RNA–Protein interactions for RNA: ENST00000375427.4

SCN2A-202, Transcript of sodium voltage-gated channel alpha subunit 2, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCN2A, Length 8,553 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN2A-202ENST00000375427 DOCK1Q14185 1865 aa5.08□□□□□ -1.6
SCN2A-202ENST00000375427 IGHV3-64DA0A0J9YX35 117 aa5.08□□□□□ -1.6
SCN2A-202ENST00000375427 C9orf118A6NHY6 69 aa5.08□□□□□ -1.6
SCN2A-202ENST00000375427 SPRY3O43610 288 aa5.08□□□□□ -1.6
SCN2A-202ENST00000375427 COL9A1P20849 921 aa5.08□□□□□ -1.6
SCN2A-202ENST00000375427 EFNB1P98172 346 aa5.08□□□□□ -1.6
SCN2A-202ENST00000375427 SIGLEC8Q9NYZ4 499 aa5.08□□□□□ -1.6
SCN2A-202ENST00000375427 LOC102723996A0A087X1L8 192 aa5.08□□□□□ -1.6
SCN2A-202ENST00000375427 MUC21A0A0G2JKD1 596 aa5.08□□□□□ -1.6
SCN2A-202ENST00000375427 MUC21A0A140T8X8 626 aa5.08□□□□□ -1.6
SCN2A-202ENST00000375427 CD52P31358 61 aa5.08□□□□□ -1.6
SCN2A-202ENST00000375427 MUC21Q5SSG8 566 aa5.08□□□□□ -1.6
SCN2A-202ENST00000375427 SCAMP4Q969E2 229 aa5.08□□□□□ -1.6
SCN2A-202ENST00000375427 ZNF608Q9ULD9 1512 aaPredicted RBP5.08□□□□□ -1.6
SCN2A-202ENST00000375427 FAM236DA0A1B0GTK5 79 aa5.08□□□□□ -1.6
SCN2A-202ENST00000375427 F2Z2F3 143 aa5.08□□□□□ -1.6
SCN2A-202ENST00000375427 FAM236CP0DP71 79 aa5.08□□□□□ -1.6
SCN2A-202ENST00000375427 ZNF750Q32MQ0 723 aa5.08□□□□□ -1.6
SCN2A-202ENST00000375427 TMEM254Q8TBM7 123 aa5.08□□□□□ -1.6
SCN2A-202ENST00000375427 GDF15Q99988 308 aa5.08□□□□□ -1.6
SCN2A-202ENST00000375427 PDFQ9HBH1 243 aa5.08□□□□□ -1.6
SCN2A-202ENST00000375427 TCRBV7S3A2A0A539 114 aa5.07□□□□□ -1.6
SCN2A-202ENST00000375427 SIGLEC14Q08ET2 396 aa5.07□□□□□ -1.6
SCN2A-202ENST00000375427 UBE2DNLQ8IWF7 75 aa5.07□□□□□ -1.6
SCN2A-202ENST00000375427 CHCHD5Q9BSY4 110 aa5.07□□□□□ -1.6
SCN2A-202ENST00000375427 TIMM21Q9BVV7 248 aa5.07□□□□□ -1.6
SCN2A-202ENST00000375427 HEXA-AS1Q9H8Q6 139 aa5.07□□□□□ -1.6
SCN2A-202ENST00000375427 H0YL77 283 aa5.07□□□□□ -1.6
SCN2A-202ENST00000375427 RHODO00212 210 aa5.07□□□□□ -1.6
SCN2A-202ENST00000375427 SPRY1O43609 319 aaPredicted RBP5.07□□□□□ -1.6
SCN2A-202ENST00000375427 WNT1P04628 370 aa5.07□□□□□ -1.6
SCN2A-202ENST00000375427 PRIMA1Q86XR5 153 aa5.07□□□□□ -1.6
SCN2A-202ENST00000375427 LILRA2Q8N149 483 aa5.07□□□□□ -1.6
SCN2A-202ENST00000375427 KREMEN2Q8NCW0 462 aa5.07□□□□□ -1.6
SCN2A-202ENST00000375427 DNAJC19Q96DA6 116 aa5.07□□□□□ -1.6
SCN2A-202ENST00000375427 EAF1Q96JC9 268 aaPredicted RBP5.07□□□□□ -1.6
SCN2A-202ENST00000375427 VSTM2LQ96N03 204 aa5.07□□□□□ -1.6
SCN2A-202ENST00000375427 SARGQ9BW04 601 aa5.07□□□□□ -1.6
SCN2A-202ENST00000375427 A0A0U1RQV5 110 aa5.07□□□□□ -1.6
SCN2A-202ENST00000375427 HLA-DMBP28068 263 aa5.07□□□□□ -1.6
SCN2A-202ENST00000375427 PYY3Q5JQD4 70 aa5.07□□□□□ -1.6
SCN2A-202ENST00000375427 TP53INP2Q8IXH6 220 aa5.07□□□□□ -1.6
SCN2A-202ENST00000375427 IGHV3-9P01782 118 aa5.07□□□□□ -1.6
SCN2A-202ENST00000375427 HEPN1Q6WQI6 88 aa5.07□□□□□ -1.6
SCN2A-202ENST00000375427 DEFB125Q8N687 156 aa5.07□□□□□ -1.6
SCN2A-202ENST00000375427 IGKV5-2P06315 115 aa5.07□□□□□ -1.6
SCN2A-202ENST00000375427 RPL27AP46776 148 aaKnown RBP5.07□□□□□ -1.6
SCN2A-202ENST00000375427 ERCC8Q13216 396 aa5.07□□□□□ -1.6
SCN2A-202ENST00000375427 CDCP2Q5VXM1 449 aa5.07□□□□□ -1.6
SCN2A-202ENST00000375427 MORN5Q5VZ52 161 aa5.07□□□□□ -1.6
SCN2A-202ENST00000375427 ZNF329Q86UD4 541 aa5.07□□□□□ -1.6
SCN2A-202ENST00000375427 hCG_38984A0A1B0GV85 526 aa5.07□□□□□ -1.6
SCN2A-202ENST00000375427 TIMP1P01033 207 aa5.07□□□□□ -1.6
SCN2A-202ENST00000375427 Q6ZS52 159 aa5.07□□□□□ -1.6
SCN2A-202ENST00000375427 ST8SIA1Q92185 356 aa5.07□□□□□ -1.6
SCN2A-202ENST00000375427 MVB12AQ96EY5 273 aa5.07□□□□□ -1.6
SCN2A-202ENST00000375427 MS4A8Q9BY19 250 aa5.07□□□□□ -1.6
SCN2A-202ENST00000375427 RNF39Q9H2S5 420 aa5.07□□□□□ -1.6
SCN2A-202ENST00000375427 ORMDL1Q9P0S3 153 aa5.07□□□□□ -1.6
SCN2A-202ENST00000375427 PHRF1Q9P1Y6 1649 aaKnown RBP5.07□□□□□ -1.6
SCN2A-202ENST00000375427 MANSC4A6NHS7 340 aaPredicted RBP5.07□□□□□ -1.6
SCN2A-202ENST00000375427 NPIPB13A6NJU9 1138 aa5.07□□□□□ -1.6
SCN2A-202ENST00000375427 NPIPB5A8MRT5 1133 aa5.07□□□□□ -1.6
SCN2A-202ENST00000375427 TISP43B9A030 160 aa5.07□□□□□ -1.6
SCN2A-202ENST00000375427 EDIL3O43854 480 aa5.07□□□□□ -1.6
SCN2A-202ENST00000375427 APELAP0DMC3 54 aa5.07□□□□□ -1.6
SCN2A-202ENST00000375427 IGFBP2P18065 325 aa5.07□□□□□ -1.6
SCN2A-202ENST00000375427 FGF9P31371 208 aaPredicted RBP5.07□□□□□ -1.6
SCN2A-202ENST00000375427 EMDP50402 254 aa5.07□□□□□ -1.6
SCN2A-202ENST00000375427 KLK9Q9UKQ9 250 aa5.07□□□□□ -1.6
SCN2A-202ENST00000375427 PRDM15P57071 1507 aaPredicted RBP5.07□□□□□ -1.6
SCN2A-202ENST00000375427 PPYP01298 95 aa5.06□□□□□ -1.6
SCN2A-202ENST00000375427 NPPCP23582 126 aa5.06□□□□□ -1.6
SCN2A-202ENST00000375427 ANXA2RQ3ZCQ2 193 aa5.06□□□□□ -1.6
SCN2A-202ENST00000375427 PLPPR2Q96GM1 343 aa5.06□□□□□ -1.6
SCN2A-202ENST00000375427 FGF6P10767 208 aa5.06□□□□□ -1.6
SCN2A-202ENST00000375427 ZNF32P17041 273 aa5.06□□□□□ -1.6
SCN2A-202ENST00000375427 CLDN10P78369 228 aa5.06□□□□□ -1.6
SCN2A-202ENST00000375427 Q6ZVL8 140 aa5.06□□□□□ -1.6
SCN2A-202ENST00000375427 WFDC12Q8WWY7 111 aa5.06□□□□□ -1.6
SCN2A-202ENST00000375427 LINC01587Q99440 93 aa5.06□□□□□ -1.6
SCN2A-202ENST00000375427 CFHR5Q9BXR6 569 aa5.06□□□□□ -1.6
SCN2A-202ENST00000375427 CRIM1Q9NZV1 1036 aa5.06□□□□□ -1.6
SCN2A-202ENST00000375427 LY96Q9Y6Y9 160 aa5.06□□□□□ -1.6
SCN2A-202ENST00000375427 DLC1Q96QB1 1528 aa5.06□□□□□ -1.6
SCN2A-202ENST00000375427 A0A096LPE4 126 aa5.06□□□□□ -1.6
SCN2A-202ENST00000375427 A0A1W2PPZ6 126 aa5.06□□□□□ -1.6
SCN2A-202ENST00000375427 TIMM23O14925 209 aa5.06□□□□□ -1.6
SCN2A-202ENST00000375427 GCHFRP30047 84 aa5.06□□□□□ -1.6
SCN2A-202ENST00000375427 TMEM187Q14656 261 aa5.06□□□□□ -1.6
SCN2A-202ENST00000375427 SS18Q15532 418 aa5.06□□□□□ -1.6
SCN2A-202ENST00000375427 CXCL17Q6UXB2 119 aa5.06□□□□□ -1.6
SCN2A-202ENST00000375427 CARD19Q96LW7 228 aa5.06□□□□□ -1.6
SCN2A-202ENST00000375427 NAA38Q9BRA0 125 aaKnown RBP5.06□□□□□ -1.6
SCN2A-202ENST00000375427 CLEC7AQ9BXN2 247 aa5.06□□□□□ -1.6
SCN2A-202ENST00000375427 COLQQ9Y215 455 aaPredicted RBP5.06□□□□□ -1.6
SCN2A-202ENST00000375427 ZNF462Q96JM2 2506 aa5.06□□□□□ -1.6
SCN2A-202ENST00000375427 A0A1W2PRU2 124 aa5.06□□□□□ -1.6
SCN2A-202ENST00000375427 PFN1P07737 140 aaKnown RBP5.06□□□□□ -1.6
SCN2A-202ENST00000375427 COX6A1P12074 109 aa5.06□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 68.7 ms