 293 aa11.95□□□□□ -0.5
CCT4-201ENST00000394440 MOSP00540 346 aa11.95□□□□□ -0.5
CCT4-201ENST00000394440 OR13C7P0DN81 318 aa11.95□□□□□ -0.5
CCT4-201ENST00000394440 EBI3Q14213 229 aa11.95□□□□□ -0.5
CCT4-201ENST00000394440 ZNF506Q5JVG8 444 aa11.95□□□□□ -0.5
CCT4-201ENST00000394440 TMEM144Q7Z5S9 345 aa11.95□□□□□ -0.5
CCT4-201ENST00000394440 SEC14L6B5MCN3 397 aa11.94□□□□□ -0.5
CCT4-201ENST00000394440 TEX22C9J3V5 150 aa11.94□□□□□ -0.5
CCT4-201ENST00000394440 NBR2O15453 112 aa11.94□□□□□ -0.5
CCT4-201ENST00000394440 ACTL6BO94805 426 aa11.94□□□□□ -0.5
CCT4-201ENST00000394440 PPT1P50897 306 aa11.94□□□□□ -0.5
CCT4-201ENST00000394440 DEFA5Q01523 94 aa11.94□□□□□ -0.5
CCT4-201ENST00000394440 PAX8Q06710 450 aa11.94□□□□□ -0.5
CCT4-201ENST00000394440 PMS2P11Q13670 270 aa11.94□□□□□ -0.5
CCT4-201ENST00000394440 GAMTQ14353 236 aa11.94□□□□□ -0.5
CCT4-201ENST00000394440 MMDQ15546 238 aa11.94□□□□□ -0.5
CCT4-201ENST00000394440 ACOT6Q3I5F7 207 aaPredicted RBP11.94□□□□□ -0.5
CCT4-201ENST00000394440 Q8N6K4 173 aa11.94□□□□□ -0.5
CCT4-201ENST00000394440 RNASEH2CQ8TDP1 164 aaKnown RBP11.94□□□□□ -0.5
CCT4-201ENST00000394440 CACNG8Q8WXS5 425 aa11.94□□□□□ -0.5
CCT4-201ENST00000394440 PERPQ96FX8 193 aa11.94□□□□□ -0.5
CCT4-201ENST00000394440 SLC25A22Q9H936 323 aa11.94□□□□□ -0.5
CCT4-201ENST00000394440 PXMP4Q9Y6I8 212 aa11.94□□□□□ -0.5
CCT4-201ENST00000394440 IGKV1OR2-108A0A075B7D4 117 aa11.94□□□□□ -0.5
CCT4-201ENST00000394440 FCN1O00602 326 aa11.94□□□□□ -0.5
CCT4-201ENST00000394440 SNRNP70P08621 437 aaKnown RBP11.94□□□□□ -0.5
CCT4-201ENST00000394440 LGALS4P56470 323 aa11.94□□□□□ -0.5
CCT4-201ENST00000394440 MIC13Q5XKP0 118 aa11.94□□□□□ -0.5
CCT4-201ENST00000394440 SVBPQ8N300 66 aa11.94□□□□□ -0.5
CCT4-201ENST00000394440 LPAR2Q9HBW0 351 aa11.94□□□□□ -0.5
CCT4-201ENST00000394440 KCNIP2Q9NS61 270 aa11.94□□□□□ -0.5
CCT4-201ENST00000394440 SLC39A9Q9NUM3 307 aa11.94□□□□□ -0.5
CCT4-201ENST00000394440 FBN2P35556 2912 aa11.93□□□□□ -0.5
CCT4-201ENST00000394440 GPX4P36969 197 aaPredicted RBP11.93□□□□□ -0.5
CCT4-201ENST00000394440 FGF8P55075 233 aaPredicted RBP11.93□□□□□ -0.5
CCT4-201ENST00000394440 CTAG1AP78358 180 aa11.93□□□□□ -0.5
CCT4-201ENST00000394440 ICAM4Q14773 271 aa11.93□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms