RNA–Protein interactions for RNA: ENST00000394082.8

SNRPA1-202, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 1 (best)

Gene SNRPA1, Length 556 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-202ENST00000394082 TSC22D3Q99576 134 aa12.94□□□□□ -0.34
SNRPA1-202ENST00000394082 CHRDL1Q9BU40 450 aa12.94□□□□□ -0.34
SNRPA1-202ENST00000394082 RNF167Q9H6Y7 350 aa12.94□□□□□ -0.34
SNRPA1-202ENST00000394082 MAP6D1Q9H9H5 199 aa12.94□□□□□ -0.34
SNRPA1-202ENST00000394082 IFT46Q9NQC8 304 aa12.94□□□□□ -0.34
SNRPA1-202ENST00000394082 PRNDQ9UKY0 176 aa12.94□□□□□ -0.34
SNRPA1-202ENST00000394082 OR51B2Q9Y5P1 312 aa12.94□□□□□ -0.34
SNRPA1-202ENST00000394082 KMT2AQ03164 3969 aa12.94□□□□□ -0.34
SNRPA1-202ENST00000394082 LOC100506127A0A0U1RQW1 187 aa12.93□□□□□ -0.34
SNRPA1-202ENST00000394082 RLN1P04808 185 aa12.93□□□□□ -0.34
SNRPA1-202ENST00000394082 CTSGP08311 255 aa12.93□□□□□ -0.34
SNRPA1-202ENST00000394082 TAS2R46P59540 309 aa12.93□□□□□ -0.34
SNRPA1-202ENST00000394082 RELQ04864 619 aaPredicted RBP12.93□□□□□ -0.34
SNRPA1-202ENST00000394082 PMS2P11Q13670 270 aa12.93□□□□□ -0.34
SNRPA1-202ENST00000394082 FCAMRQ8WWV6 532 aa12.93□□□□□ -0.34
SNRPA1-202ENST00000394082 OR10C1Q96KK4 312 aa12.93□□□□□ -0.34
SNRPA1-202ENST00000394082 TXN2Q99757 166 aa12.93□□□□□ -0.34
SNRPA1-202ENST00000394082 ZNF2Q9BSG1 426 aaPredicted RBP12.93□□□□□ -0.34
SNRPA1-202ENST00000394082 C6orf62Q9GZU0 229 aaPredicted RBP12.93□□□□□ -0.34
SNRPA1-202ENST00000394082 TMEM14BQ9NUH8 114 aa12.93□□□□□ -0.34
SNRPA1-202ENST00000394082 UBQLN2Q9UHD9 624 aa12.93□□□□□ -0.34
SNRPA1-202ENST00000394082 SMPXQ9UHP9 88 aa12.93□□□□□ -0.34
SNRPA1-202ENST00000394082 KRASP01116 189 aa12.92□□□□□ -0.34
SNRPA1-202ENST00000394082 RPA2P15927 270 aa12.92□□□□□ -0.34
SNRPA1-202ENST00000394082 LPAR6P43657 344 aa12.92□□□□□ -0.34
SNRPA1-202ENST00000394082 RFX2P48378 723 aa12.92□□□□□ -0.34
SNRPA1-202ENST00000394082 C20orf24Q9BUV8 137 aa12.92□□□□□ -0.34
SNRPA1-202ENST00000394082 GPR31O00270 319 aa12.91□□□□□ -0.34
SNRPA1-202ENST00000394082 CD5P06127 495 aa12.91□□□□□ -0.34
SNRPA1-202ENST00000394082 FCER2P06734 321 aa12.91□□□□□ -0.34
SNRPA1-202ENST00000394082 CTSDP07339 412 aaPredicted RBP12.91□□□□□ -0.34
SNRPA1-202ENST00000394082 UBE2NLQ5JXB2 153 aa12.91□□□□□ -0.34
SNRPA1-202ENST00000394082 ZNF114Q8NC26 417 aa12.91□□□□□ -0.34
SNRPA1-202ENST00000394082 OR6F1Q8NGZ6 308 aa12.91□□□□□ -0.34
SNRPA1-202ENST00000394082 GATAD1Q8WUU5 269 aa12.91□□□□□ -0.34
SNRPA1-202ENST00000394082 IGHV7-4-1A0A0J9YVY3 117 aa12.9□□□□□ -0.34
SNRPA1-202ENST00000394082 C15orf61A6NNL5 157 aa12.9□□□□□ -0.34
SNRPA1-202ENST00000394082 NUPL2O15504 423 aaKnown RBP12.9□□□□□ -0.34
SNRPA1-202ENST00000394082 G6PCP35575 357 aa12.9□□□□□ -0.34
SNRPA1-202ENST00000394082 Q56UQ5 140 aa12.9□□□□□ -0.34
SNRPA1-202ENST00000394082 LPCAT3Q6P1A2 487 aa12.9□□□□□ -0.34
SNRPA1-202ENST00000394082 OR5H2Q8NGV7 314 aa12.9□□□□□ -0.34
SNRPA1-202ENST00000394082 ZNF414Q96IQ9 312 aa12.9□□□□□ -0.34
SNRPA1-202ENST00000394082 HINT2Q9BX68 163 aa12.9□□□□□ -0.34
SNRPA1-202ENST00000394082 MEIS3P1A6NDR6 274 aa12.89□□□□□ -0.35
SNRPA1-202ENST00000394082 CHEK1O14757 476 aa12.89□□□□□ -0.35
SNRPA1-202ENST00000394082 S100GP29377 79 aa12.89□□□□□ -0.35
SNRPA1-202ENST00000394082 TMEM69Q5SWH9 247 aa12.89□□□□□ -0.35
SNRPA1-202ENST00000394082 UBAC2Q8NBM4 344 aa12.89□□□□□ -0.35
SNRPA1-202ENST00000394082 RNF2Q99496 336 aa12.89□□□□□ -0.35
SNRPA1-202ENST00000394082 RHPN1-AS1Q9BWJ2 59 aa12.89□□□□□ -0.35
SNRPA1-202ENST00000394082 CSTL1Q9H114 145 aa12.89□□□□□ -0.35
SNRPA1-202ENST00000394082 NSG2Q9Y328 171 aa12.89□□□□□ -0.35
SNRPA1-202ENST00000394082 I3L2K1 104 aa12.88□□□□□ -0.35
SNRPA1-202ENST00000394082 PMP2P02689 132 aa12.88□□□□□ -0.35
SNRPA1-202ENST00000394082 PRSS3P35030 304 aa12.88□□□□□ -0.35
SNRPA1-202ENST00000394082 MFAP4P55083 255 aa12.88□□□□□ -0.35
SNRPA1-202ENST00000394082 TAS2R20P59543 309 aa12.88□□□□□ -0.35
SNRPA1-202ENST00000394082 FAM90A2PQ658T7 463 aa12.88□□□□□ -0.35
SNRPA1-202ENST00000394082 LGALS9CQ6DKI2 356 aa12.88□□□□□ -0.35
SNRPA1-202ENST00000394082 LYSMD2Q8IV50 215 aa12.88□□□□□ -0.35
SNRPA1-202ENST00000394082 TMEM116Q8NCL8 245 aa12.88□□□□□ -0.35
SNRPA1-202ENST00000394082 NXF2Q9GZY0 626 aaKnown RBP12.88□□□□□ -0.35
SNRPA1-202ENST00000394082 FXYD6Q9H0Q3 95 aa12.88□□□□□ -0.35
SNRPA1-202ENST00000394082 TRAV14DV4A0A0A6YYC5 116 aa12.87□□□□□ -0.35
SNRPA1-202ENST00000394082 IGHV3-21A0A0B4J1V1 117 aa12.87□□□□□ -0.35
SNRPA1-202ENST00000394082 DBX1A6NMT0 343 aa12.87□□□□□ -0.35
SNRPA1-202ENST00000394082 MPTX1A8MV57 137 aa12.87□□□□□ -0.35
SNRPA1-202ENST00000394082 RPL35AP18077 110 aaKnown RBP12.87□□□□□ -0.35
SNRPA1-202ENST00000394082 PHLDA1Q8WV24 401 aaPredicted RBP12.87□□□□□ -0.35
SNRPA1-202ENST00000394082 SEC22AQ96IW7 307 aa12.87□□□□□ -0.35
SNRPA1-202ENST00000394082 CMTM3Q96MX0 182 aa12.87□□□□□ -0.35
SNRPA1-202ENST00000394082 C11orf68Q9H3H3 251 aaKnown RBP12.87□□□□□ -0.35
SNRPA1-202ENST00000394082 IGHV3OR16-8A0A075B7F1 116 aa12.86□□□□□ -0.35
SNRPA1-202ENST00000394082 ZNF207O43670 478 aaKnown RBP12.86□□□□□ -0.35
SNRPA1-202ENST00000394082 HRH1P35367 487 aa12.86□□□□□ -0.35
SNRPA1-202ENST00000394082 UCP3P55916 312 aa12.86□□□□□ -0.35
SNRPA1-202ENST00000394082 PAFAH1B2P68402 229 aa12.86□□□□□ -0.35
SNRPA1-202ENST00000394082 PRCDQ00LT1 54 aa12.86□□□□□ -0.35
SNRPA1-202ENST00000394082 APRG1Q8IVJ8 170 aa12.86□□□□□ -0.35
SNRPA1-202ENST00000394082 SAMD12Q8N8I0 201 aa12.86□□□□□ -0.35
SNRPA1-202ENST00000394082 SLC25A46Q96AG3 418 aa12.86□□□□□ -0.35
SNRPA1-202ENST00000394082 MFFQ9GZY8 342 aa12.86□□□□□ -0.35
SNRPA1-202ENST00000394082 TRAV2A0A0B4J234 112 aa12.85□□□□□ -0.35
SNRPA1-202ENST00000394082 RPS19P39019 145 aaKnown RBP12.85□□□□□ -0.35
SNRPA1-202ENST00000394082 H2BFWTQ7Z2G1 175 aa12.85□□□□□ -0.35
SNRPA1-202ENST00000394082 OR4A16Q8NH70 328 aa12.85□□□□□ -0.35
SNRPA1-202ENST00000394082 GPX8Q8TED1 209 aa12.85□□□□□ -0.35
SNRPA1-202ENST00000394082 RARRES2Q99969 163 aa12.85□□□□□ -0.35
SNRPA1-202ENST00000394082 GINS3Q9BRX5 216 aa12.85□□□□□ -0.35
SNRPA1-202ENST00000394082 SCPEP1Q9HB40 452 aa12.85□□□□□ -0.35
SNRPA1-202ENST00000394082 INS-IGF2F8WCM5 200 aa12.84□□□□□ -0.35
SNRPA1-202ENST00000394082 DFFBO76075 338 aa12.84□□□□□ -0.35
SNRPA1-202ENST00000394082 YIF1AO95070 293 aa12.84□□□□□ -0.35
SNRPA1-202ENST00000394082 MT-CO2P00403 227 aa12.84□□□□□ -0.35
SNRPA1-202ENST00000394082 TCTAP57738 103 aa12.84□□□□□ -0.35
SNRPA1-202ENST00000394082 HSPE1P61604 102 aaKnown RBP12.84□□□□□ -0.35
SNRPA1-202ENST00000394082 ERHP84090 104 aaKnown RBP12.84□□□□□ -0.35
SNRPA1-202ENST00000394082 TBC1D26Q86UD7 250 aa12.84□□□□□ -0.35
SNRPA1-202ENST00000394082 YIPF6Q96EC8 236 aa12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 58.4 ms