RNA–Protein interactions for RNA: ENST00000375218.3

UBR4-201, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 2 BASIC

Gene UBR4, Length 4,031 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-201ENST00000375218 CLEC12BQ2HXU8 276 aa7.35□□□□□ -1.23
UBR4-201ENST00000375218 TMEM255AQ5JRV8 349 aa7.35□□□□□ -1.23
UBR4-201ENST00000375218 LCN10Q6JVE6 187 aa7.35□□□□□ -1.23
UBR4-201ENST00000375218 OR4K13Q8NH42 304 aa7.35□□□□□ -1.23
UBR4-201ENST00000375218 DNAJC27Q9NZQ0 273 aa7.35□□□□□ -1.23
UBR4-201ENST00000375218 GON4LQ3T8J9 2241 aa7.34□□□□□ -1.23
UBR4-201ENST00000375218 MT-ND6P03923 174 aa7.34□□□□□ -1.23
UBR4-201ENST00000375218 GLI4P10075 376 aa7.34□□□□□ -1.23
UBR4-201ENST00000375218 RND3P61587 244 aa7.34□□□□□ -1.23
UBR4-201ENST00000375218 LAGE3Q14657 143 aa7.34□□□□□ -1.23
UBR4-201ENST00000375218 RAB42Q8N4Z0 105 aa7.34□□□□□ -1.23
UBR4-201ENST00000375218 WFDC11Q8NEX6 87 aa7.34□□□□□ -1.23
UBR4-201ENST00000375218 IGHV1-69-2A0A0G2JMI3 117 aa7.34□□□□□ -1.23
UBR4-201ENST00000375218 RBMY1BA6NDE4 496 aaKnown RBP7.34□□□□□ -1.23
UBR4-201ENST00000375218 RBMY1EA6NEQ0 496 aaKnown RBP7.34□□□□□ -1.23
UBR4-201ENST00000375218 RBMY1DP0C7P1 496 aaKnown RBP7.34□□□□□ -1.23
UBR4-201ENST00000375218 RBMY1A1P0DJD3 496 aaKnown RBP7.34□□□□□ -1.23
UBR4-201ENST00000375218 IL9P15248 144 aa7.34□□□□□ -1.23
UBR4-201ENST00000375218 ALG10Q5BKT4 473 aa7.34□□□□□ -1.23
UBR4-201ENST00000375218 ZNF793Q6ZN11 406 aa7.34□□□□□ -1.23
UBR4-201ENST00000375218 HMGN2P46Q86SG4 172 aa7.34□□□□□ -1.23
UBR4-201ENST00000375218 ZNF709Q8N972 641 aa7.34□□□□□ -1.23
UBR4-201ENST00000375218 Q8TCH9 128 aa7.34□□□□□ -1.23
UBR4-201ENST00000375218 MCHR1Q99705 422 aa7.34□□□□□ -1.23
UBR4-201ENST00000375218 C6orf106Q9H6K1 298 aaPredicted RBP7.34□□□□□ -1.23
UBR4-201ENST00000375218 TUBA4BQ9H853 241 aa7.34□□□□□ -1.23
UBR4-201ENST00000375218 NINQ8N4C6 2090 aa7.34□□□□□ -1.23
UBR4-201ENST00000375218 SNURFLB1AK76 121 aa7.34□□□□□ -1.24
UBR4-201ENST00000375218 ADAT3Q96EY9 351 aaPredicted RBP7.34□□□□□ -1.24
UBR4-201ENST00000375218 FGF22Q9HCT0 170 aa7.34□□□□□ -1.24
UBR4-201ENST00000375218 TMED7-TICAM2A0A0A6YYA0 188 aa7.33□□□□□ -1.24
UBR4-201ENST00000375218 ADCYAP1P18509 176 aa7.33□□□□□ -1.24
UBR4-201ENST00000375218 GLIPR1P48060 266 aa7.33□□□□□ -1.24
UBR4-201ENST00000375218 CRISP3P54108 245 aa7.33□□□□□ -1.24
UBR4-201ENST00000375218 DAZ2Q13117 558 aaKnown RBP7.33□□□□□ -1.24
UBR4-201ENST00000375218 DGAT2L6Q6ZPD8 337 aa7.33□□□□□ -1.24
UBR4-201ENST00000375218 DAZ4Q86SG3 579 aaKnown RBP7.33□□□□□ -1.24
UBR4-201ENST00000375218 TRPT1Q86TN4 253 aaKnown RBP7.33□□□□□ -1.24
UBR4-201ENST00000375218 DAZ1Q9NQZ3 744 aaKnown RBP7.33□□□□□ -1.24
UBR4-201ENST00000375218 DAZ3Q9NR90 486 aaKnown RBP7.33□□□□□ -1.24
UBR4-201ENST00000375218 TCRBV3S1A0A5B6 114 aa7.33□□□□□ -1.24
UBR4-201ENST00000375218 C5orf63A6NC05 138 aa7.33□□□□□ -1.24
UBR4-201ENST00000375218 J3QQQ9 107 aa7.33□□□□□ -1.24
UBR4-201ENST00000375218 REM1O75628 298 aa7.33□□□□□ -1.24
UBR4-201ENST00000375218 AIFM1O95831 613 aa7.33□□□□□ -1.24
UBR4-201ENST00000375218 MT-ATP8P03928 68 aa7.33□□□□□ -1.24
UBR4-201ENST00000375218 FKBP2P26885 142 aaKnown RBP7.33□□□□□ -1.24
UBR4-201ENST00000375218 CTRLP40313 264 aa7.33□□□□□ -1.24
UBR4-201ENST00000375218 ATP5G3P48201 142 aa7.33□□□□□ -1.24
UBR4-201ENST00000375218 FUT5Q11128 374 aa7.33□□□□□ -1.24
UBR4-201ENST00000375218 NIPSNAP3BQ9BS92 247 aa7.33□□□□□ -1.24
UBR4-201ENST00000375218 TRIAP1O43715 76 aa7.33□□□□□ -1.24
UBR4-201ENST00000375218 GPR137BO60478 399 aa7.33□□□□□ -1.24
UBR4-201ENST00000375218 NPIPB7O75200 414 aa7.33□□□□□ -1.24
UBR4-201ENST00000375218 IFITM1P13164 125 aa7.33□□□□□ -1.24
UBR4-201ENST00000375218 PPP1CCP36873 323 aaKnown RBP7.33□□□□□ -1.24
UBR4-201ENST00000375218 IL15RAQ13261 267 aa7.33□□□□□ -1.24
UBR4-201ENST00000375218 C1orf189Q5VU69 101 aa7.33□□□□□ -1.24
UBR4-201ENST00000375218 LCN12Q6JVE5 192 aa7.33□□□□□ -1.24
UBR4-201ENST00000375218 BORCS8Q96FH0 119 aa7.33□□□□□ -1.24
UBR4-201ENST00000375218 OR10A2Q9H208 303 aa7.33□□□□□ -1.24
UBR4-201ENST00000375218 PXMP4Q9Y6I8 212 aa7.33□□□□□ -1.24
UBR4-201ENST00000375218 TRAV26-2A0A0B4J265 109 aa7.32□□□□□ -1.24
UBR4-201ENST00000375218 MLANAQ16655 118 aa7.32□□□□□ -1.24
UBR4-201ENST00000375218 CENPWQ5EE01 88 aa7.32□□□□□ -1.24
UBR4-201ENST00000375218 TSPO2Q5TGU0 170 aa7.32□□□□□ -1.24
UBR4-201ENST00000375218 FXYD5Q96DB9 178 aa7.32□□□□□ -1.24
UBR4-201ENST00000375218 SELENOKQ9Y6D0 94 aa7.32□□□□□ -1.24
UBR4-201ENST00000375218 H0YJW9 148 aa7.32□□□□□ -1.24
UBR4-201ENST00000375218 CRLF1O75462 422 aa7.32□□□□□ -1.24
UBR4-201ENST00000375218 ELOCQ15369 112 aa7.32□□□□□ -1.24
UBR4-201ENST00000375218 MSMO1Q15800 293 aa7.32□□□□□ -1.24
UBR4-201ENST00000375218 LINC01587Q99440 93 aa7.32□□□□□ -1.24
UBR4-201ENST00000375218 ZNF318Q5VUA4 2279 aa7.32□□□□□ -1.24
UBR4-201ENST00000375218 SPAG17Q6Q759 2223 aa7.32□□□□□ -1.24
UBR4-201ENST00000375218 LY6G6EA0A0G2JKS1 128 aa7.32□□□□□ -1.24
UBR4-201ENST00000375218 PAX4O43316 350 aa7.32□□□□□ -1.24
UBR4-201ENST00000375218 HERVK_113P63121 156 aa7.32□□□□□ -1.24
UBR4-201ENST00000375218 AADACL3Q5VUY0 350 aa7.32□□□□□ -1.24
UBR4-201ENST00000375218 TMEM183AQ8IXX5 376 aa7.32□□□□□ -1.24
UBR4-201ENST00000375218 TTC9CQ8N5M4 171 aa7.32□□□□□ -1.24
UBR4-201ENST00000375218 SUMF1Q8NBK3 374 aa7.32□□□□□ -1.24
UBR4-201ENST00000375218 OR2T35Q8NGX2 323 aa7.32□□□□□ -1.24
UBR4-201ENST00000375218 SLC25A46Q96AG3 418 aa7.32□□□□□ -1.24
UBR4-201ENST00000375218 ZNF837Q96EG3 531 aaPredicted RBP7.32□□□□□ -1.24
UBR4-201ENST00000375218 FUT9Q9Y231 359 aa7.32□□□□□ -1.24
UBR4-201ENST00000375218 ZNF256Q9Y2P7 627 aaPredicted RBP7.32□□□□□ -1.24
UBR4-201ENST00000375218 U3KQA8 63 aa7.32□□□□□ -1.24
UBR4-201ENST00000375218 GGT3PA6NGU5 568 aa7.31□□□□□ -1.24
UBR4-201ENST00000375218 KNCNA6PVL3 124 aa7.31□□□□□ -1.24
UBR4-201ENST00000375218 LYPD3O95274 346 aa7.31□□□□□ -1.24
UBR4-201ENST00000375218 CLDN14O95500 239 aa7.31□□□□□ -1.24
UBR4-201ENST00000375218 ZNF506Q5JVG8 444 aa7.31□□□□□ -1.24
UBR4-201ENST00000375218 ZNF880Q6PDB4 577 aa7.31□□□□□ -1.24
UBR4-201ENST00000375218 OR51T1Q8NGJ9 327 aa7.31□□□□□ -1.24
UBR4-201ENST00000375218 OR5D16Q8NGK9 328 aa7.31□□□□□ -1.24
UBR4-201ENST00000375218 GPHA2Q96T91 129 aa7.31□□□□□ -1.24
UBR4-201ENST00000375218 SAMD10Q9BYL1 202 aa7.31□□□□□ -1.24
UBR4-201ENST00000375218 IGLV3-19P01714 112 aa7.31□□□□□ -1.24
UBR4-201ENST00000375218 COX5AP20674 150 aa7.31□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms