RNA–Protein interactions for RNA: ENST00000392455.7

CCDC50-201, Transcript of coiled-coil domain containing 50, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CCDC50, Length 8,429 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC50-201ENST00000392455 WNK1Q9H4A3 2382 aa12.59□□□□□ -0.39
CCDC50-201ENST00000392455 CYP2G1PQ6ZSU1 146 aa12.59□□□□□ -0.39
CCDC50-201ENST00000392455 SEPSECSQ9HD40 501 aaKnown RBP12.59□□□□□ -0.39
CCDC50-201ENST00000392455 REG1BP48304 166 aa12.59□□□□□ -0.39
CCDC50-201ENST00000392455 LINC01587Q99440 93 aa12.59□□□□□ -0.39
CCDC50-201ENST00000392455 B9A039 149 aa12.59□□□□□ -0.39
CCDC50-201ENST00000392455 TMEM167AQ8TBQ9 72 aa12.59□□□□□ -0.39
CCDC50-201ENST00000392455 TNFRSF6BO95407 300 aa12.59□□□□□ -0.39
CCDC50-201ENST00000392455 MIC13Q5XKP0 118 aa12.59□□□□□ -0.39
CCDC50-201ENST00000392455 WDYHV1Q96HA8 205 aa12.59□□□□□ -0.39
CCDC50-201ENST00000392455 GDF15Q99988 308 aa12.59□□□□□ -0.39
CCDC50-201ENST00000392455 WBP1LQ9NX94 342 aa12.59□□□□□ -0.39
CCDC50-201ENST00000392455 GVINP1Q7Z2Y8 2422 aa12.59□□□□□ -0.39
CCDC50-201ENST00000392455 C9JCJ5 164 aa12.59□□□□□ -0.39
CCDC50-201ENST00000392455 ZNHIT1O43257 154 aa12.59□□□□□ -0.39
CCDC50-201ENST00000392455 NBEAP1P0C6P0 100 aa12.59□□□□□ -0.39
CCDC50-201ENST00000392455 ATP5L2Q7Z4Y8 100 aa12.59□□□□□ -0.39
CCDC50-201ENST00000392455 LINC00518Q8N0U6 118 aa12.59□□□□□ -0.39
CCDC50-201ENST00000392455 NABP2Q9BQ15 211 aa12.59□□□□□ -0.39
CCDC50-201ENST00000392455 LRP5O75197 1615 aa12.59□□□□□ -0.39
CCDC50-201ENST00000392455 TET1Q8NFU7 2136 aa12.59□□□□□ -0.39
CCDC50-201ENST00000392455 PLXNB1O43157 2135 aa12.59□□□□□ -0.39
CCDC50-201ENST00000392455 OTX1P32242 354 aaPredicted RBP12.59□□□□□ -0.39
CCDC50-201ENST00000392455 SPAARA0A1B0GVQ0 90 aa12.58□□□□□ -0.4
CCDC50-201ENST00000392455 HCP5Q6MZN7 132 aa12.58□□□□□ -0.4
CCDC50-201ENST00000392455 MEGF9Q9H1U4 602 aa12.58□□□□□ -0.4
CCDC50-201ENST00000392455 COL18A1P39060 1754 aa12.58□□□□□ -0.4
CCDC50-201ENST00000392455 TRAV24A0A0B4J272 114 aa12.58□□□□□ -0.4
CCDC50-201ENST00000392455 PPIAL4CA0A0B4J2A2 164 aa12.58□□□□□ -0.4
CCDC50-201ENST00000392455 LINC00614P0C842 121 aa12.58□□□□□ -0.4
CCDC50-201ENST00000392455 PPIAL4GP0DN37 164 aa12.58□□□□□ -0.4
CCDC50-201ENST00000392455 SAMD5Q5TGI4 173 aa12.58□□□□□ -0.4
CCDC50-201ENST00000392455 GCHFRP30047 84 aa12.58□□□□□ -0.4
CCDC50-201ENST00000392455 STHQ8IWL8 128 aa12.58□□□□□ -0.4
CCDC50-201ENST00000392455 ROS1P08922 2347 aa12.58□□□□□ -0.4
CCDC50-201ENST00000392455 NTN1O95631 604 aa12.58□□□□□ -0.4
CCDC50-201ENST00000392455 IFI6P09912 130 aa12.58□□□□□ -0.4
CCDC50-201ENST00000392455 FBLN7Q53RD9 439 aa12.58□□□□□ -0.4
CCDC50-201ENST00000392455 C18orf15Q96N68 181 aa12.58□□□□□ -0.4
CCDC50-201ENST00000392455 ADARB2-AS1A8MUL3 147 aa12.57□□□□□ -0.4
CCDC50-201ENST00000392455 LIMS2Q7Z4I7 341 aa12.57□□□□□ -0.4
CCDC50-201ENST00000392455 LAMTOR2Q9Y2Q5 125 aa12.57□□□□□ -0.4
CCDC50-201ENST00000392455 SUMO4Q6EEV6 95 aa12.57□□□□□ -0.4
CCDC50-201ENST00000392455 RASL11AQ6T310 242 aa12.57□□□□□ -0.4
CCDC50-201ENST00000392455 TRGV3P03979 118 aa12.57□□□□□ -0.4
CCDC50-201ENST00000392455 VSIG8P0DPA2 414 aa12.57□□□□□ -0.4
CCDC50-201ENST00000392455 CEACAM8P31997 349 aaPredicted RBP12.57□□□□□ -0.4
CCDC50-201ENST00000392455 TSC2P49815 1807 aa12.57□□□□□ -0.4
CCDC50-201ENST00000392455 C1orf162Q8NEQ5 155 aaPredicted RBP12.57□□□□□ -0.4
CCDC50-201ENST00000392455 ANAPC10Q9UM13 185 aa12.57□□□□□ -0.4
CCDC50-201ENST00000392455 FXYD3Q14802 87 aa12.57□□□□□ -0.4
CCDC50-201ENST00000392455 PNKDQ8N490 385 aa12.57□□□□□ -0.4
CCDC50-201ENST00000392455 FABP5P3A8MUU1 101 aa12.57□□□□□ -0.4
CCDC50-201ENST00000392455 SAA1P0DJI8 122 aaPredicted RBP12.57□□□□□ -0.4
CCDC50-201ENST00000392455 PMS2CLQ68D20 193 aa12.57□□□□□ -0.4
CCDC50-201ENST00000392455 WNT2BQ93097 391 aa12.57□□□□□ -0.4
CCDC50-201ENST00000392455 XIRP1Q702N8 1843 aaKnown RBP12.57□□□□□ -0.4
CCDC50-201ENST00000392455 ZNF48Q96MX3 618 aaPredicted RBP12.57□□□□□ -0.4
CCDC50-201ENST00000392455 LOC285556D6RIA3 1793 aa12.56□□□□□ -0.4
CCDC50-201ENST00000392455 A0A1W2PPE3 182 aa12.56□□□□□ -0.4
CCDC50-201ENST00000392455 TRPM7Q96QT4 1865 aa12.56□□□□□ -0.4
CCDC50-201ENST00000392455 TRAV8-1A0A0A6YYK1 113 aa12.56□□□□□ -0.4
CCDC50-201ENST00000392455 PATE3B3GLJ2 98 aa12.56□□□□□ -0.4
CCDC50-201ENST00000392455 RIPPLY3P57055 190 aa12.56□□□□□ -0.4
CCDC50-201ENST00000392455 SNAI3Q3KNW1 292 aa12.56□□□□□ -0.4
CCDC50-201ENST00000392455 FAM214BQ7L5A3 538 aa12.56□□□□□ -0.4
CCDC50-201ENST00000392455 ATXN7O15265 892 aaPredicted RBP12.56□□□□□ -0.4
CCDC50-201ENST00000392455 ATP5J2P56134 94 aa12.56□□□□□ -0.4
CCDC50-201ENST00000392455 DCAF10Q5QP82 559 aa12.56□□□□□ -0.4
CCDC50-201ENST00000392455 OR5P3Q8WZ94 311 aa12.56□□□□□ -0.4
CCDC50-201ENST00000392455 BHLHA9Q7RTU4 235 aa12.56□□□□□ -0.4
CCDC50-201ENST00000392455 MRPS18AQ9NVS2 196 aaKnown RBP12.56□□□□□ -0.4
CCDC50-201ENST00000392455 PLPPR1Q8TBJ4 325 aa12.56□□□□□ -0.4
CCDC50-201ENST00000392455 GP6Q9HCN6 339 aa12.56□□□□□ -0.4
CCDC50-201ENST00000392455 TRAV9-2A0A087WT02 112 aa12.55□□□□□ -0.4
CCDC50-201ENST00000392455 GNB1LQ9BYB4 327 aa12.55□□□□□ -0.4
CCDC50-201ENST00000392455 OR2H2O95918 312 aa12.55□□□□□ -0.4
CCDC50-201ENST00000392455 IGKCP01834 107 aa12.55□□□□□ -0.4
CCDC50-201ENST00000392455 CBLN1P23435 193 aa12.55□□□□□ -0.4
CCDC50-201ENST00000392455 ITLN2Q8WWU7 325 aaPredicted RBP12.55□□□□□ -0.4
CCDC50-201ENST00000392455 NCOR1P1Q9H4R4 102 aa12.55□□□□□ -0.4
CCDC50-201ENST00000392455 LOC390937A0A1W2PQ73 354 aa12.55□□□□□ -0.4
CCDC50-201ENST00000392455 CD5LO43866 347 aa12.55□□□□□ -0.4
CCDC50-201ENST00000392455 FAM90A1Q86YD7 464 aa12.55□□□□□ -0.4
CCDC50-201ENST00000392455 ATOH7Q8N100 152 aa12.55□□□□□ -0.4
CCDC50-201ENST00000392455 CHTOPQ9Y3Y2 248 aaKnown RBP12.55□□□□□ -0.4
CCDC50-201ENST00000392455 Q5PR19 223 aa12.55□□□□□ -0.4
CCDC50-201ENST00000392455 TTTY12Q9BZ98 90 aa12.55□□□□□ -0.4
CCDC50-201ENST00000392455 PRR32B1ATL7 298 aa12.55□□□□□ -0.4
CCDC50-201ENST00000392455 SIGLEC14Q08ET2 396 aa12.55□□□□□ -0.4
CCDC50-201ENST00000392455 ABHD12Q8N2K0 398 aa12.55□□□□□ -0.4
CCDC50-201ENST00000392455 TCF19Q9Y242 345 aa12.55□□□□□ -0.4
CCDC50-201ENST00000392455 ZNF479Q96JC4 524 aa12.55□□□□□ -0.4
CCDC50-201ENST00000392455 OTORQ9NRC9 128 aa12.55□□□□□ -0.4
CCDC50-201ENST00000392455 RND3P61587 244 aa12.54□□□□□ -0.4
CCDC50-201ENST00000392455 DCAF12L2Q5VW00 463 aa12.54□□□□□ -0.4
CCDC50-201ENST00000392455 TEX45Q8NA69 505 aa12.54□□□□□ -0.4
CCDC50-201ENST00000392455 NHP2Q9NX24 153 aaKnown RBP12.54□□□□□ -0.4
CCDC50-201ENST00000392455 STRCP1A6NGW2 1772 aa12.54□□□□□ -0.4
CCDC50-201ENST00000392455 PSME4Q14997 1843 aa12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms