RNA–Protein interactions for RNA: ENST00000380443.5

VPS16-201, Transcript of VPS16, CORVET/HOPS core subunit, humanhuman

TSL 1 (best)

Gene VPS16, Length 1,825 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16-201ENST00000380443 C19orf24Q9BVV8 132 aa18.71■□□□□ 0.59
VPS16-201ENST00000380443 PKDREJQ9NTG1 2253 aa18.71■□□□□ 0.59
VPS16-201ENST00000380443 NBASA2RRP1 2371 aa18.71■□□□□ 0.59
VPS16-201ENST00000380443 AGAP20933 346 aa18.7■□□□□ 0.58
VPS16-201ENST00000380443 PRR20EP86478 221 aa18.7■□□□□ 0.58
VPS16-201ENST00000380443 PRR20CP86479 221 aa18.7■□□□□ 0.58
VPS16-201ENST00000380443 PRR20DP86480 221 aa18.7■□□□□ 0.58
VPS16-201ENST00000380443 PRR20BP86481 221 aa18.7■□□□□ 0.58
VPS16-201ENST00000380443 PRR20AP86496 221 aa18.7■□□□□ 0.58
VPS16-201ENST00000380443 TMEM241Q24JQ0 296 aa18.7■□□□□ 0.58
VPS16-201ENST00000380443 DTX2Q86UW9 622 aa18.7■□□□□ 0.58
VPS16-201ENST00000380443 FAM24BQ8N5W8 94 aa18.7■□□□□ 0.58
VPS16-201ENST00000380443 LIPFP07098 398 aa18.7■□□□□ 0.58
VPS16-201ENST00000380443 STPG3Q8N7X2 389 aa18.7■□□□□ 0.58
VPS16-201ENST00000380443 RNASEH2CQ8TDP1 164 aaKnown RBP18.7■□□□□ 0.58
VPS16-201ENST00000380443 SMIM7Q9BQ49 75 aa18.7■□□□□ 0.58
VPS16-201ENST00000380443 RELNP78509 3460 aa18.69■□□□□ 0.58
VPS16-201ENST00000380443 F6UZH7 168 aa18.69■□□□□ 0.58
VPS16-201ENST00000380443 PAGE4O60829 102 aa18.69■□□□□ 0.58
VPS16-201ENST00000380443 CD69Q07108 199 aa18.69■□□□□ 0.58
VPS16-201ENST00000380443 DIAPH2-AS1Q14236 149 aa18.69■□□□□ 0.58
VPS16-201ENST00000380443 C1QL4Q86Z23 238 aa18.69■□□□□ 0.58
VPS16-201ENST00000380443 IQCF2Q8IXL9 164 aa18.69■□□□□ 0.58
VPS16-201ENST00000380443 PNKDQ8N490 385 aa18.69■□□□□ 0.58
VPS16-201ENST00000380443 OR4F5Q8NH21 305 aa18.69■□□□□ 0.58
VPS16-201ENST00000380443 OR4F4Q96R69 305 aa18.69■□□□□ 0.58
VPS16-201ENST00000380443 RNF5Q99942 180 aa18.69■□□□□ 0.58
VPS16-201ENST00000380443 SLC45A2Q9UMX9 530 aa18.69■□□□□ 0.58
VPS16-201ENST00000380443 UBR5O95071 2799 aaPredicted RBP18.69■□□□□ 0.58
VPS16-201ENST00000380443 BUB1B-PAK6H3BSN5 160 aa18.68■□□□□ 0.58
VPS16-201ENST00000380443 MT-CO2P00403 227 aa18.68■□□□□ 0.58
VPS16-201ENST00000380443 PATZ1Q9HBE1 687 aaKnown RBP18.68■□□□□ 0.58
VPS16-201ENST00000380443 OPN1MWP04001 364 aa18.67■□□□□ 0.58
VPS16-201ENST00000380443 OPN1MW2P0DN77 364 aa18.67■□□□□ 0.58
VPS16-201ENST00000380443 OPN1MW3P0DN78 364 aa18.67■□□□□ 0.58
VPS16-201ENST00000380443 C4orf17Q53FE4 359 aa18.67■□□□□ 0.58
VPS16-201ENST00000380443 GCSAMLQ5JQS6 135 aa18.67■□□□□ 0.58
VPS16-201ENST00000380443 C11orf94C9JXX5 98 aa18.67■□□□□ 0.58
VPS16-201ENST00000380443 HABP2Q14520 560 aaPredicted RBP18.67■□□□□ 0.58
VPS16-201ENST00000380443 MMD2Q8IY49 270 aa18.67■□□□□ 0.58
VPS16-201ENST00000380443 ZNF430Q9H8G1 570 aaPredicted RBP18.67■□□□□ 0.58
VPS16-201ENST00000380443 CHODLQ9H9P2 273 aa18.67■□□□□ 0.58
VPS16-201ENST00000380443 INSIG2Q9Y5U4 225 aa18.67■□□□□ 0.58
VPS16-201ENST00000380443 ANKHD1Q8IWZ3 2542 aaKnown RBP18.67■□□□□ 0.58
VPS16-201ENST00000380443 CLDN34H7C241 214 aa18.66■□□□□ 0.58
VPS16-201ENST00000380443 CLN5O75503 358 aa18.66■□□□□ 0.58
VPS16-201ENST00000380443 TSPAN9O75954 239 aa18.66■□□□□ 0.58
VPS16-201ENST00000380443 VENTXO95231 258 aa18.66■□□□□ 0.58
VPS16-201ENST00000380443 RND2P52198 227 aa18.66■□□□□ 0.58
VPS16-201ENST00000380443 SPNS3Q6ZMD2 512 aa18.66■□□□□ 0.58
VPS16-201ENST00000380443 SSMEM1Q8WWF3 244 aa18.66■□□□□ 0.58
VPS16-201ENST00000380443 ARL2-SNX15V9GYD0 113 aa18.66■□□□□ 0.58
VPS16-201ENST00000380443 EIF3GO75821 320 aaKnown RBP eCLIP18.65■□□□□ 0.58
VPS16-201ENST00000380443 IGFBP2P18065 325 aa18.65■□□□□ 0.58
VPS16-201ENST00000380443 GAMTQ14353 236 aa18.65■□□□□ 0.58
VPS16-201ENST00000380443 M0R1W7 72 aa18.65■□□□□ 0.58
VPS16-201ENST00000380443 LINC00869P0C866 280 aa18.65■□□□□ 0.58
VPS16-201ENST00000380443 OR10W1Q8NGF6 305 aa18.65■□□□□ 0.58
VPS16-201ENST00000380443 PARLQ9H300 379 aa18.65■□□□□ 0.58
VPS16-201ENST00000380443 KLF2Q9Y5W3 355 aaPredicted RBP18.65■□□□□ 0.58
VPS16-201ENST00000380443 MYO18BQ8IUG5 2567 aa18.64■□□□□ 0.57
VPS16-201ENST00000380443 IGHV1-3A0A0C4DH29 117 aa18.64■□□□□ 0.57
VPS16-201ENST00000380443 TGOLN2O43493 480 aa18.64■□□□□ 0.57
VPS16-201ENST00000380443 ENSAO43768 121 aaKnown RBP18.64■□□□□ 0.57
VPS16-201ENST00000380443 CRYGBP07316 175 aa18.64■□□□□ 0.57
VPS16-201ENST00000380443 ARL14EPLP0DKL9 152 aa18.64■□□□□ 0.57
VPS16-201ENST00000380443 ELOBQ15370 118 aa18.64■□□□□ 0.57
VPS16-201ENST00000380443 ABHD5Q8WTS1 349 aa18.64■□□□□ 0.57
VPS16-201ENST00000380443 GATAD1Q8WUU5 269 aa18.64■□□□□ 0.57
VPS16-201ENST00000380443 HELZ2Q9BYK8 2649 aaKnown RBP18.63■□□□□ 0.57
VPS16-201ENST00000380443 SLC25A17O43808 307 aa18.63■□□□□ 0.57
VPS16-201ENST00000380443 SLC16A13Q7RTY0 426 aa18.63■□□□□ 0.57
VPS16-201ENST00000380443 RNF2Q99496 336 aa18.63■□□□□ 0.57
VPS16-201ENST00000380443 GCN1Q92616 2671 aaKnown RBP18.63■□□□□ 0.57
VPS16-201ENST00000380443 SOD3P08294 240 aa18.63■□□□□ 0.57
VPS16-201ENST00000380443 OR4P4Q8NGL7 312 aa18.63■□□□□ 0.57
VPS16-201ENST00000380443 RPEQ96AT9 228 aa18.63■□□□□ 0.57
VPS16-201ENST00000380443 RPUSD4Q96CM3 377 aaKnown RBP18.63■□□□□ 0.57
VPS16-201ENST00000380443 SAV1Q9H4B6 383 aaPredicted RBP18.63■□□□□ 0.57
VPS16-201ENST00000380443 CGB1A6NKQ9 187 aa18.62■□□□□ 0.57
VPS16-201ENST00000380443 LY6LH3BQJ8 138 aa18.62■□□□□ 0.57
VPS16-201ENST00000380443 PRSS8Q16651 343 aa18.62■□□□□ 0.57
VPS16-201ENST00000380443 PVRIGQ6DKI7 326 aa18.62■□□□□ 0.57
VPS16-201ENST00000380443 ETFRF1Q6IPR1 90 aa18.62■□□□□ 0.57
VPS16-201ENST00000380443 ZNF114Q8NC26 417 aa18.62■□□□□ 0.57
VPS16-201ENST00000380443 OR11H6Q8NGC7 330 aa18.62■□□□□ 0.57
VPS16-201ENST00000380443 DOK5Q9P104 306 aa18.62■□□□□ 0.57
VPS16-201ENST00000380443 FUT9Q9Y231 359 aa18.62■□□□□ 0.57
VPS16-201ENST00000380443 GCHFRP30047 84 aa18.61■□□□□ 0.57
VPS16-201ENST00000380443 COMPP49747 757 aaPredicted RBP18.61■□□□□ 0.57
VPS16-201ENST00000380443 WT1-ASQ06250 92 aa18.61■□□□□ 0.57
VPS16-201ENST00000380443 ZNF674Q2M3X9 581 aa18.61■□□□□ 0.57
VPS16-201ENST00000380443 C1orf122Q6ZSJ8 110 aa18.61■□□□□ 0.57
VPS16-201ENST00000380443 MOB3BQ86TA1 216 aa18.61■□□□□ 0.57
VPS16-201ENST00000380443 ONECUT1Q9UBC0 465 aa18.61■□□□□ 0.57
VPS16-201ENST00000380443 FASNP49327 2511 aaKnown RBP18.61■□□□□ 0.57
VPS16-201ENST00000380443 TENM4Q6N022 2769 aa18.61■□□□□ 0.57
VPS16-201ENST00000380443 ACTL6BO94805 426 aa18.6■□□□□ 0.57
VPS16-201ENST00000380443 DEFA4P12838 97 aa18.6■□□□□ 0.57
VPS16-201ENST00000380443 OR10J1P30954 320 aa18.6■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms