RNA–Protein interactions for RNA: ENST00000375703.7

MSH5-201, Transcript of mutS homolog 5, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MSH5, Length 2,708 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-201ENST00000375703 CMTM2Q8TAZ6 248 aa11.89□□□□□ -0.51
MSH5-201ENST00000375703 TECRQ9NZ01 308 aaKnown RBP11.89□□□□□ -0.51
MSH5-201ENST00000375703 NAGKQ9UJ70 344 aa11.89□□□□□ -0.51
MSH5-201ENST00000375703 IGKV1OR2-108A0A075B7D4 117 aa11.88□□□□□ -0.51
MSH5-201ENST00000375703 TM4SF5O14894 197 aa11.88□□□□□ -0.51
MSH5-201ENST00000375703 CEACAM4O75871 244 aa11.88□□□□□ -0.51
MSH5-201ENST00000375703 TNFSF4P23510 183 aa11.88□□□□□ -0.51
MSH5-201ENST00000375703 OR10J1P30954 320 aa11.88□□□□□ -0.51
MSH5-201ENST00000375703 GNG4P50150 75 aa11.88□□□□□ -0.51
MSH5-201ENST00000375703 LGALS4P56470 323 aa11.88□□□□□ -0.51
MSH5-201ENST00000375703 MLANAQ16655 118 aa11.88□□□□□ -0.51
MSH5-201ENST00000375703 MMD2Q8IY49 270 aa11.88□□□□□ -0.51
MSH5-201ENST00000375703 OR1L6Q8NGR2 347 aa11.88□□□□□ -0.51
MSH5-201ENST00000375703 SNRNP40Q96DI7 357 aaKnown RBP11.88□□□□□ -0.51
MSH5-201ENST00000375703 LINC00574Q9H8X3 128 aa11.88□□□□□ -0.51
MSH5-201ENST00000375703 ZNRD1Q9P1U0 126 aa11.88□□□□□ -0.51
MSH5-201ENST00000375703 RPUSD1Q9UJJ7 312 aaKnown RBP11.88□□□□□ -0.51
MSH5-201ENST00000375703 DSCAMO60469 2012 aa11.88□□□□□ -0.51
MSH5-201ENST00000375703 CADP27708 2225 aa11.88□□□□□ -0.51
MSH5-201ENST00000375703 CRISP2P16562 243 aa11.88□□□□□ -0.51
MSH5-201ENST00000375703 ARL2-SNX15V9GYD0 113 aa11.88□□□□□ -0.51
MSH5-201ENST00000375703 FCN1O00602 326 aa11.88□□□□□ -0.51
MSH5-201ENST00000375703 OR7C2O60412 319 aa11.88□□□□□ -0.51
MSH5-201ENST00000375703 IRF2P14316 349 aa11.88□□□□□ -0.51
MSH5-201ENST00000375703 IER3P46695 156 aa11.88□□□□□ -0.51
MSH5-201ENST00000375703 KRTCAP3Q53RY4 240 aa11.88□□□□□ -0.51
MSH5-201ENST00000375703 C2orf83Q53S99 150 aa11.88□□□□□ -0.51
MSH5-201ENST00000375703 PQLC2Q6ZP29 291 aa11.88□□□□□ -0.51
MSH5-201ENST00000375703 RND1Q92730 232 aa11.88□□□□□ -0.51
MSH5-201ENST00000375703 SLC35E1Q96K37 410 aa11.88□□□□□ -0.51
MSH5-201ENST00000375703 V9GYV3 84 aa11.88□□□□□ -0.51
MSH5-201ENST00000375703 FAM27E3Q08E93 113 aa11.87□□□□□ -0.51
MSH5-201ENST00000375703 CENPWQ5EE01 88 aa11.87□□□□□ -0.51
MSH5-201ENST00000375703 C1orf185Q5T7R7 199 aa11.87□□□□□ -0.51
MSH5-201ENST00000375703 C22orf34Q6ZV56 151 aa11.87□□□□□ -0.51
MSH5-201ENST00000375703 ZNF503Q96F45 646 aa11.87□□□□□ -0.51
MSH5-201ENST00000375703 TP53TG3Q9ULZ0 132 aa11.87□□□□□ -0.51
MSH5-201ENST00000375703 SVILO95425 2214 aa11.87□□□□□ -0.51
MSH5-201ENST00000375703 hADV38S2A0JD32 116 aa11.87□□□□□ -0.51
MSH5-201ENST00000375703 ZNF705FA8MVS1 300 aaPredicted RBP11.87□□□□□ -0.51
MSH5-201ENST00000375703 ZNF705DP0CH99 300 aaPredicted RBP11.87□□□□□ -0.51
MSH5-201ENST00000375703 ZNF705BP0CI00 300 aaPredicted RBP11.87□□□□□ -0.51
MSH5-201ENST00000375703 ATP5IP56385 69 aaPredicted RBP11.87□□□□□ -0.51
MSH5-201ENST00000375703 TPPP2P59282 170 aa11.87□□□□□ -0.51
MSH5-201ENST00000375703 PAFAH1B2P68402 229 aa11.87□□□□□ -0.51
MSH5-201ENST00000375703 OR8I2Q8N0Y5 310 aa11.87□□□□□ -0.51
MSH5-201ENST00000375703 POLR3KQ9Y2Y1 108 aaPredicted RBP11.87□□□□□ -0.51
MSH5-201ENST00000375703 FRMD6-AS1P0C7T7 363 aa11.86□□□□□ -0.51
MSH5-201ENST00000375703 SAA1P0DJI8 122 aaPredicted RBP11.86□□□□□ -0.51
MSH5-201ENST00000375703 TAS2R45P59539 299 aa11.86□□□□□ -0.51
MSH5-201ENST00000375703 SUMO1P63165 101 aaKnown RBP11.86□□□□□ -0.51
MSH5-201ENST00000375703 TMEM30BQ3MIR4 351 aa11.86□□□□□ -0.51
MSH5-201ENST00000375703 C1orf194Q5T5A4 169 aa11.86□□□□□ -0.51
MSH5-201ENST00000375703 OR10W1Q8NGF6 305 aa11.86□□□□□ -0.51
MSH5-201ENST00000375703 C19orf24Q9BVV8 132 aa11.86□□□□□ -0.51
MSH5-201ENST00000375703 BET1LQ9NYM9 111 aa11.86□□□□□ -0.51
MSH5-201ENST00000375703 ASPMQ8IZT6 3477 aa11.86□□□□□ -0.51
MSH5-201ENST00000375703 SNURFLB1AK76 121 aa11.86□□□□□ -0.51
MSH5-201ENST00000375703 OR10J4P0C629 311 aa11.86□□□□□ -0.51
MSH5-201ENST00000375703 RNASE2P10153 161 aaKnown RBP11.86□□□□□ -0.51
MSH5-201ENST00000375703 DOLPP1Q86YN1 238 aa11.86□□□□□ -0.51
MSH5-201ENST00000375703 OR5B3Q8NH48 314 aa11.86□□□□□ -0.51
MSH5-201ENST00000375703 OR9G1Q8NH87 305 aa11.86□□□□□ -0.51
MSH5-201ENST00000375703 TMEM106BQ9NUM4 274 aa11.86□□□□□ -0.51
MSH5-201ENST00000375703 CD33P20138 364 aa11.85□□□□□ -0.51
MSH5-201ENST00000375703 CD40P25942 277 aa11.85□□□□□ -0.51
MSH5-201ENST00000375703 TIGITQ495A1 244 aa11.85□□□□□ -0.51
MSH5-201ENST00000375703 BAGE3Q86Y29 109 aa11.85□□□□□ -0.51
MSH5-201ENST00000375703 BAGE2Q86Y30 109 aa11.85□□□□□ -0.51
MSH5-201ENST00000375703 OR1L8Q8NGR8 309 aa11.85□□□□□ -0.51
MSH5-201ENST00000375703 TBX15Q96SF7 602 aa11.85□□□□□ -0.51
MSH5-201ENST00000375703 PARD6AQ9NPB6 346 aa11.85□□□□□ -0.51
MSH5-201ENST00000375703 PPP1R14DQ9NXH3 145 aa11.85□□□□□ -0.51
MSH5-201ENST00000375703 ZFHX4Q86UP3 3567 aa11.85□□□□□ -0.51
MSH5-201ENST00000375703 BDP1A6H8Y1 2624 aa11.85□□□□□ -0.51
MSH5-201ENST00000375703 SERF1AO75920 110 aa11.85□□□□□ -0.51
MSH5-201ENST00000375703 OR5G3P0C626 314 aa11.85□□□□□ -0.51
MSH5-201ENST00000375703 CCL8P80075 99 aa11.85□□□□□ -0.51
MSH5-201ENST00000375703 ANKRD39Q53RE8 183 aa11.85□□□□□ -0.51
MSH5-201ENST00000375703 RNASE7Q9H1E1 156 aaKnown RBP11.85□□□□□ -0.51
MSH5-201ENST00000375703 LINC00312Q9Y6C7 94 aa11.85□□□□□ -0.51
MSH5-201ENST00000375703 TCAPO15273 167 aa11.84□□□□□ -0.51
MSH5-201ENST00000375703 C8orf88P0DMB2 117 aa11.84□□□□□ -0.51
MSH5-201ENST00000375703 LINC00310P59036 64 aa11.84□□□□□ -0.51
MSH5-201ENST00000375703 RANP62826 216 aaKnown RBP11.84□□□□□ -0.51
MSH5-201ENST00000375703 RPL19P84098 196 aaKnown RBP11.84□□□□□ -0.51
MSH5-201ENST00000375703 CD69Q07108 199 aa11.84□□□□□ -0.51
MSH5-201ENST00000375703 TEX36Q5VZQ5 186 aa11.84□□□□□ -0.51
MSH5-201ENST00000375703 IGFL3Q6UXB1 125 aa11.84□□□□□ -0.51
MSH5-201ENST00000375703 PNKDQ8N490 385 aa11.84□□□□□ -0.51
MSH5-201ENST00000375703 SLC25A33Q9BSK2 321 aa11.84□□□□□ -0.51
MSH5-201ENST00000375703 GNB1LQ9BYB4 327 aa11.84□□□□□ -0.51
MSH5-201ENST00000375703 COMMD5Q9GZQ3 224 aa11.84□□□□□ -0.51
MSH5-201ENST00000375703 CFAP47Q6ZTR5 3102 aa11.84□□□□□ -0.51
MSH5-201ENST00000375703 SPINK4O60575 86 aa11.84□□□□□ -0.51
MSH5-201ENST00000375703 ESDP10768 282 aa11.84□□□□□ -0.51
MSH5-201ENST00000375703 ERHP84090 104 aaKnown RBP11.84□□□□□ -0.51
MSH5-201ENST00000375703 Q6ZWC4 215 aa11.84□□□□□ -0.51
MSH5-201ENST00000375703 TGIF2LXQ8IUE1 241 aa11.84□□□□□ -0.51
MSH5-201ENST00000375703 ST6GALNAC3Q8NDV1 305 aa11.84□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms