RNA–Protein interactions for RNA: ENST00000378026.4

CKAP4-201, Transcript of cytoskeleton associated protein 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CKAP4, Length 3,093 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP4-201ENST00000378026 H0Y8G0 127 aa13.07□□□□□ -0.32
CKAP4-201ENST00000378026 CER1O95813 267 aa13.07□□□□□ -0.32
CKAP4-201ENST00000378026 NPY1RP25929 384 aa13.07□□□□□ -0.32
CKAP4-201ENST00000378026 PPP1R32Q7Z5V6 425 aa13.07□□□□□ -0.32
CKAP4-201ENST00000378026 ZC2HC1AQ96GY0 325 aa13.07□□□□□ -0.32
CKAP4-201ENST00000378026 OR8B2Q96RD0 313 aa13.07□□□□□ -0.32
CKAP4-201ENST00000378026 NABP2Q9BQ15 211 aa13.07□□□□□ -0.32
CKAP4-201ENST00000378026 LY96Q9Y6Y9 160 aa13.07□□□□□ -0.32
CKAP4-201ENST00000378026 AREGP15514 252 aa13.07□□□□□ -0.32
CKAP4-201ENST00000378026 CA7P43166 264 aa13.07□□□□□ -0.32
CKAP4-201ENST00000378026 UBE2G1P62253 170 aa13.07□□□□□ -0.32
CKAP4-201ENST00000378026 TBC1D28Q2M2D7 210 aa13.07□□□□□ -0.32
CKAP4-201ENST00000378026 LYSMD4Q5XG99 296 aa13.07□□□□□ -0.32
CKAP4-201ENST00000378026 FAM214BQ7L5A3 538 aa13.07□□□□□ -0.32
CKAP4-201ENST00000378026 MCRIP2Q9BUT9 160 aaKnown RBP13.07□□□□□ -0.32
CKAP4-201ENST00000378026 BOKQ9UMX3 212 aaPredicted RBP13.07□□□□□ -0.32
CKAP4-201ENST00000378026 OR2T8A6NH00 312 aa13.07□□□□□ -0.32
CKAP4-201ENST00000378026 SGK494Q96LW2 274 aa13.07□□□□□ -0.32
CKAP4-201ENST00000378026 HES4Q9HCC6 221 aa13.07□□□□□ -0.32
CKAP4-201ENST00000378026 SPINT2O43291 252 aa13.06□□□□□ -0.32
CKAP4-201ENST00000378026 NUDT3O95989 172 aa13.06□□□□□ -0.32
CKAP4-201ENST00000378026 IGLV2-8P01709 118 aa13.06□□□□□ -0.32
CKAP4-201ENST00000378026 IGFBP4P22692 258 aa13.06□□□□□ -0.32
CKAP4-201ENST00000378026 MPV17P39210 176 aa13.06□□□□□ -0.32
CKAP4-201ENST00000378026 DUSP3P51452 185 aaPredicted RBP13.06□□□□□ -0.32
CKAP4-201ENST00000378026 MLANAQ16655 118 aa13.06□□□□□ -0.32
CKAP4-201ENST00000378026 MORN2Q502X0 79 aa13.06□□□□□ -0.32
CKAP4-201ENST00000378026 GDF5OSQ5U4N7 250 aa13.06□□□□□ -0.32
CKAP4-201ENST00000378026 SAP25Q8TEE9 199 aa13.06□□□□□ -0.32
CKAP4-201ENST00000378026 hDV102S1A0JD36 115 aa13.06□□□□□ -0.32
CKAP4-201ENST00000378026 ZNF891A8MT65 544 aaPredicted RBP13.06□□□□□ -0.32
CKAP4-201ENST00000378026 OR4A47Q6IF82 309 aa13.06□□□□□ -0.32
CKAP4-201ENST00000378026 TRAT1Q6PIZ9 186 aa13.06□□□□□ -0.32
CKAP4-201ENST00000378026 MUC15Q8N387 334 aa13.06□□□□□ -0.32
CKAP4-201ENST00000378026 OR52E5Q8NH55 327 aa13.06□□□□□ -0.32
CKAP4-201ENST00000378026 OR2T6Q8NHC8 308 aa13.06□□□□□ -0.32
CKAP4-201ENST00000378026 ZNF503Q96F45 646 aa13.06□□□□□ -0.32
CKAP4-201ENST00000378026 SMIM27A0A1W2PRY6 76 aa13.05□□□□□ -0.32
CKAP4-201ENST00000378026 IZUMO1RA6ND01 250 aa13.05□□□□□ -0.32
CKAP4-201ENST00000378026 ISLRO14498 428 aa13.05□□□□□ -0.32
CKAP4-201ENST00000378026 SMPD2O60906 423 aa13.05□□□□□ -0.32
CKAP4-201ENST00000378026 ZNF766Q5HY98 468 aa13.05□□□□□ -0.32
CKAP4-201ENST00000378026 UTF1Q5T230 341 aa13.05□□□□□ -0.32
CKAP4-201ENST00000378026 VHLLQ6RSH7 139 aa13.05□□□□□ -0.32
CKAP4-201ENST00000378026 S1PR3Q99500 378 aa13.05□□□□□ -0.32
CKAP4-201ENST00000378026 ENY2Q9NPA8 101 aa13.05□□□□□ -0.32
CKAP4-201ENST00000378026 LINC00869P0C866 280 aa13.05□□□□□ -0.32
CKAP4-201ENST00000378026 OR5B3Q8NH48 314 aa13.05□□□□□ -0.32
CKAP4-201ENST00000378026 TNFRSF19Q9NS68 423 aa13.05□□□□□ -0.32
CKAP4-201ENST00000378026 ZFHX4Q86UP3 3567 aa13.05□□□□□ -0.32
CKAP4-201ENST00000378026 TRAV5A0A0B4J249 113 aa13.04□□□□□ -0.32
CKAP4-201ENST00000378026 CYC1P08574 325 aa13.04□□□□□ -0.32
CKAP4-201ENST00000378026 FOXA3P55318 350 aaPredicted RBP13.04□□□□□ -0.32
CKAP4-201ENST00000378026 PLGLB1Q02325 96 aa13.04□□□□□ -0.32
CKAP4-201ENST00000378026 SVILO95425 2214 aa13.04□□□□□ -0.32
CKAP4-201ENST00000378026 REG1AP05451 166 aa13.04□□□□□ -0.32
CKAP4-201ENST00000378026 TMPRSS3P57727 454 aa13.04□□□□□ -0.32
CKAP4-201ENST00000378026 AMMECR1LQ6DCA0 310 aa13.04□□□□□ -0.32
CKAP4-201ENST00000378026 LINC00696Q6ZRV3 163 aa13.04□□□□□ -0.32
CKAP4-201ENST00000378026 LINC00173Q6ZV60 143 aa13.04□□□□□ -0.32
CKAP4-201ENST00000378026 OR2D3Q8NGH3 330 aa13.04□□□□□ -0.32
CKAP4-201ENST00000378026 CST9LQ9H4G1 147 aa13.04□□□□□ -0.32
CKAP4-201ENST00000378026 TMEM167BQ9NRX6 74 aa13.04□□□□□ -0.32
CKAP4-201ENST00000378026 TRAV30A0A087WSZ9 112 aa13.04□□□□□ -0.32
CKAP4-201ENST00000378026 OR4C46A6NHA9 309 aa13.04□□□□□ -0.32
CKAP4-201ENST00000378026 H0YJW9 148 aa13.04□□□□□ -0.32
CKAP4-201ENST00000378026 ZNF134P52741 427 aa13.04□□□□□ -0.32
CKAP4-201ENST00000378026 RAB30Q15771 203 aa13.04□□□□□ -0.32
CKAP4-201ENST00000378026 WDR31Q8NA23 367 aa13.04□□□□□ -0.32
CKAP4-201ENST00000378026 CFIP05156 583 aa13.03□□□□□ -0.32
CKAP4-201ENST00000378026 SP1P08047 785 aa13.03□□□□□ -0.32
CKAP4-201ENST00000378026 COX19Q49B96 90 aa13.03□□□□□ -0.32
CKAP4-201ENST00000378026 ACP7Q6ZNF0 438 aa13.03□□□□□ -0.32
CKAP4-201ENST00000378026 OR8B3Q8NGG8 313 aa13.03□□□□□ -0.32
CKAP4-201ENST00000378026 MUC21A0A0G2JKD1 596 aa13.03□□□□□ -0.32
CKAP4-201ENST00000378026 MUC21A0A140T8X8 626 aa13.03□□□□□ -0.32
CKAP4-201ENST00000378026 C2orf70A6NJV1 201 aa13.03□□□□□ -0.32
CKAP4-201ENST00000378026 CORTO00230 105 aa13.03□□□□□ -0.32
CKAP4-201ENST00000378026 PRR20EP86478 221 aa13.03□□□□□ -0.32
CKAP4-201ENST00000378026 PRR20CP86479 221 aa13.03□□□□□ -0.32
CKAP4-201ENST00000378026 PRR20DP86480 221 aa13.03□□□□□ -0.32
CKAP4-201ENST00000378026 PRR20BP86481 221 aa13.03□□□□□ -0.32
CKAP4-201ENST00000378026 PRR20AP86496 221 aa13.03□□□□□ -0.32
CKAP4-201ENST00000378026 SSPNQ14714 243 aa13.03□□□□□ -0.32
CKAP4-201ENST00000378026 MUC21Q5SSG8 566 aa13.03□□□□□ -0.32
CKAP4-201ENST00000378026 HES3Q5TGS1 186 aa13.03□□□□□ -0.32
CKAP4-201ENST00000378026 ZNF841Q6ZN19 808 aa13.03□□□□□ -0.32
CKAP4-201ENST00000378026 C1orf229Q6ZS94 237 aaPredicted RBP13.03□□□□□ -0.32
CKAP4-201ENST00000378026 PNKDQ8N490 385 aa13.03□□□□□ -0.32
CKAP4-201ENST00000378026 NUP35Q8NFH5 326 aa13.03□□□□□ -0.32
CKAP4-201ENST00000378026 TRIB1Q96RU8 372 aa13.03□□□□□ -0.32
CKAP4-201ENST00000378026 LYZL6O75951 148 aa13.02□□□□□ -0.32
CKAP4-201ENST00000378026 C11orf53Q8IXP5 236 aa13.02□□□□□ -0.32
CKAP4-201ENST00000378026 BCL2L2Q92843 193 aaPredicted RBP13.02□□□□□ -0.32
CKAP4-201ENST00000378026 MRPL27Q9P0M9 148 aaKnown RBP13.02□□□□□ -0.32
CKAP4-201ENST00000378026 ARFGEF3Q5TH69 2177 aa13.02□□□□□ -0.32
CKAP4-201ENST00000378026 ICE1Q9Y2F5 2266 aa13.02□□□□□ -0.32
CKAP4-201ENST00000378026 IGKV1OR2-108A0A075B7D4 117 aa13.02□□□□□ -0.33
CKAP4-201ENST00000378026 PPOXP50336 477 aa13.02□□□□□ -0.33
CKAP4-201ENST00000378026 AARDQ4LEZ3 155 aa13.02□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms