RNA–Protein interactions for RNA: ENST00000375850.3

C9orf47-202, Transcript of chromosome 9 open reading frame 47, humanhuman

APPRIS ALT2 TSL 3 BASIC

Gene C9orf47, Length 859 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf47-202ENST00000375850 EWSR1Q01844 656 aaKnown RBP eCLIP17.16■□□□□ 0.34
C9orf47-202ENST00000375850 OR1P1Q8NH06 330 aa17.16■□□□□ 0.34
C9orf47-202ENST00000375850 GATAD1Q8WUU5 269 aa17.16■□□□□ 0.34
C9orf47-202ENST00000375850 FAM212BQ9NTI7 297 aaPredicted RBP17.16■□□□□ 0.34
C9orf47-202ENST00000375850 SMPXQ9UHP9 88 aa17.16■□□□□ 0.34
C9orf47-202ENST00000375850 F8W735 103 aaPredicted RBP17.15■□□□□ 0.34
C9orf47-202ENST00000375850 NUPL2O15504 423 aaKnown RBP17.15■□□□□ 0.34
C9orf47-202ENST00000375850 KRASP01116 189 aa17.15■□□□□ 0.34
C9orf47-202ENST00000375850 CD5P06127 495 aa17.15■□□□□ 0.34
C9orf47-202ENST00000375850 FCER2P06734 321 aa17.15■□□□□ 0.34
C9orf47-202ENST00000375850 CTSDP07339 412 aaPredicted RBP17.15■□□□□ 0.34
C9orf47-202ENST00000375850 FCGR2BP31994 310 aaPredicted RBP17.15■□□□□ 0.34
C9orf47-202ENST00000375850 ADMP35318 185 aa17.15■□□□□ 0.34
C9orf47-202ENST00000375850 LPAR6P43657 344 aa17.15■□□□□ 0.34
C9orf47-202ENST00000375850 MFAP2P55001 183 aa17.15■□□□□ 0.34
C9orf47-202ENST00000375850 UBAC2Q8NBM4 344 aa17.15■□□□□ 0.34
C9orf47-202ENST00000375850 FCAMRQ8WWV6 532 aa17.15■□□□□ 0.34
C9orf47-202ENST00000375850 TXN2Q99757 166 aa17.15■□□□□ 0.34
C9orf47-202ENST00000375850 ZNF2Q9BSG1 426 aaPredicted RBP17.15■□□□□ 0.34
C9orf47-202ENST00000375850 ANAPC10Q9UM13 185 aa17.15■□□□□ 0.34
C9orf47-202ENST00000375850 RPL35AP18077 110 aaKnown RBP17.14■□□□□ 0.33
C9orf47-202ENST00000375850 S100GP29377 79 aa17.14■□□□□ 0.33
C9orf47-202ENST00000375850 CMTM3Q96MX0 182 aa17.14■□□□□ 0.33
C9orf47-202ENST00000375850 IGHV7-4-1A0A0J9YVY3 117 aa17.13■□□□□ 0.33
C9orf47-202ENST00000375850 GPR31O00270 319 aa17.13■□□□□ 0.33
C9orf47-202ENST00000375850 CTSGP08311 255 aa17.13■□□□□ 0.33
C9orf47-202ENST00000375850 OR5H2Q8NGV7 314 aa17.13■□□□□ 0.33
C9orf47-202ENST00000375850 OR6F1Q8NGZ6 308 aa17.13■□□□□ 0.33
C9orf47-202ENST00000375850 OR10C1Q96KK4 312 aa17.13■□□□□ 0.33
C9orf47-202ENST00000375850 MFFQ9GZY8 342 aa17.13■□□□□ 0.33
C9orf47-202ENST00000375850 CSTL1Q9H114 145 aa17.13■□□□□ 0.33
C9orf47-202ENST00000375850 RNF167Q9H6Y7 350 aa17.13■□□□□ 0.33
C9orf47-202ENST00000375850 TMEM14BQ9NUH8 114 aa17.13■□□□□ 0.33
C9orf47-202ENST00000375850 MPTX1A8MV57 137 aa17.12■□□□□ 0.33
C9orf47-202ENST00000375850 NAT1P18440 290 aa17.12■□□□□ 0.33
C9orf47-202ENST00000375850 G6PCP35575 357 aa17.12■□□□□ 0.33
C9orf47-202ENST00000375850 RFX2P48378 723 aa17.12■□□□□ 0.33
C9orf47-202ENST00000375850 MFAP4P55083 255 aa17.12■□□□□ 0.33
C9orf47-202ENST00000375850 UBE2NLQ5JXB2 153 aa17.12■□□□□ 0.33
C9orf47-202ENST00000375850 LGALS9CQ6DKI2 356 aa17.12■□□□□ 0.33
C9orf47-202ENST00000375850 LPCAT3Q6P1A2 487 aa17.12■□□□□ 0.33
C9orf47-202ENST00000375850 TMEM116Q8NCL8 245 aa17.12■□□□□ 0.33
C9orf47-202ENST00000375850 PHLDA1Q8WV24 401 aaPredicted RBP17.12■□□□□ 0.33
C9orf47-202ENST00000375850 RHPN1-AS1Q9BWJ2 59 aa17.12■□□□□ 0.33
C9orf47-202ENST00000375850 IGHV3-21A0A0B4J1V1 117 aa17.11■□□□□ 0.33
C9orf47-202ENST00000375850 MEIS3P1A6NDR6 274 aa17.11■□□□□ 0.33
C9orf47-202ENST00000375850 C15orf61A6NNL5 157 aa17.11■□□□□ 0.33
C9orf47-202ENST00000375850 CHEK1O14757 476 aa17.11■□□□□ 0.33
C9orf47-202ENST00000375850 TMEM69Q5SWH9 247 aa17.11■□□□□ 0.33
C9orf47-202ENST00000375850 RNF2Q99496 336 aa17.11■□□□□ 0.33
C9orf47-202ENST00000375850 NSG2Q9Y328 171 aa17.11■□□□□ 0.33
C9orf47-202ENST00000375850 ZNF207O43670 478 aaKnown RBP17.1■□□□□ 0.33
C9orf47-202ENST00000375850 PAFAH1B2P68402 229 aa17.1■□□□□ 0.33
C9orf47-202ENST00000375850 ZNF114Q8NC26 417 aa17.1■□□□□ 0.33
C9orf47-202ENST00000375850 GINS3Q9BRX5 216 aa17.1■□□□□ 0.33
C9orf47-202ENST00000375850 TRAV14DV4A0A0A6YYC5 116 aa17.09■□□□□ 0.33
C9orf47-202ENST00000375850 YIF1AO95070 293 aa17.09■□□□□ 0.33
C9orf47-202ENST00000375850 PMP2P02689 132 aa17.09■□□□□ 0.33
C9orf47-202ENST00000375850 RARRES2Q99969 163 aa17.09■□□□□ 0.33
C9orf47-202ENST00000375850 NXF2Q9GZY0 626 aaKnown RBP17.09■□□□□ 0.33
C9orf47-202ENST00000375850 C11orf68Q9H3H3 251 aaKnown RBP17.09■□□□□ 0.33
C9orf47-202ENST00000375850 IGHV3OR16-8A0A075B7F1 116 aa17.08■□□□□ 0.32
C9orf47-202ENST00000375850 I3L2K1 104 aa17.08■□□□□ 0.32
C9orf47-202ENST00000375850 PRSS3P35030 304 aa17.08■□□□□ 0.32
C9orf47-202ENST00000375850 TAS2R20P59543 309 aa17.08■□□□□ 0.32
C9orf47-202ENST00000375850 APRG1Q8IVJ8 170 aa17.08■□□□□ 0.32
C9orf47-202ENST00000375850 SLC25A46Q96AG3 418 aa17.08■□□□□ 0.32
C9orf47-202ENST00000375850 FXYD6Q9H0Q3 95 aa17.08■□□□□ 0.32
C9orf47-202ENST00000375850 EIF4EP06730 217 aaKnown RBP17.07■□□□□ 0.32
C9orf47-202ENST00000375850 TCTAP57738 103 aa17.07■□□□□ 0.32
C9orf47-202ENST00000375850 FAM90A2PQ658T7 463 aa17.07■□□□□ 0.32
C9orf47-202ENST00000375850 OR4A16Q8NH70 328 aa17.07■□□□□ 0.32
C9orf47-202ENST00000375850 MISP3Q96FF7 219 aa17.07■□□□□ 0.32
C9orf47-202ENST00000375850 DFFBO76075 338 aa17.06■□□□□ 0.32
C9orf47-202ENST00000375850 IFNA4P05014 189 aa17.06■□□□□ 0.32
C9orf47-202ENST00000375850 ERHP84090 104 aaKnown RBP17.06■□□□□ 0.32
C9orf47-202ENST00000375850 PRCDQ00LT1 54 aa17.06■□□□□ 0.32
C9orf47-202ENST00000375850 NEDD8Q15843 81 aa17.06■□□□□ 0.32
C9orf47-202ENST00000375850 H2BFWTQ7Z2G1 175 aa17.06■□□□□ 0.32
C9orf47-202ENST00000375850 SAMD12Q8N8I0 201 aa17.06■□□□□ 0.32
C9orf47-202ENST00000375850 C11orf45Q8TAV5 145 aa17.06■□□□□ 0.32
C9orf47-202ENST00000375850 TRAV2A0A0B4J234 112 aa17.05■□□□□ 0.32
C9orf47-202ENST00000375850 GNG7O60262 68 aa17.05■□□□□ 0.32
C9orf47-202ENST00000375850 ATP6V1G2O95670 118 aa17.05■□□□□ 0.32
C9orf47-202ENST00000375850 HRH1P35367 487 aa17.05■□□□□ 0.32
C9orf47-202ENST00000375850 TSPAN5P62079 268 aa17.05■□□□□ 0.32
C9orf47-202ENST00000375850 KCTD21Q4G0X4 260 aa17.05■□□□□ 0.32
C9orf47-202ENST00000375850 SEC22AQ96IW7 307 aa17.05■□□□□ 0.32
C9orf47-202ENST00000375850 DBX1A6NMT0 343 aa17.04■□□□□ 0.32
C9orf47-202ENST00000375850 MT-CO2P00403 227 aa17.04■□□□□ 0.32
C9orf47-202ENST00000375850 NPBWR1P48145 328 aa17.04■□□□□ 0.32
C9orf47-202ENST00000375850 TFPI2P48307 235 aa17.04■□□□□ 0.32
C9orf47-202ENST00000375850 HSPE1P61604 102 aaKnown RBP17.04■□□□□ 0.32
C9orf47-202ENST00000375850 RBMS2Q15434 407 aaKnown RBP17.04■□□□□ 0.32
C9orf47-202ENST00000375850 RPP25LQ8N5L8 163 aaKnown RBP17.04■□□□□ 0.32
C9orf47-202ENST00000375850 OR11H2Q8NH07 326 aa17.04■□□□□ 0.32
C9orf47-202ENST00000375850 ZNF414Q96IQ9 312 aa17.04■□□□□ 0.32
C9orf47-202ENST00000375850 UCP3P55916 312 aa17.03■□□□□ 0.32
C9orf47-202ENST00000375850 PHLDA2Q53GA4 152 aa17.03■□□□□ 0.32
C9orf47-202ENST00000375850 TCF24Q7RTU0 167 aa17.03■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms