RNA–Protein interactions for RNA: ENST00000392456.3

CCDC50-202, Transcript of coiled-coil domain containing 50, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CCDC50, Length 2,454 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC50-202ENST00000392456 FBXL19-AS1Q494R0 122 aa15.68■□□□□ 0.1
CCDC50-202ENST00000392456 LCN15Q6UWW0 184 aa15.68■□□□□ 0.1
CCDC50-202ENST00000392456 LYZL2Q7Z4W2 148 aa15.68■□□□□ 0.1
CCDC50-202ENST00000392456 ZCCHC24Q8N2G6 241 aaKnown RBP15.68■□□□□ 0.1
CCDC50-202ENST00000392456 OR5C1Q8NGR4 320 aa15.68■□□□□ 0.1
CCDC50-202ENST00000392456 RDH5Q92781 318 aa15.68■□□□□ 0.1
CCDC50-202ENST00000392456 RNASE6Q93091 150 aaKnown RBP15.68■□□□□ 0.1
CCDC50-202ENST00000392456 ERRFI1Q9UJM3 462 aaPredicted RBP15.68■□□□□ 0.1
CCDC50-202ENST00000392456 TRAV24A0A0B4J272 114 aa15.68■□□□□ 0.1
CCDC50-202ENST00000392456 C3orf79P0CE67 100 aa15.68■□□□□ 0.1
CCDC50-202ENST00000392456 OMGP23515 440 aa15.68■□□□□ 0.1
CCDC50-202ENST00000392456 ADIPOQQ15848 244 aa15.68■□□□□ 0.1
CCDC50-202ENST00000392456 NUP37Q8NFH4 326 aa15.68■□□□□ 0.1
CCDC50-202ENST00000392456 ATP23Q9Y6H3 246 aa15.68■□□□□ 0.1
CCDC50-202ENST00000392456 MYO18BQ8IUG5 2567 aa15.67■□□□□ 0.1
CCDC50-202ENST00000392456 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP15.67■□□□□ 0.1
CCDC50-202ENST00000392456 GAGE10A6NGK3 116 aa15.67■□□□□ 0.1
CCDC50-202ENST00000392456 CD5LO43866 347 aa15.67■□□□□ 0.1
CCDC50-202ENST00000392456 ECI1P42126 302 aa15.67■□□□□ 0.1
CCDC50-202ENST00000392456 ZNF726P1Q15940 193 aa15.67■□□□□ 0.1
CCDC50-202ENST00000392456 CACNG8Q8WXS5 425 aa15.67■□□□□ 0.1
CCDC50-202ENST00000392456 PLPPR2Q96GM1 343 aa15.67■□□□□ 0.1
CCDC50-202ENST00000392456 THYN1Q9P016 225 aa15.67■□□□□ 0.1
CCDC50-202ENST00000392456 PLAUP00749 431 aa15.67■□□□□ 0.1
CCDC50-202ENST00000392456 IFNA1P01562 189 aa15.67■□□□□ 0.1
CCDC50-202ENST00000392456 FOXL1Q12952 345 aa15.67■□□□□ 0.1
CCDC50-202ENST00000392456 TMEM187Q14656 261 aa15.67■□□□□ 0.1
CCDC50-202ENST00000392456 Q6P435 159 aa15.67■□□□□ 0.1
CCDC50-202ENST00000392456 ATOH7Q8N100 152 aa15.67■□□□□ 0.1
CCDC50-202ENST00000392456 PLEKHF2Q9H8W4 249 aa15.67■□□□□ 0.1
CCDC50-202ENST00000392456 NPVFQ9HCQ7 196 aa15.67■□□□□ 0.1
CCDC50-202ENST00000392456 POLDIP2Q9Y2S7 368 aa15.67■□□□□ 0.1
CCDC50-202ENST00000392456 WASHC3Q9Y3C0 194 aa15.67■□□□□ 0.1
CCDC50-202ENST00000392456 ZNF462Q96JM2 2506 aa15.66■□□□□ 0.1
CCDC50-202ENST00000392456 MUC21A0A0G2JKD1 596 aa15.66■□□□□ 0.1
CCDC50-202ENST00000392456 MUC21A0A140T8X8 626 aa15.66■□□□□ 0.1
CCDC50-202ENST00000392456 SHISA9B4DS77 424 aa15.66■□□□□ 0.1
CCDC50-202ENST00000392456 CD1BP29016 333 aa15.66■□□□□ 0.1
CCDC50-202ENST00000392456 DYNLT3P51808 116 aa15.66■□□□□ 0.1
CCDC50-202ENST00000392456 KIAA1644Q3SXP7 199 aa15.66■□□□□ 0.1
CCDC50-202ENST00000392456 MUC21Q5SSG8 566 aa15.66■□□□□ 0.1
CCDC50-202ENST00000392456 RPRMQ9NS64 109 aa15.66■□□□□ 0.1
CCDC50-202ENST00000392456 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP15.66■□□□□ 0.1
CCDC50-202ENST00000392456 M0R1X1 148 aa15.66■□□□□ 0.1
CCDC50-202ENST00000392456 TLE1Q04724 770 aa15.66■□□□□ 0.1
CCDC50-202ENST00000392456 TFF3Q07654 80 aa15.66■□□□□ 0.1
CCDC50-202ENST00000392456 C20orf204Q6ZNR8 217 aa15.66■□□□□ 0.1
CCDC50-202ENST00000392456 TMEM252Q8N6L7 170 aa15.66■□□□□ 0.1
CCDC50-202ENST00000392456 C18orf12Q96KH6 178 aa15.66■□□□□ 0.1
CCDC50-202ENST00000392456 DECR2Q9NUI1 292 aa15.66■□□□□ 0.1
CCDC50-202ENST00000392456 USP9XQ93008 2570 aaPredicted RBP15.65■□□□□ 0.1
CCDC50-202ENST00000392456 FAM90A10PA6NDY2 464 aa15.65■□□□□ 0.1
CCDC50-202ENST00000392456 FAM90A18PA6NE21 464 aa15.65■□□□□ 0.1
CCDC50-202ENST00000392456 FAM90A16PA6NEW6 464 aa15.65■□□□□ 0.1
CCDC50-202ENST00000392456 FAM90A20PA6NIJ5 464 aa15.65■□□□□ 0.1
CCDC50-202ENST00000392456 FAM90A8PA6NJQ4 464 aa15.65■□□□□ 0.1
CCDC50-202ENST00000392456 FAM90A7PA6NKC0 464 aa15.65■□□□□ 0.1
CCDC50-202ENST00000392456 FAM90A22PA8MWA6 464 aa15.65■□□□□ 0.1
CCDC50-202ENST00000392456 FAM90A12PA8MX19 464 aa15.65■□□□□ 0.1
CCDC50-202ENST00000392456 FAM90A5PA8MXJ8 464 aa15.65■□□□□ 0.1
CCDC50-202ENST00000392456 FAM90A23PA8MXZ1 464 aa15.65■□□□□ 0.1
CCDC50-202ENST00000392456 TMEM250H0YL14 139 aa15.65■□□□□ 0.1
CCDC50-202ENST00000392456 ZG16O60844 167 aa15.65■□□□□ 0.1
CCDC50-202ENST00000392456 BRI3O95415 125 aa15.65■□□□□ 0.1
CCDC50-202ENST00000392456 FAM90A15PP0C7V4 464 aa15.65■□□□□ 0.1
CCDC50-202ENST00000392456 FAM90A13PP0C7W8 464 aa15.65■□□□□ 0.1
CCDC50-202ENST00000392456 FAM90A14PP0C7W9 464 aa15.65■□□□□ 0.1
CCDC50-202ENST00000392456 FAM90A24PP0C7X0 464 aa15.65■□□□□ 0.1
CCDC50-202ENST00000392456 PMCHL1Q16048 86 aa15.65■□□□□ 0.1
CCDC50-202ENST00000392456 ZC2HC1AQ96GY0 325 aa15.65■□□□□ 0.1
CCDC50-202ENST00000392456 TRAV9-2A0A087WT02 112 aa15.65■□□□□ 0.1
CCDC50-202ENST00000392456 SIRPB1O00241 398 aa15.65■□□□□ 0.1
CCDC50-202ENST00000392456 RBMXL2O75526 392 aaKnown RBP15.65■□□□□ 0.1
CCDC50-202ENST00000392456 REG1AP05451 166 aa15.65■□□□□ 0.1
CCDC50-202ENST00000392456 SP6Q3SY56 376 aa15.65■□□□□ 0.1
CCDC50-202ENST00000392456 STUMQ69YW2 141 aa15.65■□□□□ 0.1
CCDC50-202ENST00000392456 ODF3L1Q8IXM7 274 aa15.65■□□□□ 0.1
CCDC50-202ENST00000392456 LRTM2Q8N967 370 aa15.65■□□□□ 0.1
CCDC50-202ENST00000392456 LIME1Q9H400 295 aa15.65■□□□□ 0.1
CCDC50-202ENST00000392456 HES4Q9HCC6 221 aa15.65■□□□□ 0.1
CCDC50-202ENST00000392456 OR2H2O95918 312 aa15.64■□□□□ 0.09
CCDC50-202ENST00000392456 NUDT3O95989 172 aa15.64■□□□□ 0.09
CCDC50-202ENST00000392456 MEF2BQ02080 365 aaPredicted RBP15.64■□□□□ 0.09
CCDC50-202ENST00000392456 ITLN1Q8WWA0 313 aa15.64■□□□□ 0.09
CCDC50-202ENST00000392456 BBC3Q96PG8 261 aaPredicted RBP15.64■□□□□ 0.09
CCDC50-202ENST00000392456 DERL1Q9BUN8 251 aa15.64■□□□□ 0.09
CCDC50-202ENST00000392456 E7EQL1 145 aa15.63■□□□□ 0.09
CCDC50-202ENST00000392456 DEGS1O15121 323 aa15.63■□□□□ 0.09
CCDC50-202ENST00000392456 VENTXO95231 258 aa15.63■□□□□ 0.09
CCDC50-202ENST00000392456 IGHV1-46P01743 117 aa15.63■□□□□ 0.09
CCDC50-202ENST00000392456 PRB1P04280 392 aa15.63■□□□□ 0.09
CCDC50-202ENST00000392456 IGLL1P15814 213 aa15.63■□□□□ 0.09
CCDC50-202ENST00000392456 EGR1P18146 543 aa15.63■□□□□ 0.09
CCDC50-202ENST00000392456 AMTP48728 403 aa15.63■□□□□ 0.09
CCDC50-202ENST00000392456 RELBQ01201 579 aa15.63■□□□□ 0.09
CCDC50-202ENST00000392456 TMEM177Q53S58 311 aa15.63■□□□□ 0.09
CCDC50-202ENST00000392456 GEMIN7Q9H840 131 aaKnown RBP15.63■□□□□ 0.09
CCDC50-202ENST00000392456 ANXA10Q9UJ72 324 aa15.63■□□□□ 0.09
CCDC50-202ENST00000392456 SAA2-SAA4A0A096LPE2 208 aa15.63■□□□□ 0.09
CCDC50-202ENST00000392456 HERV-K104P63124 156 aa15.63■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms