RNA–Protein interactions for RNA: ENST00000376659.9

TRIM39-202, Transcript of tripartite motif containing 39, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TRIM39, Length 3,535 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-202ENST00000376659 HNF4GQ14541 408 aa7.79□□□□□ -1.16
TRIM39-202ENST00000376659 MIC13Q5XKP0 118 aa7.79□□□□□ -1.16
TRIM39-202ENST00000376659 RUSC1-AS1Q66K80 236 aa7.79□□□□□ -1.16
TRIM39-202ENST00000376659 FAM71F2Q6NXP2 309 aa7.79□□□□□ -1.16
TRIM39-202ENST00000376659 NDUFA4L2Q9NRX3 87 aa7.79□□□□□ -1.16
TRIM39-202ENST00000376659 ELOVL5Q9NYP7 299 aa7.79□□□□□ -1.16
TRIM39-202ENST00000376659 TEX50A0A1B0GTY4 177 aa7.78□□□□□ -1.16
TRIM39-202ENST00000376659 H0YJW9 148 aa7.78□□□□□ -1.16
TRIM39-202ENST00000376659 M0R143 59 aa7.78□□□□□ -1.16
TRIM39-202ENST00000376659 SRP14P37108 136 aaKnown RBP7.78□□□□□ -1.16
TRIM39-202ENST00000376659 C2orf83Q53S99 150 aa7.78□□□□□ -1.16
TRIM39-202ENST00000376659 LINC00311Q8N616 119 aa7.78□□□□□ -1.16
TRIM39-202ENST00000376659 CLUHP3Q96NS8 147 aa7.78□□□□□ -1.16
TRIM39-202ENST00000376659 S1PR3Q99500 378 aa7.78□□□□□ -1.16
TRIM39-202ENST00000376659 CCL13Q99616 98 aa7.78□□□□□ -1.16
TRIM39-202ENST00000376659 SNHG12Q9BXW3 62 aa7.78□□□□□ -1.16
TRIM39-202ENST00000376659 GNG12Q9UBI6 72 aa7.78□□□□□ -1.16
TRIM39-202ENST00000376659 CNOT1A5YKK6 2376 aaKnown RBP7.78□□□□□ -1.16
TRIM39-202ENST00000376659 RNASE2P10153 161 aaKnown RBP7.78□□□□□ -1.16
TRIM39-202ENST00000376659 HSPE1P61604 102 aaKnown RBP7.78□□□□□ -1.16
TRIM39-202ENST00000376659 ZNF674Q2M3X9 581 aa7.78□□□□□ -1.16
TRIM39-202ENST00000376659 TMEM177Q53S58 311 aa7.78□□□□□ -1.16
TRIM39-202ENST00000376659 MOB3BQ86TA1 216 aa7.78□□□□□ -1.16
TRIM39-202ENST00000376659 STPG3Q8N7X2 389 aa7.78□□□□□ -1.16
TRIM39-202ENST00000376659 ANAPC16Q96DE5 110 aa7.78□□□□□ -1.16
TRIM39-202ENST00000376659 TPRP12270 2363 aaKnown RBP7.78□□□□□ -1.16
TRIM39-202ENST00000376659 EP300Q09472 2414 aaPredicted RBP7.78□□□□□ -1.16
TRIM39-202ENST00000376659 YLPM1P49750 1951 aaKnown RBP7.78□□□□□ -1.16
TRIM39-202ENST00000376659 IGKV1D-37A0A075B6S9 117 aa7.78□□□□□ -1.16
TRIM39-202ENST00000376659 C17orf100A8MU93 164 aa7.78□□□□□ -1.16
TRIM39-202ENST00000376659 TMEM178BH3BS89 294 aa7.78□□□□□ -1.16
TRIM39-202ENST00000376659 LOXP28300 417 aaPredicted RBP7.78□□□□□ -1.16
TRIM39-202ENST00000376659 BMI1P35226 326 aa7.78□□□□□ -1.16
TRIM39-202ENST00000376659 S100A7AQ86SG5 101 aa7.78□□□□□ -1.16
TRIM39-202ENST00000376659 SLC24A4Q8NFF2 622 aa7.78□□□□□ -1.16
TRIM39-202ENST00000376659 GAL3ST2Q9H3Q3 398 aa7.78□□□□□ -1.16
TRIM39-202ENST00000376659 ITPR1Q14643 2758 aa7.77□□□□□ -1.16
TRIM39-202ENST00000376659 A6NJY4 79 aa7.77□□□□□ -1.17
TRIM39-202ENST00000376659 IGLV2-8P01709 118 aa7.77□□□□□ -1.17
TRIM39-202ENST00000376659 CRYGBP07316 175 aa7.77□□□□□ -1.17
TRIM39-202ENST00000376659 MEF2CQ06413 473 aaPredicted RBP7.77□□□□□ -1.17
TRIM39-202ENST00000376659 SMIM15Q7Z3B0 74 aa7.77□□□□□ -1.17
TRIM39-202ENST00000376659 TMEM183AQ8IXX5 376 aa7.77□□□□□ -1.17
TRIM39-202ENST00000376659 OR1L8Q8NGR8 309 aa7.77□□□□□ -1.17
TRIM39-202ENST00000376659 OR4F5Q8NH21 305 aa7.77□□□□□ -1.17
TRIM39-202ENST00000376659 RPUSD4Q96CM3 377 aaKnown RBP7.77□□□□□ -1.17
TRIM39-202ENST00000376659 IGF2BP2-AS1Q96M15 143 aa7.77□□□□□ -1.17
TRIM39-202ENST00000376659 OR4F4Q96R69 305 aa7.77□□□□□ -1.17
TRIM39-202ENST00000376659 TP53TG3Q9ULZ0 132 aa7.77□□□□□ -1.17
TRIM39-202ENST00000376659 PTPRZ1P23471 2315 aaPredicted RBP7.77□□□□□ -1.17
TRIM39-202ENST00000376659 SCO2A0A1W2PP80 73 aa7.77□□□□□ -1.17
TRIM39-202ENST00000376659 ZNF705GA8MUZ8 300 aaPredicted RBP7.77□□□□□ -1.17
TRIM39-202ENST00000376659 SIAH2O43255 324 aa7.77□□□□□ -1.17
TRIM39-202ENST00000376659 SAA1P0DJI8 122 aaPredicted RBP7.77□□□□□ -1.17
TRIM39-202ENST00000376659 BSPH1Q075Z2 132 aa7.77□□□□□ -1.17
TRIM39-202ENST00000376659 DIAPH2-AS1Q14236 149 aa7.77□□□□□ -1.17
TRIM39-202ENST00000376659 TMEM200BQ69YZ2 307 aa7.77□□□□□ -1.17
TRIM39-202ENST00000376659 OR4A16Q8NH70 328 aa7.77□□□□□ -1.17
TRIM39-202ENST00000376659 ADTRPQ96IZ2 230 aa7.77□□□□□ -1.17
TRIM39-202ENST00000376659 FAM167A-AS1Q96KT0 104 aa7.77□□□□□ -1.17
TRIM39-202ENST00000376659 KAAG1Q9UBP8 84 aa7.77□□□□□ -1.17
TRIM39-202ENST00000376659 OR51B2Q9Y5P1 312 aa7.77□□□□□ -1.17
TRIM39-202ENST00000376659 TRGV10A0A0A0MS01 117 aa7.77□□□□□ -1.17
TRIM39-202ENST00000376659 F6UZH7 168 aa7.77□□□□□ -1.17
TRIM39-202ENST00000376659 OR5G3P0C626 314 aa7.77□□□□□ -1.17
TRIM39-202ENST00000376659 FABP4P15090 132 aa7.77□□□□□ -1.17
TRIM39-202ENST00000376659 IGFBP2P18065 325 aa7.77□□□□□ -1.17
TRIM39-202ENST00000376659 GALR1P47211 349 aa7.77□□□□□ -1.17
TRIM39-202ENST00000376659 EDDM3BP56851 147 aa7.77□□□□□ -1.17
TRIM39-202ENST00000376659 SSBP2P81877 361 aaPredicted RBP7.77□□□□□ -1.17
TRIM39-202ENST00000376659 TXNDC17Q9BRA2 123 aa7.77□□□□□ -1.17
TRIM39-202ENST00000376659 SLC25A10Q9UBX3 287 aaPredicted RBP7.77□□□□□ -1.17
TRIM39-202ENST00000376659 PGPEP1LA6NFU8 196 aa7.76□□□□□ -1.17
TRIM39-202ENST00000376659 PPP1R2P9O14990 202 aa7.76□□□□□ -1.17
TRIM39-202ENST00000376659 CXorf1O96002 111 aa7.76□□□□□ -1.17
TRIM39-202ENST00000376659 NPY1RP25929 384 aa7.76□□□□□ -1.17
TRIM39-202ENST00000376659 FOXL1Q12952 345 aa7.76□□□□□ -1.17
TRIM39-202ENST00000376659 ADIRFQ15847 76 aa7.76□□□□□ -1.17
TRIM39-202ENST00000376659 TMEM95Q3KNT9 176 aa7.76□□□□□ -1.17
TRIM39-202ENST00000376659 LYPD2Q6UXB3 125 aa7.76□□□□□ -1.17
TRIM39-202ENST00000376659 PPP1R35Q8TAP8 253 aa7.76□□□□□ -1.17
TRIM39-202ENST00000376659 MRPL20Q9BYC9 149 aaKnown RBP7.76□□□□□ -1.17
TRIM39-202ENST00000376659 NPVFQ9HCQ7 196 aa7.76□□□□□ -1.17
TRIM39-202ENST00000376659 LY96Q9Y6Y9 160 aa7.76□□□□□ -1.17
TRIM39-202ENST00000376659 C9JCJ5 164 aa7.76□□□□□ -1.17
TRIM39-202ENST00000376659 AMBPP02760 352 aa7.76□□□□□ -1.17
TRIM39-202ENST00000376659 IL3RAP26951 378 aa7.76□□□□□ -1.17
TRIM39-202ENST00000376659 GCHFRP30047 84 aa7.76□□□□□ -1.17
TRIM39-202ENST00000376659 GAGE1Q13065 139 aa7.76□□□□□ -1.17
TRIM39-202ENST00000376659 ARFGEF3Q5TH69 2177 aa7.76□□□□□ -1.17
TRIM39-202ENST00000376659 MKRN2OSH3BPM6 223 aa7.75□□□□□ -1.17
TRIM39-202ENST00000376659 LCN2P80188 198 aa7.75□□□□□ -1.17
TRIM39-202ENST00000376659 HLA-DRB5Q30154 266 aa7.75□□□□□ -1.17
TRIM39-202ENST00000376659 MORN5Q5VZ52 161 aa7.75□□□□□ -1.17
TRIM39-202ENST00000376659 BEND2Q8NDZ0 799 aa7.75□□□□□ -1.17
TRIM39-202ENST00000376659 NOL4LQ96MY1 436 aaPredicted RBP7.75□□□□□ -1.17
TRIM39-202ENST00000376659 VPS25Q9BRG1 176 aa7.75□□□□□ -1.17
TRIM39-202ENST00000376659 PCGF1Q9BSM1 259 aa7.75□□□□□ -1.17
TRIM39-202ENST00000376659 SLC25A2Q9BXI2 301 aa7.75□□□□□ -1.17
TRIM39-202ENST00000376659 CACNA1HO95180 2353 aa7.75□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms