RNA–Protein interactions for RNA: ENST00000379361.4

PTCHD1-201, Transcript of patched domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTCHD1, Length 13,714 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD1-201ENST00000379361 FAM90A16PA6NEW6 464 aa9.6□□□□□ -0.87
PTCHD1-201ENST00000379361 FAM90A20PA6NIJ5 464 aa9.6□□□□□ -0.87
PTCHD1-201ENST00000379361 FAM90A8PA6NJQ4 464 aa9.6□□□□□ -0.87
PTCHD1-201ENST00000379361 FAM90A7PA6NKC0 464 aa9.6□□□□□ -0.87
PTCHD1-201ENST00000379361 FAM90A22PA8MWA6 464 aa9.6□□□□□ -0.87
PTCHD1-201ENST00000379361 FAM90A12PA8MX19 464 aa9.6□□□□□ -0.87
PTCHD1-201ENST00000379361 FAM90A5PA8MXJ8 464 aa9.6□□□□□ -0.87
PTCHD1-201ENST00000379361 FAM90A23PA8MXZ1 464 aa9.6□□□□□ -0.87
PTCHD1-201ENST00000379361 BGLAPP02818 100 aa9.6□□□□□ -0.87
PTCHD1-201ENST00000379361 FAM90A15PP0C7V4 464 aa9.6□□□□□ -0.87
PTCHD1-201ENST00000379361 FAM90A13PP0C7W8 464 aa9.6□□□□□ -0.87
PTCHD1-201ENST00000379361 FAM90A14PP0C7W9 464 aa9.6□□□□□ -0.87
PTCHD1-201ENST00000379361 FAM90A24PP0C7X0 464 aa9.6□□□□□ -0.87
PTCHD1-201ENST00000379361 LINC01555Q8NAE3 123 aa9.6□□□□□ -0.87
PTCHD1-201ENST00000379361 NGFRP08138 427 aa9.6□□□□□ -0.87
PTCHD1-201ENST00000379361 ISOC2Q96AB3 205 aa9.6□□□□□ -0.87
PTCHD1-201ENST00000379361 MMP16P51512 607 aa9.6□□□□□ -0.87
PTCHD1-201ENST00000379361 P2RY4P51582 365 aa9.6□□□□□ -0.87
PTCHD1-201ENST00000379361 LINC01560Q8TB33 94 aa9.59□□□□□ -0.87
PTCHD1-201ENST00000379361 MGST2Q99735 147 aa9.59□□□□□ -0.87
PTCHD1-201ENST00000379361 C21orf62Q9NYP8 219 aa9.59□□□□□ -0.87
PTCHD1-201ENST00000379361 IGKV1D-33P01593 117 aa9.59□□□□□ -0.87
PTCHD1-201ENST00000379361 IGKV1-33P01594 117 aa9.59□□□□□ -0.87
PTCHD1-201ENST00000379361 DRD3P35462 400 aa9.59□□□□□ -0.87
PTCHD1-201ENST00000379361 A0A1B0GUT8 65 aa9.59□□□□□ -0.87
PTCHD1-201ENST00000379361 CT62P0C5K7 136 aa9.59□□□□□ -0.87
PTCHD1-201ENST00000379361 SPNP16150 400 aa9.59□□□□□ -0.87
PTCHD1-201ENST00000379361 TIMM23BQ5SRD1 257 aa9.59□□□□□ -0.87
PTCHD1-201ENST00000379361 KCNS1Q96KK3 526 aa9.59□□□□□ -0.87
PTCHD1-201ENST00000379361 PLXNA3P51805 1871 aa9.59□□□□□ -0.87
PTCHD1-201ENST00000379361 PRSS22Q9GZN4 317 aa9.59□□□□□ -0.87
PTCHD1-201ENST00000379361 A0A1W2PP11 408 aa9.59□□□□□ -0.87
PTCHD1-201ENST00000379361 PGLYRP1O75594 196 aaPredicted RBP9.59□□□□□ -0.87
PTCHD1-201ENST00000379361 DUSP14O95147 198 aaKnown RBP9.59□□□□□ -0.87
PTCHD1-201ENST00000379361 A0A087WX48 190 aa9.59□□□□□ -0.87
PTCHD1-201ENST00000379361 FOXB2Q5VYV0 432 aa9.59□□□□□ -0.87
PTCHD1-201ENST00000379361 ZNF562Q6V9R5 426 aa9.59□□□□□ -0.87
PTCHD1-201ENST00000379361 CA1P00915 261 aaPredicted RBP9.59□□□□□ -0.87
PTCHD1-201ENST00000379361 LINC00158P58513 81 aa9.59□□□□□ -0.87
PTCHD1-201ENST00000379361 OR1P1Q8NH06 330 aa9.59□□□□□ -0.87
PTCHD1-201ENST00000379361 PLXNA4Q9HCM2 1894 aa9.59□□□□□ -0.87
PTCHD1-201ENST00000379361 TCRBV5S1A1TA0A578 114 aa9.59□□□□□ -0.87
PTCHD1-201ENST00000379361 UPK3AO75631 287 aa9.59□□□□□ -0.87
PTCHD1-201ENST00000379361 HOXB3P14651 431 aaPredicted RBP9.59□□□□□ -0.87
PTCHD1-201ENST00000379361 ASCL2Q99929 193 aa9.59□□□□□ -0.87
PTCHD1-201ENST00000379361 CXCL16Q9H2A7 254 aa9.59□□□□□ -0.87
PTCHD1-201ENST00000379361 FBXL7Q9UJT9 491 aa9.59□□□□□ -0.87
PTCHD1-201ENST00000379361 MRPS18BQ9Y676 258 aaKnown RBP9.59□□□□□ -0.87
PTCHD1-201ENST00000379361 ST20Q9HBF5 79 aa9.59□□□□□ -0.88
PTCHD1-201ENST00000379361 ATXN8Q156A1 80 aa9.58□□□□□ -0.88
PTCHD1-201ENST00000379361 SIPA1L1O43166 1804 aa9.58□□□□□ -0.88
PTCHD1-201ENST00000379361 TOMM40O96008 361 aa9.58□□□□□ -0.88
PTCHD1-201ENST00000379361 CD28P10747 220 aa9.58□□□□□ -0.88
PTCHD1-201ENST00000379361 ORMDL3Q8N138 153 aa9.58□□□□□ -0.88
PTCHD1-201ENST00000379361 V9GYH0 126 aa9.58□□□□□ -0.88
PTCHD1-201ENST00000379361 INS-IGF2F8WCM5 200 aa9.58□□□□□ -0.88
PTCHD1-201ENST00000379361 M0R2P5 195 aa9.58□□□□□ -0.88
PTCHD1-201ENST00000379361 INSP01308 110 aa9.58□□□□□ -0.88
PTCHD1-201ENST00000379361 LINC01465Q8N7H1 131 aa9.58□□□□□ -0.88
PTCHD1-201ENST00000379361 TPRX1Q8N7U7 411 aa9.58□□□□□ -0.88
PTCHD1-201ENST00000379361 R3HDMLQ9H3Y0 253 aa9.58□□□□□ -0.88
PTCHD1-201ENST00000379361 FOXA2Q9Y261 457 aaPredicted RBP9.58□□□□□ -0.88
PTCHD1-201ENST00000379361 RNF114Q9Y508 228 aa9.58□□□□□ -0.88
PTCHD1-201ENST00000379361 SIPA1L3O60292 1781 aaPredicted RBP9.58□□□□□ -0.88
PTCHD1-201ENST00000379361 FGFRL1Q8N441 504 aa9.58□□□□□ -0.88
PTCHD1-201ENST00000379361 APOMO95445 188 aa9.58□□□□□ -0.88
PTCHD1-201ENST00000379361 CD5P06127 495 aa9.58□□□□□ -0.88
PTCHD1-201ENST00000379361 PSG4Q00888 419 aa9.58□□□□□ -0.88
PTCHD1-201ENST00000379361 IGHV3OR16-13A0A075B7E8 117 aa9.58□□□□□ -0.88
PTCHD1-201ENST00000379361 IGHV3-74A0A0B4J1X5 117 aa9.58□□□□□ -0.88
PTCHD1-201ENST00000379361 COX5BP10606 129 aa9.58□□□□□ -0.88
PTCHD1-201ENST00000379361 RPP21Q9H633 154 aaKnown RBP9.58□□□□□ -0.88
PTCHD1-201ENST00000379361 FAM60AQ9NP50 221 aa9.57□□□□□ -0.88
PTCHD1-201ENST00000379361 NHSL1Q5SYE7 1610 aa9.57□□□□□ -0.88
PTCHD1-201ENST00000379361 EFNB1P98172 346 aa9.57□□□□□ -0.88
PTCHD1-201ENST00000379361 IGSF11Q5DX21 431 aa9.57□□□□□ -0.88
PTCHD1-201ENST00000379361 MYEOVQ96EZ4 313 aa9.57□□□□□ -0.88
PTCHD1-201ENST00000379361 CENPWQ5EE01 88 aa9.57□□□□□ -0.88
PTCHD1-201ENST00000379361 CHCHD5Q9BSY4 110 aa9.57□□□□□ -0.88
PTCHD1-201ENST00000379361 CLEC19AQ6UXS0 136 aa9.57□□□□□ -0.88
PTCHD1-201ENST00000379361 C3orf56Q8N813 242 aa9.57□□□□□ -0.88
PTCHD1-201ENST00000379361 CITED2Q99967 270 aaPredicted RBP9.57□□□□□ -0.88
PTCHD1-201ENST00000379361 RPP25Q9BUL9 199 aaKnown RBP9.57□□□□□ -0.88
PTCHD1-201ENST00000379361 TMEM249Q2WGJ8 235 aa9.57□□□□□ -0.88
PTCHD1-201ENST00000379361 SLC50A1Q9BRV3 221 aa9.57□□□□□ -0.88
PTCHD1-201ENST00000379361 A0A1B0GWB2 263 aa9.57□□□□□ -0.88
PTCHD1-201ENST00000379361 LTBRP36941 435 aa9.57□□□□□ -0.88
PTCHD1-201ENST00000379361 FHITP49789 147 aa9.57□□□□□ -0.88
PTCHD1-201ENST00000379361 TEX45Q8NA69 505 aa9.57□□□□□ -0.88
PTCHD1-201ENST00000379361 OR4D11Q8NGI4 311 aa9.57□□□□□ -0.88
PTCHD1-201ENST00000379361 CACNG8Q8WXS5 425 aa9.57□□□□□ -0.88
PTCHD1-201ENST00000379361 CDC42EP2O14613 210 aa9.57□□□□□ -0.88
PTCHD1-201ENST00000379361 IGHV3-23P01764 117 aa9.57□□□□□ -0.88
PTCHD1-201ENST00000379361 C1QAP02745 245 aa9.57□□□□□ -0.88
PTCHD1-201ENST00000379361 ALX4Q9H161 411 aaPredicted RBP9.57□□□□□ -0.88
PTCHD1-201ENST00000379361 ADAMTSL3P82987 1691 aa9.57□□□□□ -0.88
PTCHD1-201ENST00000379361 J3QW42 95 aa9.57□□□□□ -0.88
PTCHD1-201ENST00000379361 GCHFRP30047 84 aa9.57□□□□□ -0.88
PTCHD1-201ENST00000379361 MGAT2Q10469 447 aa9.57□□□□□ -0.88
PTCHD1-201ENST00000379361 SSBP4Q9BWG4 385 aaPredicted RBP9.57□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms