RNA–Protein interactions for RNA: ENST00000375271.4

PTCH1-202, Transcript of patched 1, humanhuman

TSL 1 (best)

Gene PTCH1, Length 1,058 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-202ENST00000375271 FKBP11Q9NYL4 201 aa10.36□□□□□ -0.75
PTCH1-202ENST00000375271 DAPK2Q9UIK4 370 aa10.36□□□□□ -0.75
PTCH1-202ENST00000375271 OR51B2Q9Y5P1 312 aa10.36□□□□□ -0.75
PTCH1-202ENST00000375271 TEX50A0A1B0GTY4 177 aa10.35□□□□□ -0.75
PTCH1-202ENST00000375271 MARCH11A6NNE9 402 aa10.35□□□□□ -0.75
PTCH1-202ENST00000375271 ST8SIA3O43173 380 aa10.35□□□□□ -0.75
PTCH1-202ENST00000375271 MFAP4P55083 255 aa10.35□□□□□ -0.75
PTCH1-202ENST00000375271 WT1-ASQ06250 92 aa10.35□□□□□ -0.75
PTCH1-202ENST00000375271 TBCEQ15813 527 aaPredicted RBP10.35□□□□□ -0.75
PTCH1-202ENST00000375271 TCF24Q7RTU0 167 aa10.35□□□□□ -0.75
PTCH1-202ENST00000375271 GVQW1Q8N7I0 195 aa10.35□□□□□ -0.75
PTCH1-202ENST00000375271 TMEM231Q9H6L2 316 aa10.35□□□□□ -0.75
PTCH1-202ENST00000375271 ETV7Q9Y603 341 aa10.35□□□□□ -0.75
PTCH1-202ENST00000375271 DNAH10Q8IVF4 4471 aa10.35□□□□□ -0.75
PTCH1-202ENST00000375271 IGHV3OR16-13A0A075B7E8 117 aa10.34□□□□□ -0.75
PTCH1-202ENST00000375271 IGHV3-74A0A0B4J1X5 117 aa10.34□□□□□ -0.75
PTCH1-202ENST00000375271 TRAV10A0A0B4J240 114 aa10.34□□□□□ -0.75
PTCH1-202ENST00000375271 GNG7O60262 68 aa10.34□□□□□ -0.75
PTCH1-202ENST00000375271 DFFBO76075 338 aa10.34□□□□□ -0.75
PTCH1-202ENST00000375271 TMEM41BQ5BJD5 291 aa10.34□□□□□ -0.75
PTCH1-202ENST00000375271 ZNF773Q6PK81 442 aa10.34□□□□□ -0.75
PTCH1-202ENST00000375271 SLC25A46Q96AG3 418 aa10.34□□□□□ -0.75
PTCH1-202ENST00000375271 TSC22D3Q99576 134 aa10.34□□□□□ -0.75
PTCH1-202ENST00000375271 IFT46Q9NQC8 304 aa10.34□□□□□ -0.75
PTCH1-202ENST00000375271 RHBDL2Q9NX52 303 aa10.34□□□□□ -0.75
PTCH1-202ENST00000375271 RABAC1Q9UI14 185 aa10.34□□□□□ -0.75
PTCH1-202ENST00000375271 PRNDQ9UKY0 176 aa10.34□□□□□ -0.75
PTCH1-202ENST00000375271 TRAV18A0A075B6X5 111 aa10.33□□□□□ -0.76
PTCH1-202ENST00000375271 C15orf61A6NNL5 157 aa10.33□□□□□ -0.76
PTCH1-202ENST00000375271 SSX5O60225 188 aa10.33□□□□□ -0.76
PTCH1-202ENST00000375271 KRASP01116 189 aa10.33□□□□□ -0.76
PTCH1-202ENST00000375271 RLN1P04808 185 aa10.33□□□□□ -0.76
PTCH1-202ENST00000375271 MED14OSP0DP75 135 aa10.33□□□□□ -0.76
PTCH1-202ENST00000375271 S100GP29377 79 aa10.33□□□□□ -0.76
PTCH1-202ENST00000375271 DEFB131AP59861 70 aa10.33□□□□□ -0.76
PTCH1-202ENST00000375271 LEMD1Q68G75 181 aa10.33□□□□□ -0.76
PTCH1-202ENST00000375271 ZNF818PQ6ZRF7 136 aa10.33□□□□□ -0.76
PTCH1-202ENST00000375271 CMTM1Q8IZ96 169 aa10.33□□□□□ -0.76
PTCH1-202ENST00000375271 LGALS14Q8TCE9 139 aa10.33□□□□□ -0.76
PTCH1-202ENST00000375271 GIMAP1Q8WWP7 306 aa10.33□□□□□ -0.76
PTCH1-202ENST00000375271 HRH4Q9H3N8 390 aa10.33□□□□□ -0.76
PTCH1-202ENST00000375271 NDUFA4L2Q9NRX3 87 aa10.33□□□□□ -0.76
PTCH1-202ENST00000375271 APLNQ9ULZ1 77 aa10.33□□□□□ -0.76
PTCH1-202ENST00000375271 RRP15Q9Y3B9 282 aaKnown RBP10.33□□□□□ -0.76
PTCH1-202ENST00000375271 IGHV4-4A0A075B6R2 117 aa10.32□□□□□ -0.76
PTCH1-202ENST00000375271 K7EIM0 57 aa10.32□□□□□ -0.76
PTCH1-202ENST00000375271 SCGB2A1O75556 95 aa10.32□□□□□ -0.76
PTCH1-202ENST00000375271 FCER2P06734 321 aa10.32□□□□□ -0.76
PTCH1-202ENST00000375271 PTHLHP12272 177 aa10.32□□□□□ -0.76
PTCH1-202ENST00000375271 MIFP14174 115 aa10.32□□□□□ -0.76
PTCH1-202ENST00000375271 HLA-DMBP28068 263 aa10.32□□□□□ -0.76
PTCH1-202ENST00000375271 CBX5P45973 191 aa10.32□□□□□ -0.76
PTCH1-202ENST00000375271 AQP4P55087 323 aa10.32□□□□□ -0.76
PTCH1-202ENST00000375271 HOGA1Q86XE5 327 aa10.32□□□□□ -0.76
PTCH1-202ENST00000375271 OR1P1Q8NH06 330 aa10.32□□□□□ -0.76
PTCH1-202ENST00000375271 PINX1Q96BK5 328 aaKnown RBP10.32□□□□□ -0.76
PTCH1-202ENST00000375271 DGCR14Q96DF8 476 aaKnown RBP10.32□□□□□ -0.76
PTCH1-202ENST00000375271 NARS2Q96I59 477 aaKnown RBP10.32□□□□□ -0.76
PTCH1-202ENST00000375271 TXN2Q99757 166 aa10.32□□□□□ -0.76
PTCH1-202ENST00000375271 DIABLOQ9NR28 239 aa10.32□□□□□ -0.76
PTCH1-202ENST00000375271 NSG2Q9Y328 171 aa10.32□□□□□ -0.76
PTCH1-202ENST00000375271 CTSGP08311 255 aa10.31□□□□□ -0.76
PTCH1-202ENST00000375271 P0DMU3 169 aa10.31□□□□□ -0.76
PTCH1-202ENST00000375271 FAM231AP0DMU4 169 aa10.31□□□□□ -0.76
PTCH1-202ENST00000375271 FAM231CP0DMU5 169 aa10.31□□□□□ -0.76
PTCH1-202ENST00000375271 F2RP25116 425 aa10.31□□□□□ -0.76
PTCH1-202ENST00000375271 G6PCP35575 357 aa10.31□□□□□ -0.76
PTCH1-202ENST00000375271 LPAR6P43657 344 aa10.31□□□□□ -0.76
PTCH1-202ENST00000375271 PVRIGQ6DKI7 326 aa10.31□□□□□ -0.76
PTCH1-202ENST00000375271 DUSP18Q8NEJ0 188 aa10.31□□□□□ -0.76
PTCH1-202ENST00000375271 OR5AP2Q8NGF4 316 aa10.31□□□□□ -0.76
PTCH1-202ENST00000375271 MOB3AQ96BX8 217 aa10.31□□□□□ -0.76
PTCH1-202ENST00000375271 OR10C1Q96KK4 312 aa10.31□□□□□ -0.76
PTCH1-202ENST00000375271 MS4A6AQ9H2W1 248 aa10.31□□□□□ -0.76
PTCH1-202ENST00000375271 VCX3BQ9H321 246 aa10.31□□□□□ -0.76
PTCH1-202ENST00000375271 EHFQ9NZC4 300 aa10.31□□□□□ -0.76
PTCH1-202ENST00000375271 SSR3Q9UNL2 185 aa10.31□□□□□ -0.76
PTCH1-202ENST00000375271 IGHV4-28A0A0C4DH34 117 aa10.3□□□□□ -0.76
PTCH1-202ENST00000375271 PRSS29PA6NIE9 313 aa10.3□□□□□ -0.76
PTCH1-202ENST00000375271 SPP1P10451 314 aa10.3□□□□□ -0.76
PTCH1-202ENST00000375271 NPBWR1P48145 328 aa10.3□□□□□ -0.76
PTCH1-202ENST00000375271 SFXN4Q6P4A7 337 aa10.3□□□□□ -0.76
PTCH1-202ENST00000375271 MORN3Q6PF18 240 aaPredicted RBP10.3□□□□□ -0.76
PTCH1-202ENST00000375271 Q6ZTC4 211 aa10.3□□□□□ -0.76
PTCH1-202ENST00000375271 OR4A16Q8NH70 328 aa10.3□□□□□ -0.76
PTCH1-202ENST00000375271 NXF2Q9GZY0 626 aaKnown RBP10.3□□□□□ -0.76
PTCH1-202ENST00000375271 KIAA1109Q2LD37 5005 aa10.29□□□□□ -0.76
PTCH1-202ENST00000375271 A0A0A6YYH2 397 aa10.29□□□□□ -0.76
PTCH1-202ENST00000375271 IGHV3-66A0A0C4DH42 116 aa10.29□□□□□ -0.76
PTCH1-202ENST00000375271 A0A1W2PS18 150 aa10.29□□□□□ -0.76
PTCH1-202ENST00000375271 A6NJ64 397 aa10.29□□□□□ -0.76
PTCH1-202ENST00000375271 F8W735 103 aaPredicted RBP10.29□□□□□ -0.76
PTCH1-202ENST00000375271 MT-CO2P00403 227 aa10.29□□□□□ -0.76
PTCH1-202ENST00000375271 PSMB9P28065 219 aa10.29□□□□□ -0.76
PTCH1-202ENST00000375271 ERHP84090 104 aaKnown RBP10.29□□□□□ -0.76
PTCH1-202ENST00000375271 Q8NAQ8 132 aa10.29□□□□□ -0.76
PTCH1-202ENST00000375271 STXBP6Q8NFX7 210 aa10.29□□□□□ -0.76
PTCH1-202ENST00000375271 ST8SIA2Q92186 375 aa10.29□□□□□ -0.76
PTCH1-202ENST00000375271 CNBD2Q96M20 576 aa10.29□□□□□ -0.76
PTCH1-202ENST00000375271 NDUFAF3Q9BU61 184 aa10.29□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms