RNA–Protein interactions for RNA: ENST00000394269.7

TCOF1-203, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TCOF1, Length 3,400 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-203ENST00000394269 SPATA31B1PQ5VZV4 182 aa9.03□□□□□ -0.96
TCOF1-203ENST00000394269 OR8B3Q8NGG8 313 aa9.03□□□□□ -0.96
TCOF1-203ENST00000394269 RPEQ96AT9 228 aa9.03□□□□□ -0.96
TCOF1-203ENST00000394269 TMEM186Q96B77 213 aa9.03□□□□□ -0.96
TCOF1-203ENST00000394269 TIMD4Q96H15 378 aa9.03□□□□□ -0.96
TCOF1-203ENST00000394269 OR8B2Q96RD0 313 aa9.03□□□□□ -0.96
TCOF1-203ENST00000394269 SEPSECSQ9HD40 501 aaKnown RBP9.03□□□□□ -0.96
TCOF1-203ENST00000394269 IGHV2-26A0A0B4J1V2 119 aa9.03□□□□□ -0.96
TCOF1-203ENST00000394269 ZNF98A6NK75 572 aa9.03□□□□□ -0.96
TCOF1-203ENST00000394269 S100A6P06703 90 aa9.03□□□□□ -0.96
TCOF1-203ENST00000394269 ERHP84090 104 aaKnown RBP9.03□□□□□ -0.96
TCOF1-203ENST00000394269 FLI1Q01543 452 aaPredicted RBP9.03□□□□□ -0.96
TCOF1-203ENST00000394269 TNXAQ16473 311 aa9.03□□□□□ -0.96
TCOF1-203ENST00000394269 LHFPL4Q7Z7J7 247 aa9.03□□□□□ -0.96
TCOF1-203ENST00000394269 STPG3Q8N7X2 389 aa9.03□□□□□ -0.96
TCOF1-203ENST00000394269 ZNF430Q9H8G1 570 aaPredicted RBP9.03□□□□□ -0.96
TCOF1-203ENST00000394269 GAB2Q9UQC2 676 aa9.03□□□□□ -0.96
TCOF1-203ENST00000394269 TRAV1-1A0A0B4J248 108 aa9.02□□□□□ -0.96
TCOF1-203ENST00000394269 ARL14EPLP0DKL9 152 aa9.02□□□□□ -0.96
TCOF1-203ENST00000394269 OPRK1P41145 380 aa9.02□□□□□ -0.96
TCOF1-203ENST00000394269 CD81P60033 236 aa9.02□□□□□ -0.96
TCOF1-203ENST00000394269 FAM78BQ5VT40 261 aa9.02□□□□□ -0.96
TCOF1-203ENST00000394269 OSR1Q8TAX0 266 aaPredicted RBP9.02□□□□□ -0.96
TCOF1-203ENST00000394269 RAB1CQ92928 201 aa9.02□□□□□ -0.96
TCOF1-203ENST00000394269 GGTLC1Q9BX51 225 aa9.02□□□□□ -0.96
TCOF1-203ENST00000394269 LINC00574Q9H8X3 128 aa9.02□□□□□ -0.96
TCOF1-203ENST00000394269 LPAR2Q9HBW0 351 aa9.02□□□□□ -0.96
TCOF1-203ENST00000394269 WASHC3Q9Y3C0 194 aa9.02□□□□□ -0.96
TCOF1-203ENST00000394269 TIMM9Q9Y5J7 89 aa9.02□□□□□ -0.96
TCOF1-203ENST00000394269 A0A1W2PPR1 153 aa9.02□□□□□ -0.97
TCOF1-203ENST00000394269 FAM90A9PA6NNJ1 464 aa9.02□□□□□ -0.97
TCOF1-203ENST00000394269 C11orf94C9JXX5 98 aa9.02□□□□□ -0.97
TCOF1-203ENST00000394269 TNFRSF13BO14836 293 aaPredicted RBP9.02□□□□□ -0.97
TCOF1-203ENST00000394269 IL6RP08887 468 aaPredicted RBP9.02□□□□□ -0.97
TCOF1-203ENST00000394269 MDKP21741 143 aaPredicted RBP9.02□□□□□ -0.97
TCOF1-203ENST00000394269 LGALS4P56470 323 aa9.02□□□□□ -0.97
TCOF1-203ENST00000394269 KLRD1Q13241 179 aa9.02□□□□□ -0.97
TCOF1-203ENST00000394269 HES1Q14469 280 aa9.02□□□□□ -0.97
TCOF1-203ENST00000394269 WDR25Q64LD2 544 aaPredicted RBP9.02□□□□□ -0.97
TCOF1-203ENST00000394269 C11orf42Q8N5U0 333 aa9.02□□□□□ -0.97
TCOF1-203ENST00000394269 OR5AN1Q8NGI8 311 aa9.02□□□□□ -0.97
TCOF1-203ENST00000394269 OR4P4Q8NGL7 312 aa9.02□□□□□ -0.97
TCOF1-203ENST00000394269 OR1L8Q8NGR8 309 aa9.02□□□□□ -0.97
TCOF1-203ENST00000394269 BBC3Q96PG8 261 aaPredicted RBP9.02□□□□□ -0.97
TCOF1-203ENST00000394269 C1orf196B1AJZ1 125 aa9.02□□□□□ -0.97
TCOF1-203ENST00000394269 FOXH1O75593 365 aa9.02□□□□□ -0.97
TCOF1-203ENST00000394269 YIF1AO95070 293 aa9.02□□□□□ -0.97
TCOF1-203ENST00000394269 OR10J1P30954 320 aa9.02□□□□□ -0.97
TCOF1-203ENST00000394269 ATP5G3P48201 142 aa9.02□□□□□ -0.97
TCOF1-203ENST00000394269 PRRX1P54821 245 aa9.02□□□□□ -0.97
TCOF1-203ENST00000394269 PRCDQ00LT1 54 aa9.02□□□□□ -0.97
TCOF1-203ENST00000394269 RHEBQ15382 184 aa9.02□□□□□ -0.97
TCOF1-203ENST00000394269 FAM90A2PQ658T7 463 aa9.02□□□□□ -0.97
TCOF1-203ENST00000394269 KAAG1Q9UBP8 84 aa9.02□□□□□ -0.97
TCOF1-203ENST00000394269 A0A1B0GW64 132 aa9.01□□□□□ -0.97
TCOF1-203ENST00000394269 C22orf46C9J442 243 aa9.01□□□□□ -0.97
TCOF1-203ENST00000394269 RAB13P51153 203 aa9.01□□□□□ -0.97
TCOF1-203ENST00000394269 CTAG1AP78358 180 aa9.01□□□□□ -0.97
TCOF1-203ENST00000394269 MISP3Q96FF7 219 aa9.01□□□□□ -0.97
TCOF1-203ENST00000394269 SMDT1Q9H4I9 107 aa9.01□□□□□ -0.97
TCOF1-203ENST00000394269 CBLN4Q9NTU7 201 aa9.01□□□□□ -0.97
TCOF1-203ENST00000394269 IL3RAP26951 378 aa9.01□□□□□ -0.97
TCOF1-203ENST00000394269 SNRPEP62304 92 aaKnown RBP9.01□□□□□ -0.97
TCOF1-203ENST00000394269 FBXL19-AS1Q494R0 122 aa9.01□□□□□ -0.97
TCOF1-203ENST00000394269 FKBP11Q9NYL4 201 aa9.01□□□□□ -0.97
TCOF1-203ENST00000394269 TGIF2-C20orf24A0A0A6YYL0 155 aa9.01□□□□□ -0.97
TCOF1-203ENST00000394269 PGPEP1LA6NFU8 196 aa9.01□□□□□ -0.97
TCOF1-203ENST00000394269 OR10J4P0C629 311 aa9.01□□□□□ -0.97
TCOF1-203ENST00000394269 HABP2Q14520 560 aaPredicted RBP9.01□□□□□ -0.97
TCOF1-203ENST00000394269 VMA21Q3ZAQ7 101 aa9.01□□□□□ -0.97
TCOF1-203ENST00000394269 ZNF841Q6ZN19 808 aa9.01□□□□□ -0.97
TCOF1-203ENST00000394269 C15orf54Q8N8G6 183 aa9.01□□□□□ -0.97
TCOF1-203ENST00000394269 CLEC7AQ9BXN2 247 aa9.01□□□□□ -0.97
TCOF1-203ENST00000394269 FBXL15Q9H469 300 aa9.01□□□□□ -0.97
TCOF1-203ENST00000394269 NOTCH3Q9UM47 2321 aa9□□□□□ -0.97
TCOF1-203ENST00000394269 MT-ND4LP03901 98 aa9□□□□□ -0.97
TCOF1-203ENST00000394269 RAB5AP20339 215 aa9□□□□□ -0.97
TCOF1-203ENST00000394269 RAB5BP61020 215 aa9□□□□□ -0.97
TCOF1-203ENST00000394269 WT1-ASQ06250 92 aa9□□□□□ -0.97
TCOF1-203ENST00000394269 NEIL1Q96FI4 390 aaPredicted RBP9□□□□□ -0.97
TCOF1-203ENST00000394269 C12orf57Q99622 126 aa9□□□□□ -0.97
TCOF1-203ENST00000394269 DERL1Q9BUN8 251 aa9□□□□□ -0.97
TCOF1-203ENST00000394269 PARLQ9H300 379 aa9□□□□□ -0.97
TCOF1-203ENST00000394269 BET1LQ9NYM9 111 aa9□□□□□ -0.97
TCOF1-203ENST00000394269 A0A0U1RQK1 487 aa9□□□□□ -0.97
TCOF1-203ENST00000394269 OR7C2O60412 319 aa9□□□□□ -0.97
TCOF1-203ENST00000394269 NDUFB4O95168 129 aa9□□□□□ -0.97
TCOF1-203ENST00000394269 IGHV2-70P01814 119 aa9□□□□□ -0.97
TCOF1-203ENST00000394269 FOSL1P15407 271 aa9□□□□□ -0.97
TCOF1-203ENST00000394269 DLX6P56179 175 aa9□□□□□ -0.97
TCOF1-203ENST00000394269 GAMTQ14353 236 aa9□□□□□ -0.97
TCOF1-203ENST00000394269 SSX2Q16385 188 aa9□□□□□ -0.97
TCOF1-203ENST00000394269 VWC2Q2TAL6 325 aa9□□□□□ -0.97
TCOF1-203ENST00000394269 C4orf17Q53FE4 359 aa9□□□□□ -0.97
TCOF1-203ENST00000394269 Q8N7P7 452 aa9□□□□□ -0.97
TCOF1-203ENST00000394269 OR5B3Q8NH48 314 aa9□□□□□ -0.97
TCOF1-203ENST00000394269 NPIPB3Q92617 1050 aa9□□□□□ -0.97
TCOF1-203ENST00000394269 SSX3Q99909 188 aa9□□□□□ -0.97
TCOF1-203ENST00000394269 PARD6GQ9BYG4 376 aaPredicted RBP9□□□□□ -0.97
TCOF1-203ENST00000394269 C19orf84I3L1E1 186 aa8.99□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 70.9 ms