RNA–Protein interactions for RNA: ENST00000376061.8

PDPN-203, Transcript of podoplanin, humanhuman

TSL 1 (best) BASIC

Gene PDPN, Length 1,368 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-203ENST00000376061 C4BPBP20851 252 aa8.29□□□□□ -1.08
PDPN-203ENST00000376061 NPY1RP25929 384 aa8.29□□□□□ -1.08
PDPN-203ENST00000376061 CHRNA7P36544 502 aa8.29□□□□□ -1.08
PDPN-203ENST00000376061 SRP14P37108 136 aaKnown RBP8.29□□□□□ -1.08
PDPN-203ENST00000376061 IER3P46695 156 aa8.29□□□□□ -1.08
PDPN-203ENST00000376061 SULT1A1P50225 295 aa8.29□□□□□ -1.08
PDPN-203ENST00000376061 WT1-ASQ06250 92 aa8.29□□□□□ -1.08
PDPN-203ENST00000376061 BSXQ3C1V8 233 aa8.29□□□□□ -1.08
PDPN-203ENST00000376061 SLC24A4Q8NFF2 622 aa8.29□□□□□ -1.08
PDPN-203ENST00000376061 ARPC1AQ92747 370 aa8.29□□□□□ -1.08
PDPN-203ENST00000376061 RASL11BQ9BPW5 248 aa8.29□□□□□ -1.08
PDPN-203ENST00000376061 SMIM3Q9BZL3 60 aa8.29□□□□□ -1.08
PDPN-203ENST00000376061 PRDM13Q9H4Q3 707 aa8.29□□□□□ -1.08
PDPN-203ENST00000376061 PITPNC1Q9UKF7 332 aa8.29□□□□□ -1.08
PDPN-203ENST00000376061 HIVEP1P15822 2718 aa8.28□□□□□ -1.08
PDPN-203ENST00000376061 IGHV7-81A0A0B4J1V7 117 aa8.28□□□□□ -1.08
PDPN-203ENST00000376061 PMS2P5A8MQ11 134 aa8.28□□□□□ -1.08
PDPN-203ENST00000376061 CNIH1O95406 144 aa8.28□□□□□ -1.08
PDPN-203ENST00000376061 LY6G6DO95868 133 aa8.28□□□□□ -1.08
PDPN-203ENST00000376061 IFNA10P01566 189 aa8.28□□□□□ -1.08
PDPN-203ENST00000376061 RNASE2P10153 161 aaKnown RBP8.28□□□□□ -1.08
PDPN-203ENST00000376061 HNF1AP20823 631 aa8.28□□□□□ -1.08
PDPN-203ENST00000376061 HTR2BP41595 481 aa8.28□□□□□ -1.08
PDPN-203ENST00000376061 CX3CL1P78423 397 aa8.28□□□□□ -1.08
PDPN-203ENST00000376061 ARL16Q0P5N6 197 aa8.28□□□□□ -1.08
PDPN-203ENST00000376061 FXYD3Q14802 87 aa8.28□□□□□ -1.08
PDPN-203ENST00000376061 ZNF562Q6V9R5 426 aa8.28□□□□□ -1.08
PDPN-203ENST00000376061 Q6YL49 198 aa8.28□□□□□ -1.08
PDPN-203ENST00000376061 C16orf82Q7Z2V1 217 aa8.28□□□□□ -1.08
PDPN-203ENST00000376061 TMEM217Q8N7C4 229 aa8.28□□□□□ -1.08
PDPN-203ENST00000376061 OR5R1Q8NH85 324 aa8.28□□□□□ -1.08
PDPN-203ENST00000376061 HSPB9Q9BQS6 159 aa8.28□□□□□ -1.08
PDPN-203ENST00000376061 SRSF8Q9BRL6 282 aaKnown RBP8.28□□□□□ -1.08
PDPN-203ENST00000376061 WFDC1Q9HC57 220 aa8.28□□□□□ -1.08
PDPN-203ENST00000376061 CYTL1Q9NRR1 136 aa8.28□□□□□ -1.08
PDPN-203ENST00000376061 TMEM160Q9NX00 188 aa8.28□□□□□ -1.08
PDPN-203ENST00000376061 PAIP2BQ9ULR5 123 aaKnown RBP8.28□□□□□ -1.08
PDPN-203ENST00000376061 ZFHX3Q15911 3703 aa8.27□□□□□ -1.08
PDPN-203ENST00000376061 ANK3Q12955 4377 aaKnown RBP8.27□□□□□ -1.09
PDPN-203ENST00000376061 SH2D7A6NKC9 451 aaPredicted RBP8.27□□□□□ -1.09
PDPN-203ENST00000376061 TAAR5O14804 337 aa8.27□□□□□ -1.09
PDPN-203ENST00000376061 REG1AP05451 166 aa8.27□□□□□ -1.09
PDPN-203ENST00000376061 OR8U8P0C7N1 319 aa8.27□□□□□ -1.09
PDPN-203ENST00000376061 APELAP0DMC3 54 aa8.27□□□□□ -1.09
PDPN-203ENST00000376061 OR13C7P0DN81 318 aa8.27□□□□□ -1.09
PDPN-203ENST00000376061 RPP30P78346 268 aaKnown RBP8.27□□□□□ -1.09
PDPN-203ENST00000376061 CLINT1Q14677 625 aa8.27□□□□□ -1.09
PDPN-203ENST00000376061 OR8G2PQ6IF36 304 aa8.27□□□□□ -1.09
PDPN-203ENST00000376061 HSD17B13Q7Z5P4 300 aaPredicted RBP8.27□□□□□ -1.09
PDPN-203ENST00000376061 MRPL41Q8IXM3 137 aaKnown RBP8.27□□□□□ -1.09
PDPN-203ENST00000376061 SIGLECL1Q8N7X8 197 aa8.27□□□□□ -1.09
PDPN-203ENST00000376061 OR1S2Q8NGQ3 325 aa8.27□□□□□ -1.09
PDPN-203ENST00000376061 OR5C1Q8NGR4 320 aa8.27□□□□□ -1.09
PDPN-203ENST00000376061 ABHD5Q8WTS1 349 aa8.27□□□□□ -1.09
PDPN-203ENST00000376061 SSMEM1Q8WWF3 244 aa8.27□□□□□ -1.09
PDPN-203ENST00000376061 FAM103A1Q9BTL3 118 aaKnown RBP8.27□□□□□ -1.09
PDPN-203ENST00000376061 ZNF471Q9BX82 626 aaPredicted RBP8.27□□□□□ -1.09
PDPN-203ENST00000376061 VPREB3Q9UKI3 123 aa8.27□□□□□ -1.09
PDPN-203ENST00000376061 FBXO7Q9Y3I1 522 aa8.27□□□□□ -1.09
PDPN-203ENST00000376061 U3KQ87 197 aa8.27□□□□□ -1.09
PDPN-203ENST00000376061 MTORP42345 2549 aa8.26□□□□□ -1.09
PDPN-203ENST00000376061 BTBD17A6NE02 478 aa8.26□□□□□ -1.09
PDPN-203ENST00000376061 PRSS46E5RG02 174 aa8.26□□□□□ -1.09
PDPN-203ENST00000376061 J3KRW8 73 aa8.26□□□□□ -1.09
PDPN-203ENST00000376061 M0QZK8 103 aa8.26□□□□□ -1.09
PDPN-203ENST00000376061 HOXA3O43365 443 aaPredicted RBP8.26□□□□□ -1.09
PDPN-203ENST00000376061 SCAF4O95104 1147 aaKnown RBP8.26□□□□□ -1.09
PDPN-203ENST00000376061 PF4P02776 101 aa8.26□□□□□ -1.09
PDPN-203ENST00000376061 EGR2P11161 476 aaPredicted RBP8.26□□□□□ -1.09
PDPN-203ENST00000376061 CD99P14209 185 aa8.26□□□□□ -1.09
PDPN-203ENST00000376061 FOSL1P15407 271 aa8.26□□□□□ -1.09
PDPN-203ENST00000376061 SNCAP37840 140 aa8.26□□□□□ -1.09
PDPN-203ENST00000376061 HBG1P69891 147 aa8.26□□□□□ -1.09
PDPN-203ENST00000376061 HBG2P69892 147 aa8.26□□□□□ -1.09
PDPN-203ENST00000376061 ERHP84090 104 aaKnown RBP8.26□□□□□ -1.09
PDPN-203ENST00000376061 IFITM2Q01629 132 aa8.26□□□□□ -1.09
PDPN-203ENST00000376061 SLC38A11Q08AI6 406 aa8.26□□□□□ -1.09
PDPN-203ENST00000376061 C2orf83Q53S99 150 aa8.26□□□□□ -1.09
PDPN-203ENST00000376061 RPL7L1Q6DKI1 246 aaKnown RBP8.26□□□□□ -1.09
PDPN-203ENST00000376061 SLC51BQ86UW2 128 aa8.26□□□□□ -1.09
PDPN-203ENST00000376061 ZNF114Q8NC26 417 aa8.26□□□□□ -1.09
PDPN-203ENST00000376061 STOML3Q8TAV4 291 aa8.26□□□□□ -1.09
PDPN-203ENST00000376061 P2RX4Q99571 388 aa8.26□□□□□ -1.09
PDPN-203ENST00000376061 ATP5SQ99766 215 aa8.26□□□□□ -1.09
PDPN-203ENST00000376061 GON7Q9BXV9 100 aa8.26□□□□□ -1.09
PDPN-203ENST00000376061 PARP11Q9NR21 331 aa8.26□□□□□ -1.09
PDPN-203ENST00000376061 NSD1Q96L73 2696 aaPredicted RBP8.26□□□□□ -1.09
PDPN-203ENST00000376061 CYSRT1A8MQ03 144 aa8.25□□□□□ -1.09
PDPN-203ENST00000376061 ATP6V0E1O15342 81 aa8.25□□□□□ -1.09
PDPN-203ENST00000376061 MFAP2P55001 183 aa8.25□□□□□ -1.09
PDPN-203ENST00000376061 ATP5IP56385 69 aaPredicted RBP8.25□□□□□ -1.09
PDPN-203ENST00000376061 RAB11AP62491 216 aa8.25□□□□□ -1.09
PDPN-203ENST00000376061 UBA52P62987 128 aaKnown RBP8.25□□□□□ -1.09
PDPN-203ENST00000376061 ASPHD1Q5U4P2 390 aa8.25□□□□□ -1.09
PDPN-203ENST00000376061 PVRIGQ6DKI7 326 aa8.25□□□□□ -1.09
PDPN-203ENST00000376061 ETV3LQ6ZN32 361 aa8.25□□□□□ -1.09
PDPN-203ENST00000376061 C19orf35Q6ZS72 473 aa8.25□□□□□ -1.09
PDPN-203ENST00000376061 OR10P1Q8NGE3 313 aa8.25□□□□□ -1.09
PDPN-203ENST00000376061 ST8SIA2Q92186 375 aa8.25□□□□□ -1.09
PDPN-203ENST00000376061 SLA2Q9H6Q3 261 aa8.25□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms