RNA–Protein interactions for RNA: ENST00000375340.10

SMC1A-202, Transcript of structural maintenance of chromosomes 1A, humanhuman

TSL 1 (best) BASIC

Gene SMC1A, Length 9,930 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-202ENST00000375340 NAPSAO96009 420 aa5.47□□□□□ -1.53
SMC1A-202ENST00000375340 SP9P0CG40 484 aa5.47□□□□□ -1.53
SMC1A-202ENST00000375340 GOLT1AQ6ZVE7 132 aa5.47□□□□□ -1.53
SMC1A-202ENST00000375340 FDCSPQ8NFU4 85 aa5.47□□□□□ -1.53
SMC1A-202ENST00000375340 DOCK8Q8NF50 2099 aa5.47□□□□□ -1.53
SMC1A-202ENST00000375340 TRAV5A0A0B4J249 113 aa5.47□□□□□ -1.53
SMC1A-202ENST00000375340 NMSQ5H8A3 153 aa5.47□□□□□ -1.53
SMC1A-202ENST00000375340 C9orf106Q8NAJ2 232 aa5.47□□□□□ -1.53
SMC1A-202ENST00000375340 ZNF738Q8NE65 137 aa5.47□□□□□ -1.53
SMC1A-202ENST00000375340 MGST2Q99735 147 aa5.47□□□□□ -1.53
SMC1A-202ENST00000375340 FCGR2BP31994 310 aaPredicted RBP5.46□□□□□ -1.53
SMC1A-202ENST00000375340 ID3Q02535 119 aa5.46□□□□□ -1.53
SMC1A-202ENST00000375340 PYY3Q5JQD4 70 aa5.46□□□□□ -1.53
SMC1A-202ENST00000375340 ASPHD1Q5U4P2 390 aa5.46□□□□□ -1.53
SMC1A-202ENST00000375340 Q6ZT83 130 aa5.46□□□□□ -1.53
SMC1A-202ENST00000375340 NDUFA2O43678 99 aa5.46□□□□□ -1.53
SMC1A-202ENST00000375340 TRBV9A0A0B4J1U6 114 aa5.46□□□□□ -1.54
SMC1A-202ENST00000375340 A6NDN8 102 aa5.46□□□□□ -1.54
SMC1A-202ENST00000375340 FBLL1A6NHQ2 334 aaKnown RBP5.46□□□□□ -1.54
SMC1A-202ENST00000375340 CORTO00230 105 aa5.46□□□□□ -1.54
SMC1A-202ENST00000375340 C10orf91Q5T1B1 145 aa5.46□□□□□ -1.54
SMC1A-202ENST00000375340 WFDC3Q8IUB2 231 aa5.46□□□□□ -1.54
SMC1A-202ENST00000375340 SRSF12Q8WXF0 261 aaKnown RBP5.46□□□□□ -1.54
SMC1A-202ENST00000375340 TFPI2P48307 235 aa5.46□□□□□ -1.54
SMC1A-202ENST00000375340 B3GALT5-AS1P59052 145 aa5.46□□□□□ -1.54
SMC1A-202ENST00000375340 CDPF1Q6NVV7 123 aa5.46□□□□□ -1.54
SMC1A-202ENST00000375340 NBASA2RRP1 2371 aa5.46□□□□□ -1.54
SMC1A-202ENST00000375340 LNP1A1A4G5 178 aa5.46□□□□□ -1.54
SMC1A-202ENST00000375340 MT-ND6P03923 174 aa5.46□□□□□ -1.54
SMC1A-202ENST00000375340 PYYP10082 97 aa5.46□□□□□ -1.54
SMC1A-202ENST00000375340 COX19Q49B96 90 aa5.46□□□□□ -1.54
SMC1A-202ENST00000375340 CRIM1Q9NZV1 1036 aa5.46□□□□□ -1.54
SMC1A-202ENST00000375340 DPRXA6NFQ7 191 aa5.46□□□□□ -1.54
SMC1A-202ENST00000375340 GOSR1O95249 250 aa5.46□□□□□ -1.54
SMC1A-202ENST00000375340 H3BVH4 76 aa5.46□□□□□ -1.54
SMC1A-202ENST00000375340 RPL27AP46776 148 aaKnown RBP5.46□□□□□ -1.54
SMC1A-202ENST00000375340 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa5.46□□□□□ -1.54
SMC1A-202ENST00000375340 OCC1Q8TAD7 63 aa5.46□□□□□ -1.54
SMC1A-202ENST00000375340 TMUB1Q9BVT8 246 aa5.46□□□□□ -1.54
SMC1A-202ENST00000375340 PEX7O00628 323 aa5.46□□□□□ -1.54
SMC1A-202ENST00000375340 OR10W1Q8NGF6 305 aa5.46□□□□□ -1.54
SMC1A-202ENST00000375340 ZFP30Q9Y2G7 519 aa5.46□□□□□ -1.54
SMC1A-202ENST00000375340 ACACAQ13085 2346 aa5.46□□□□□ -1.54
SMC1A-202ENST00000375340 MUC22E2RYF6 1773 aaPredicted RBP5.46□□□□□ -1.54
SMC1A-202ENST00000375340 LEPROTL1O95214 131 aa5.45□□□□□ -1.54
SMC1A-202ENST00000375340 SAA1P0DJI8 122 aaPredicted RBP5.45□□□□□ -1.54
SMC1A-202ENST00000375340 FAM53AQ6NSI3 398 aaPredicted RBP5.45□□□□□ -1.54
SMC1A-202ENST00000375340 GUCD1Q96NT3 240 aa5.45□□□□□ -1.54
SMC1A-202ENST00000375340 ASCL2Q99929 193 aa5.45□□□□□ -1.54
SMC1A-202ENST00000375340 IFI27L2Q9H2X8 130 aa5.45□□□□□ -1.54
SMC1A-202ENST00000375340 LOC102723996A0A087X1L8 192 aa5.45□□□□□ -1.54
SMC1A-202ENST00000375340 TIMP3P35625 211 aa5.45□□□□□ -1.54
SMC1A-202ENST00000375340 MIEN1Q9BRT3 115 aa5.45□□□□□ -1.54
SMC1A-202ENST00000375340 RAB1BQ9H0U4 201 aa5.45□□□□□ -1.54
SMC1A-202ENST00000375340 SPSB3Q6PJ21 355 aa5.45□□□□□ -1.54
SMC1A-202ENST00000375340 TMEM256Q8N2U0 113 aa5.45□□□□□ -1.54
SMC1A-202ENST00000375340 NRN1Q9NPD7 142 aa5.45□□□□□ -1.54
SMC1A-202ENST00000375340 IZUMO1RA6ND01 250 aa5.45□□□□□ -1.54
SMC1A-202ENST00000375340 HBBP68871 147 aa5.45□□□□□ -1.54
SMC1A-202ENST00000375340 MORN2Q502X0 79 aa5.45□□□□□ -1.54
SMC1A-202ENST00000375340 MRPL32Q9BYC8 188 aaKnown RBP5.45□□□□□ -1.54
SMC1A-202ENST00000375340 CDC42EP3Q9UKI2 254 aa5.45□□□□□ -1.54
SMC1A-202ENST00000375340 ADAMTS9Q9P2N4 1935 aa5.45□□□□□ -1.54
SMC1A-202ENST00000375340 IGKV1-6A0A0C4DH72 117 aa5.45□□□□□ -1.54
SMC1A-202ENST00000375340 C9orf172C9J069 976 aa5.45□□□□□ -1.54
SMC1A-202ENST00000375340 LGALS7P47929 136 aa5.45□□□□□ -1.54
SMC1A-202ENST00000375340 ANAPC10Q9UM13 185 aa5.45□□□□□ -1.54
SMC1A-202ENST00000375340 SHANK1Q9Y566 2161 aa5.45□□□□□ -1.54
SMC1A-202ENST00000375340 IGHV3OR16-8A0A075B7F1 116 aa5.45□□□□□ -1.54
SMC1A-202ENST00000375340 A8MWL6 223 aa5.45□□□□□ -1.54
SMC1A-202ENST00000375340 HTN1P15515 57 aa5.45□□□□□ -1.54
SMC1A-202ENST00000375340 LCN2P80188 198 aa5.45□□□□□ -1.54
SMC1A-202ENST00000375340 Q6P435 159 aa5.45□□□□□ -1.54
SMC1A-202ENST00000375340 DNM1P46Q6ZS02 220 aa5.45□□□□□ -1.54
SMC1A-202ENST00000375340 WDR31Q8NA23 367 aa5.45□□□□□ -1.54
SMC1A-202ENST00000375340 C1orf147Q96MC9 270 aaPredicted RBP5.45□□□□□ -1.54
SMC1A-202ENST00000375340 PMCHL2Q9BQD1 86 aa5.45□□□□□ -1.54
SMC1A-202ENST00000375340 CACNA1GO43497 2377 aa5.45□□□□□ -1.54
SMC1A-202ENST00000375340 FOXF2Q12947 444 aa5.45□□□□□ -1.54
SMC1A-202ENST00000375340 Q6ZRM9 215 aa5.45□□□□□ -1.54
SMC1A-202ENST00000375340 PTPRSQ13332 1948 aa5.44□□□□□ -1.54
SMC1A-202ENST00000375340 YLPM1P49750 1951 aaKnown RBP5.44□□□□□ -1.54
SMC1A-202ENST00000375340 TMEM265A0A087WTH1 108 aa5.44□□□□□ -1.54
SMC1A-202ENST00000375340 KBTBD11-OT1A0A1B0GTJ5 212 aa5.44□□□□□ -1.54
SMC1A-202ENST00000375340 C15orf61A6NNL5 157 aa5.44□□□□□ -1.54
SMC1A-202ENST00000375340 LINC00473A8K010 186 aa5.44□□□□□ -1.54
SMC1A-202ENST00000375340 F2RL2O00254 374 aa5.44□□□□□ -1.54
SMC1A-202ENST00000375340 FAM27E3Q08E93 113 aa5.44□□□□□ -1.54
SMC1A-202ENST00000375340 TBR1Q16650 682 aa5.44□□□□□ -1.54
SMC1A-202ENST00000375340 CD177Q8N6Q3 437 aa5.44□□□□□ -1.54
SMC1A-202ENST00000375340 STXBP6Q8NFX7 210 aa5.44□□□□□ -1.54
SMC1A-202ENST00000375340 SELLP14151 372 aa5.44□□□□□ -1.54
SMC1A-202ENST00000375340 CDKN1AP38936 164 aa5.44□□□□□ -1.54
SMC1A-202ENST00000375340 EFNB3Q15768 340 aa5.44□□□□□ -1.54
SMC1A-202ENST00000375340 NRN1LQ496H8 165 aa5.44□□□□□ -1.54
SMC1A-202ENST00000375340 TM4SF20Q53R12 229 aa5.44□□□□□ -1.54
SMC1A-202ENST00000375340 WNK2Q9Y3S1 2297 aa5.44□□□□□ -1.54
SMC1A-202ENST00000375340 IGHV1-18A0A0C4DH31 117 aa5.44□□□□□ -1.54
SMC1A-202ENST00000375340 IGHV3-35A0A0C4DH35 117 aa5.44□□□□□ -1.54
SMC1A-202ENST00000375340 C7orf71A4D174 169 aa5.44□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms