RNA–Protein interactions for RNA: ENST00000390882.1

RNU6-440P-201, Transcript of RNA, U6 small nuclear 440, pseudogene, humanhuman

BASIC

Gene RNU6-440P, Length 105 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-440P-201ENST00000390882 IFITM2Q01629 132 aa0.37□□□□□ -2.35
RNU6-440P-201ENST00000390882 PRB3Q04118 309 aaPredicted RBP0.37□□□□□ -2.35
RNU6-440P-201ENST00000390882 DMTNQ08495 405 aa0.37□□□□□ -2.35
RNU6-440P-201ENST00000390882 COTL1Q14019 142 aa0.37□□□□□ -2.35
RNU6-440P-201ENST00000390882 HIST2H2BEQ16778 126 aa0.37□□□□□ -2.35
RNU6-440P-201ENST00000390882 HIST2H2BFQ5QNW6 126 aaPredicted RBP0.37□□□□□ -2.35
RNU6-440P-201ENST00000390882 AADACL3Q5VUY0 350 aa0.37□□□□□ -2.35
RNU6-440P-201ENST00000390882 ZNF826PQ6ZT77 177 aa0.37□□□□□ -2.35
RNU6-440P-201ENST00000390882 C10orf67Q8IYJ2 551 aa0.37□□□□□ -2.35
RNU6-440P-201ENST00000390882 C1orf158Q8N1D5 194 aa0.37□□□□□ -2.35
RNU6-440P-201ENST00000390882 RASSF5Q8WWW0 418 aa0.37□□□□□ -2.35
RNU6-440P-201ENST00000390882 HIST1H2BHQ93079 126 aa0.37□□□□□ -2.35
RNU6-440P-201ENST00000390882 HIST1H2BNQ99877 126 aa0.37□□□□□ -2.35
RNU6-440P-201ENST00000390882 HIST1H2BMQ99879 126 aa0.37□□□□□ -2.35
RNU6-440P-201ENST00000390882 WDR61Q9GZS3 305 aaKnown RBP0.37□□□□□ -2.35
RNU6-440P-201ENST00000390882 TRABDQ9H4I3 376 aa0.37□□□□□ -2.35
RNU6-440P-201ENST00000390882 XPNPEP1Q9NQW7 623 aa0.37□□□□□ -2.35
RNU6-440P-201ENST00000390882 CKLFQ9UBR5 152 aa0.37□□□□□ -2.35
RNU6-440P-201ENST00000390882 C22orf24Q9Y442 160 aa0.37□□□□□ -2.35
RNU6-440P-201ENST00000390882 LSM5Q9Y4Y9 91 aaKnown RBP0.37□□□□□ -2.35
RNU6-440P-201ENST00000390882 COL6A6A6NMZ7 2263 aa0.37□□□□□ -2.35
RNU6-440P-201ENST00000390882 PCDH15Q96QU1 1955 aa0.37□□□□□ -2.35
RNU6-440P-201ENST00000390882 RIC1Q4ADV7 1423 aa0.37□□□□□ -2.35
RNU6-440P-201ENST00000390882 MED13Q9UHV7 2174 aa0.36□□□□□ -2.35
RNU6-440P-201ENST00000390882 KIF13BQ9NQT8 1826 aa0.36□□□□□ -2.35
RNU6-440P-201ENST00000390882 MYOFQ9NZM1 2061 aa0.36□□□□□ -2.35
RNU6-440P-201ENST00000390882 BRWD1Q9NSI6 2320 aa0.36□□□□□ -2.35
RNU6-440P-201ENST00000390882 A0A087WX48 190 aa0.36□□□□□ -2.35
RNU6-440P-201ENST00000390882 IGKV1-9A0A0C4DH69 117 aa0.36□□□□□ -2.35
RNU6-440P-201ENST00000390882 DCTN3O75935 186 aa0.36□□□□□ -2.35
RNU6-440P-201ENST00000390882 IGKV1-5P01602 117 aa0.36□□□□□ -2.35
RNU6-440P-201ENST00000390882 CALB1P05937 261 aa0.36□□□□□ -2.35
RNU6-440P-201ENST00000390882 OR5G3P0C626 314 aa0.36□□□□□ -2.35
RNU6-440P-201ENST00000390882 MAGOHP61326 146 aaKnown RBP0.36□□□□□ -2.35
RNU6-440P-201ENST00000390882 PMAIP1Q13794 54 aa0.36□□□□□ -2.35
RNU6-440P-201ENST00000390882 ZNF846Q147U1 533 aa0.36□□□□□ -2.35
RNU6-440P-201ENST00000390882 GUK1Q16774 197 aa0.36□□□□□ -2.35
RNU6-440P-201ENST00000390882 SPANXN3Q5MJ09 141 aa0.36□□□□□ -2.35
RNU6-440P-201ENST00000390882 SFXN4Q6P4A7 337 aa0.36□□□□□ -2.35
RNU6-440P-201ENST00000390882 RPL22L1Q6P5R6 122 aaKnown RBP0.36□□□□□ -2.35
RNU6-440P-201ENST00000390882 DEFB128Q7Z7B8 93 aa0.36□□□□□ -2.35
RNU6-440P-201ENST00000390882 IQCF2Q8IXL9 164 aa0.36□□□□□ -2.35
RNU6-440P-201ENST00000390882 LRRC25Q8N386 305 aaPredicted RBP0.36□□□□□ -2.35
RNU6-440P-201ENST00000390882 LINC00471Q8N535 108 aa0.36□□□□□ -2.35
RNU6-440P-201ENST00000390882 WFDC11Q8NEX6 87 aa0.36□□□□□ -2.35
RNU6-440P-201ENST00000390882 OR51D1Q8NGF3 324 aa0.36□□□□□ -2.35
RNU6-440P-201ENST00000390882 OR4D11Q8NGI4 311 aa0.36□□□□□ -2.35
RNU6-440P-201ENST00000390882 AQP3Q92482 292 aa0.36□□□□□ -2.35
RNU6-440P-201ENST00000390882 TMEM106AQ96A25 262 aa0.36□□□□□ -2.35
RNU6-440P-201ENST00000390882 PTH2Q96A98 100 aa0.36□□□□□ -2.35
RNU6-440P-201ENST00000390882 SCGB3A1Q96QR1 104 aa0.36□□□□□ -2.35
RNU6-440P-201ENST00000390882 MRPL57Q9BQC6 102 aaKnown RBP0.36□□□□□ -2.35
RNU6-440P-201ENST00000390882 DERL1Q9BUN8 251 aa0.36□□□□□ -2.35
RNU6-440P-201ENST00000390882 MRPS26Q9BYN8 205 aaKnown RBP0.36□□□□□ -2.35
RNU6-440P-201ENST00000390882 CISHQ9NSE2 258 aa0.36□□□□□ -2.35
RNU6-440P-201ENST00000390882 ANAPC1Q9H1A4 1944 aa0.36□□□□□ -2.35
RNU6-440P-201ENST00000390882 ZFHX2Q9C0A1 2572 aaPredicted RBP0.36□□□□□ -2.35
RNU6-440P-201ENST00000390882 TNRC6BQ9UPQ9 1833 aaKnown RBP0.36□□□□□ -2.35
RNU6-440P-201ENST00000390882 HELZ2Q9BYK8 2649 aaKnown RBP0.35□□□□□ -2.35
RNU6-440P-201ENST00000390882 CCDC88AQ3V6T2 1871 aa0.35□□□□□ -2.35
RNU6-440P-201ENST00000390882 IGKV1D-42A0A075B6H8 117 aa0.35□□□□□ -2.35
RNU6-440P-201ENST00000390882 EEF1E1-BLOC1S5C9J1V9 151 aa0.35□□□□□ -2.35
RNU6-440P-201ENST00000390882 KCNK1O00180 336 aa0.35□□□□□ -2.35
RNU6-440P-201ENST00000390882 PSMD12O00232 456 aaPredicted RBP0.35□□□□□ -2.35
RNU6-440P-201ENST00000390882 HTR1AP08908 422 aa0.35□□□□□ -2.35
RNU6-440P-201ENST00000390882 COX6A1P12074 109 aa0.35□□□□□ -2.35
RNU6-440P-201ENST00000390882 FKBP2P26885 142 aaKnown RBP0.35□□□□□ -2.35
RNU6-440P-201ENST00000390882 BRS3P32247 399 aa0.35□□□□□ -2.35
RNU6-440P-201ENST00000390882 TCL1AP56279 114 aa0.35□□□□□ -2.35
RNU6-440P-201ENST00000390882 UBE2IP63279 158 aaKnown RBP0.35□□□□□ -2.35
RNU6-440P-201ENST00000390882 KISS1Q15726 138 aa0.35□□□□□ -2.35
RNU6-440P-201ENST00000390882 HIST3H3Q16695 136 aa0.35□□□□□ -2.35
RNU6-440P-201ENST00000390882 CDKL4Q5MAI5 379 aa0.35□□□□□ -2.35
RNU6-440P-201ENST00000390882 SPANXN5Q5MJ07 72 aa0.35□□□□□ -2.35
RNU6-440P-201ENST00000390882 LPCAT3Q6P1A2 487 aa0.35□□□□□ -2.35
RNU6-440P-201ENST00000390882 LCN15Q6UWW0 184 aa0.35□□□□□ -2.35
RNU6-440P-201ENST00000390882 ALKAL1Q6UXT8 129 aa0.35□□□□□ -2.35
RNU6-440P-201ENST00000390882 OR13C4Q8NGS5 318 aa0.35□□□□□ -2.35
RNU6-440P-201ENST00000390882 PFN4Q8NHR9 129 aa0.35□□□□□ -2.35
RNU6-440P-201ENST00000390882 SLC35B4Q969S0 331 aa0.35□□□□□ -2.35
RNU6-440P-201ENST00000390882 GINS4Q9BRT9 223 aa0.35□□□□□ -2.35
RNU6-440P-201ENST00000390882 SLC50A1Q9BRV3 221 aa0.35□□□□□ -2.35
RNU6-440P-201ENST00000390882 PRTFDC1Q9NRG1 225 aa0.35□□□□□ -2.35
RNU6-440P-201ENST00000390882 GUCA1BQ9UMX6 200 aa0.35□□□□□ -2.35
RNU6-440P-201ENST00000390882 RTTNQ86VV8 2226 aa0.35□□□□□ -2.35
RNU6-440P-201ENST00000390882 SDK1Q7Z5N4 2213 aa0.34□□□□□ -2.35
RNU6-440P-201ENST00000390882 NUP155O75694 1391 aa0.34□□□□□ -2.35
RNU6-440P-201ENST00000390882 ECM29Q5VYK3 1845 aa0.34□□□□□ -2.35
RNU6-440P-201ENST00000390882 IGKV2D-29A0A075B6S2 120 aaPredicted RBP0.34□□□□□ -2.36
RNU6-440P-201ENST00000390882 TRBV6-7A0A0A0MS04 114 aa0.34□□□□□ -2.36
RNU6-440P-201ENST00000390882 DPRXA6NFQ7 191 aa0.34□□□□□ -2.36
RNU6-440P-201ENST00000390882 TGOLN2O43493 480 aa0.34□□□□□ -2.36
RNU6-440P-201ENST00000390882 FADS1O60427 444 aa0.34□□□□□ -2.36
RNU6-440P-201ENST00000390882 HYPMO75409 117 aa0.34□□□□□ -2.36
RNU6-440P-201ENST00000390882 IFNA10P01566 189 aa0.34□□□□□ -2.36
RNU6-440P-201ENST00000390882 HLA-DRB1P01911 266 aa0.34□□□□□ -2.36
RNU6-440P-201ENST00000390882 TNNC2P02585 160 aa0.34□□□□□ -2.36
RNU6-440P-201ENST00000390882 ASAH2BP0C7U1 165 aa0.34□□□□□ -2.36
RNU6-440P-201ENST00000390882 HIST1H1EP10412 219 aaKnown RBP0.34□□□□□ -2.36
RNU6-440P-201ENST00000390882 CD79AP11912 226 aa0.34□□□□□ -2.36
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms