RNA–Protein interactions for RNA: ENST00000378161.5

NPHP4-202, Transcript of nephrocystin 4, humanhuman

TSL 2

Gene NPHP4, Length 4,370 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-202ENST00000378161 CELA3BP08861 270 aa9.92□□□□□ -0.82
NPHP4-202ENST00000378161 CX3CL1P78423 397 aa9.92□□□□□ -0.82
NPHP4-202ENST00000378161 AICDAQ9GZX7 198 aa9.92□□□□□ -0.82
NPHP4-202ENST00000378161 RNF115Q9Y4L5 304 aa9.92□□□□□ -0.82
NPHP4-202ENST00000378161 SPTBN2O15020 2390 aa9.92□□□□□ -0.82
NPHP4-202ENST00000378161 TDRD6O60522 2096 aaKnown RBP9.92□□□□□ -0.82
NPHP4-202ENST00000378161 A0A1W2PRD5 423 aa9.92□□□□□ -0.82
NPHP4-202ENST00000378161 A0A1W2PRF3 423 aa9.92□□□□□ -0.82
NPHP4-202ENST00000378161 A0A1W2PRM7 423 aa9.92□□□□□ -0.82
NPHP4-202ENST00000378161 C5orf67F2Z3F1 127 aa9.92□□□□□ -0.82
NPHP4-202ENST00000378161 C1orf162Q8NEQ5 155 aaPredicted RBP9.92□□□□□ -0.82
NPHP4-202ENST00000378161 DXOO77932 396 aaKnown RBP9.91□□□□□ -0.82
NPHP4-202ENST00000378161 TMEM178AQ8NBL3 297 aa9.91□□□□□ -0.82
NPHP4-202ENST00000378161 ZNF414Q96IQ9 312 aa9.91□□□□□ -0.82
NPHP4-202ENST00000378161 CCL28Q9NRJ3 127 aa9.91□□□□□ -0.82
NPHP4-202ENST00000378161 SPTA1P02549 2419 aa9.91□□□□□ -0.82
NPHP4-202ENST00000378161 TRAV25A0A0B4J276 109 aa9.91□□□□□ -0.82
NPHP4-202ENST00000378161 SMAD7O15105 426 aaKnown RBP9.91□□□□□ -0.82
NPHP4-202ENST00000378161 ARL14EPLP0DKL9 152 aa9.91□□□□□ -0.82
NPHP4-202ENST00000378161 ID3Q02535 119 aa9.91□□□□□ -0.82
NPHP4-202ENST00000378161 ZNF766Q5HY98 468 aa9.91□□□□□ -0.82
NPHP4-202ENST00000378161 TAAR6Q96RI8 345 aa9.91□□□□□ -0.82
NPHP4-202ENST00000378161 SFXN3Q9BWM7 321 aa9.91□□□□□ -0.82
NPHP4-202ENST00000378161 SSBP3Q9BWW4 388 aaPredicted RBP9.91□□□□□ -0.82
NPHP4-202ENST00000378161 ABCA7Q8IZY2 2146 aa9.91□□□□□ -0.82
NPHP4-202ENST00000378161 UNC13CQ8NB66 2214 aa9.91□□□□□ -0.82
NPHP4-202ENST00000378161 SPRY1O43609 319 aaPredicted RBP9.91□□□□□ -0.82
NPHP4-202ENST00000378161 PRTN3P24158 256 aa9.91□□□□□ -0.82
NPHP4-202ENST00000378161 CFPP27918 469 aa9.91□□□□□ -0.82
NPHP4-202ENST00000378161 TIMD4Q96H15 378 aa9.91□□□□□ -0.82
NPHP4-202ENST00000378161 HSD17B10Q99714 261 aaKnown RBP9.91□□□□□ -0.82
NPHP4-202ENST00000378161 OSTCQ9NRP0 149 aa9.91□□□□□ -0.82
NPHP4-202ENST00000378161 ZNF581Q9P0T4 197 aa9.91□□□□□ -0.82
NPHP4-202ENST00000378161 FAM90A27PA6NNH2 459 aa9.91□□□□□ -0.82
NPHP4-202ENST00000378161 PPP1R27Q86WC6 154 aa9.91□□□□□ -0.82
NPHP4-202ENST00000378161 CRIPAKQ8N1N5 446 aa9.91□□□□□ -0.82
NPHP4-202ENST00000378161 DLX4Q92988 240 aaPredicted RBP9.91□□□□□ -0.82
NPHP4-202ENST00000378161 IGHV1OR21-1A0A087WYE8 117 aa9.9□□□□□ -0.82
NPHP4-202ENST00000378161 LIPT2A6NK58 231 aa9.9□□□□□ -0.82
NPHP4-202ENST00000378161 MT-ATP8P03928 68 aa9.9□□□□□ -0.82
NPHP4-202ENST00000378161 ERVK11-1P61568 191 aa9.9□□□□□ -0.82
NPHP4-202ENST00000378161 SCN2AQ99250 2005 aa9.9□□□□□ -0.82
NPHP4-202ENST00000378161 A0A1W2PQF6 199 aa9.9□□□□□ -0.82
NPHP4-202ENST00000378161 MLNRO43193 412 aa9.9□□□□□ -0.82
NPHP4-202ENST00000378161 IGF2-ASQ6U949 168 aa9.9□□□□□ -0.82
NPHP4-202ENST00000378161 DOCK6Q96HP0 2047 aa9.9□□□□□ -0.83
NPHP4-202ENST00000378161 LOC102723996A0A087X1L8 192 aa9.9□□□□□ -0.83
NPHP4-202ENST00000378161 FCGR2BP31994 310 aaPredicted RBP9.9□□□□□ -0.83
NPHP4-202ENST00000378161 GAB4Q2WGN9 574 aa9.9□□□□□ -0.83
NPHP4-202ENST00000378161 SCGB1D4Q6XE38 83 aa9.9□□□□□ -0.83
NPHP4-202ENST00000378161 Q6ZUT4 128 aa9.9□□□□□ -0.83
NPHP4-202ENST00000378161 FOXQ1Q9C009 403 aa9.9□□□□□ -0.83
NPHP4-202ENST00000378161 TNFRSF19Q9NS68 423 aa9.9□□□□□ -0.83
NPHP4-202ENST00000378161 IGKV1D-42A0A075B6H8 117 aa9.89□□□□□ -0.83
NPHP4-202ENST00000378161 PDCD6O75340 191 aa9.89□□□□□ -0.83
NPHP4-202ENST00000378161 C16orf47Q6ZP98 133 aaPredicted RBP9.89□□□□□ -0.83
NPHP4-202ENST00000378161 Q6ZS52 159 aa9.89□□□□□ -0.83
NPHP4-202ENST00000378161 SCARF2Q96GP6 870 aaPredicted RBP9.89□□□□□ -0.83
NPHP4-202ENST00000378161 C20orf78Q9BR46 151 aa9.89□□□□□ -0.83
NPHP4-202ENST00000378161 IGHV3-15A0A0B4J1V0 119 aa9.89□□□□□ -0.83
NPHP4-202ENST00000378161 REG1BP48304 166 aa9.89□□□□□ -0.83
NPHP4-202ENST00000378161 EBLN2Q6P2I7 272 aa9.89□□□□□ -0.83
NPHP4-202ENST00000378161 SSC4DQ8WTU2 575 aa9.89□□□□□ -0.83
NPHP4-202ENST00000378161 IGLV1-36A0A0B4J1U3 117 aa9.89□□□□□ -0.83
NPHP4-202ENST00000378161 CXCL13O43927 109 aa9.89□□□□□ -0.83
NPHP4-202ENST00000378161 HBBP68871 147 aa9.89□□□□□ -0.83
NPHP4-202ENST00000378161 TBR1Q16650 682 aa9.89□□□□□ -0.83
NPHP4-202ENST00000378161 ZNF658BQ4V348 819 aaPredicted RBP9.89□□□□□ -0.83
NPHP4-202ENST00000378161 RDH5Q92781 318 aa9.89□□□□□ -0.83
NPHP4-202ENST00000378161 DUX5Q96PT3 197 aa9.89□□□□□ -0.83
NPHP4-202ENST00000378161 MCRIP2Q9BUT9 160 aaKnown RBP9.89□□□□□ -0.83
NPHP4-202ENST00000378161 B4GALT1P15291 398 aa9.89□□□□□ -0.83
NPHP4-202ENST00000378161 OPRK1P41145 380 aa9.89□□□□□ -0.83
NPHP4-202ENST00000378161 DSCR4P56555 118 aaPredicted RBP9.89□□□□□ -0.83
NPHP4-202ENST00000378161 SPATA12Q7Z6I5 190 aa9.89□□□□□ -0.83
NPHP4-202ENST00000378161 OR10J6PQ8NGY7 276 aa9.89□□□□□ -0.83
NPHP4-202ENST00000378161 C10orf35Q96D05 121 aa9.89□□□□□ -0.83
NPHP4-202ENST00000378161 C1QTNF5Q9BXJ0 243 aa9.89□□□□□ -0.83
NPHP4-202ENST00000378161 RNASE7Q9H1E1 156 aaKnown RBP9.89□□□□□ -0.83
NPHP4-202ENST00000378161 SIGLEC8Q9NYZ4 499 aa9.89□□□□□ -0.83
NPHP4-202ENST00000378161 MYLKQ15746 1914 aa9.88□□□□□ -0.83
NPHP4-202ENST00000378161 PRR33A8MZF0 331 aa9.88□□□□□ -0.83
NPHP4-202ENST00000378161 IGHV3-9P01782 118 aa9.88□□□□□ -0.83
NPHP4-202ENST00000378161 MRPL23Q16540 153 aaKnown RBP9.88□□□□□ -0.83
NPHP4-202ENST00000378161 ASXL3Q9C0F0 2248 aa9.88□□□□□ -0.83
NPHP4-202ENST00000378161 SP9P0CG40 484 aa9.88□□□□□ -0.83
NPHP4-202ENST00000378161 PPIFP30405 207 aaKnown RBP9.88□□□□□ -0.83
NPHP4-202ENST00000378161 OSR1Q8TAX0 266 aaPredicted RBP9.88□□□□□ -0.83
NPHP4-202ENST00000378161 SPANXB1Q9NS25 103 aaPredicted RBP9.88□□□□□ -0.83
NPHP4-202ENST00000378161 NCBP2LA6PVI3 153 aaKnown RBP9.88□□□□□ -0.83
NPHP4-202ENST00000378161 UFSP1Q6NVU6 142 aa9.88□□□□□ -0.83
NPHP4-202ENST00000378161 FADS6Q8N9I5 356 aa9.88□□□□□ -0.83
NPHP4-202ENST00000378161 SCN5AQ14524 2016 aa9.87□□□□□ -0.83
NPHP4-202ENST00000378161 SMIM9A6NGZ8 99 aa9.87□□□□□ -0.83
NPHP4-202ENST00000378161 F5H768 121 aa9.87□□□□□ -0.83
NPHP4-202ENST00000378161 SFTPA2Q8IWL1 248 aa9.87□□□□□ -0.83
NPHP4-202ENST00000378161 ZDHHC23Q8IYP9 409 aa9.87□□□□□ -0.83
NPHP4-202ENST00000378161 OR1L8Q8NGR8 309 aa9.87□□□□□ -0.83
NPHP4-202ENST00000378161 FOXB1Q99853 325 aa9.87□□□□□ -0.83
NPHP4-202ENST00000378161 SPANXCQ9NY87 97 aa9.87□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms