RNA–Protein interactions for RNA: ENST00000374730.2

USP48-202, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 4

Gene USP48, Length 570 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-202ENST00000374730 FZR1Q9UM11 496 aa3.89□□□□□ -1.79
USP48-202ENST00000374730 DYSFO75923 2080 aa3.89□□□□□ -1.79
USP48-202ENST00000374730 ASPMQ8IZT6 3477 aa3.89□□□□□ -1.79
USP48-202ENST00000374730 ACACBO00763 2458 aa3.88□□□□□ -1.79
USP48-202ENST00000374730 CTXND1A0A1B0GTU2 59 aa3.88□□□□□ -1.79
USP48-202ENST00000374730 A0A1B0GV50 99 aa3.88□□□□□ -1.79
USP48-202ENST00000374730 MAP1LC3B2A6NCE7 125 aa3.88□□□□□ -1.79
USP48-202ENST00000374730 B4DEV8 164 aa3.88□□□□□ -1.79
USP48-202ENST00000374730 M0R1B8 84 aa3.88□□□□□ -1.79
USP48-202ENST00000374730 TIMM23O14925 209 aa3.88□□□□□ -1.79
USP48-202ENST00000374730 HPRT1P00492 218 aa3.88□□□□□ -1.79
USP48-202ENST00000374730 KRASP01116 189 aa3.88□□□□□ -1.79
USP48-202ENST00000374730 TFF1P04155 84 aa3.88□□□□□ -1.79
USP48-202ENST00000374730 ARG1P05089 322 aa3.88□□□□□ -1.79
USP48-202ENST00000374730 CGB3P0DN86 165 aa3.88□□□□□ -1.79
USP48-202ENST00000374730 CGB7P0DN87 165 aa3.88□□□□□ -1.79
USP48-202ENST00000374730 RAB5AP20339 215 aa3.88□□□□□ -1.79
USP48-202ENST00000374730 EDN2P20800 178 aa3.88□□□□□ -1.79
USP48-202ENST00000374730 MDKP21741 143 aaPredicted RBP3.88□□□□□ -1.79
USP48-202ENST00000374730 G6PCP35575 357 aa3.88□□□□□ -1.79
USP48-202ENST00000374730 NBL1P41271 181 aa3.88□□□□□ -1.79
USP48-202ENST00000374730 AKR1C3P42330 323 aa3.88□□□□□ -1.79
USP48-202ENST00000374730 RAB7AP51149 207 aa3.88□□□□□ -1.79
USP48-202ENST00000374730 GNB2P62879 340 aa3.88□□□□□ -1.79
USP48-202ENST00000374730 EDDM3AQ14507 147 aa3.88□□□□□ -1.79
USP48-202ENST00000374730 MORN2Q502X0 79 aa3.88□□□□□ -1.79
USP48-202ENST00000374730 OR2B11Q5JQS5 317 aa3.88□□□□□ -1.79
USP48-202ENST00000374730 STUMQ69YW2 141 aa3.88□□□□□ -1.79
USP48-202ENST00000374730 FAM53AQ6NSI3 398 aaPredicted RBP3.88□□□□□ -1.79
USP48-202ENST00000374730 BTNL3Q6UXE8 466 aa3.88□□□□□ -1.79
USP48-202ENST00000374730 SSX8Q7RTT4 187 aa3.88□□□□□ -1.79
USP48-202ENST00000374730 H2BFWTQ7Z2G1 175 aa3.88□□□□□ -1.79
USP48-202ENST00000374730 ZNF429Q86V71 674 aa3.88□□□□□ -1.79
USP48-202ENST00000374730 LRP11Q86VZ4 500 aa3.88□□□□□ -1.79
USP48-202ENST00000374730 TPRX1Q8N7U7 411 aa3.88□□□□□ -1.79
USP48-202ENST00000374730 CYB561D1Q8N8Q1 229 aa3.88□□□□□ -1.79
USP48-202ENST00000374730 ZNF114Q8NC26 417 aa3.88□□□□□ -1.79
USP48-202ENST00000374730 ZNF436-AS1Q8NC38 126 aaPredicted RBP3.88□□□□□ -1.79
USP48-202ENST00000374730 PRSS33Q8NF86 280 aa3.88□□□□□ -1.79
USP48-202ENST00000374730 NUP37Q8NFH4 326 aa3.88□□□□□ -1.79
USP48-202ENST00000374730 OR52E5Q8NH55 327 aa3.88□□□□□ -1.79
USP48-202ENST00000374730 OCC1Q8TAD7 63 aa3.88□□□□□ -1.79
USP48-202ENST00000374730 DTD1Q8TEA8 209 aa3.88□□□□□ -1.79
USP48-202ENST00000374730 CA5BP1Q8WTZ4 195 aa3.88□□□□□ -1.79
USP48-202ENST00000374730 RAB39BQ96DA2 213 aa3.88□□□□□ -1.79
USP48-202ENST00000374730 SNRNP40Q96DI7 357 aaKnown RBP3.88□□□□□ -1.79
USP48-202ENST00000374730 OR2V2Q96R30 315 aa3.88□□□□□ -1.79
USP48-202ENST00000374730 NIPSNAP3BQ9BS92 247 aa3.88□□□□□ -1.79
USP48-202ENST00000374730 C20orf24Q9BUV8 137 aa3.88□□□□□ -1.79
USP48-202ENST00000374730 MAP1LC3BQ9GZQ8 125 aa3.88□□□□□ -1.79
USP48-202ENST00000374730 IFI27L2Q9H2X8 130 aa3.88□□□□□ -1.79
USP48-202ENST00000374730 ESRP2Q9H6T0 727 aaKnown RBP3.88□□□□□ -1.79
USP48-202ENST00000374730 ZNF665Q9H7R5 613 aa3.88□□□□□ -1.79
USP48-202ENST00000374730 LINC00574Q9H8X3 128 aa3.88□□□□□ -1.79
USP48-202ENST00000374730 CALYQ9NYX4 217 aa3.88□□□□□ -1.79
USP48-202ENST00000374730 GNG12Q9UBI6 72 aa3.88□□□□□ -1.79
USP48-202ENST00000374730 VAX2Q9UIW0 290 aa3.88□□□□□ -1.79
USP48-202ENST00000374730 PSG11Q9UQ72 335 aa3.88□□□□□ -1.79
USP48-202ENST00000374730 PAM16Q9Y3D7 125 aa3.88□□□□□ -1.79
USP48-202ENST00000374730 LSM4Q9Y4Z0 139 aaKnown RBP3.88□□□□□ -1.79
USP48-202ENST00000374730 PUS1Q9Y606 427 aaKnown RBP eCLIP3.88□□□□□ -1.79
USP48-202ENST00000374730 MGAQ8IWI9 3026 aa3.88□□□□□ -1.79
USP48-202ENST00000374730 ZGRF1Q86YA3 2104 aa3.88□□□□□ -1.79
USP48-202ENST00000374730 USP24Q9UPU5 2620 aa3.88□□□□□ -1.79
USP48-202ENST00000374730 CEP250Q9BV73 2442 aa3.87□□□□□ -1.79
USP48-202ENST00000374730 PTPRZ1P23471 2315 aaPredicted RBP3.87□□□□□ -1.79
USP48-202ENST00000374730 IGHV3-43A0A0B4J1X8 118 aa3.87□□□□□ -1.79
USP48-202ENST00000374730 TRGV8A0A0C4DH27 118 aa3.87□□□□□ -1.79
USP48-202ENST00000374730 ZNF98A6NK75 572 aa3.87□□□□□ -1.79
USP48-202ENST00000374730 C15orf62A8K5M9 175 aa3.87□□□□□ -1.79
USP48-202ENST00000374730 CEBPZOSA8MTT3 80 aa3.87□□□□□ -1.79
USP48-202ENST00000374730 SEC14L6B5MCN3 397 aa3.87□□□□□ -1.79
USP48-202ENST00000374730 C17orf112F2Z3M2 114 aa3.87□□□□□ -1.79
USP48-202ENST00000374730 ZG16O60844 167 aa3.87□□□□□ -1.79
USP48-202ENST00000374730 MPDU1O75352 247 aa3.87□□□□□ -1.79
USP48-202ENST00000374730 GAGE7O76087 117 aa3.87□□□□□ -1.79
USP48-202ENST00000374730 IGKV1D-33P01593 117 aa3.87□□□□□ -1.79
USP48-202ENST00000374730 IGKV1-33P01594 117 aa3.87□□□□□ -1.79
USP48-202ENST00000374730 IGHV2-5P01817 119 aa3.87□□□□□ -1.79
USP48-202ENST00000374730 OR9G9P0C7N8 305 aa3.87□□□□□ -1.79
USP48-202ENST00000374730 GAGE12FP0CL80 117 aa3.87□□□□□ -1.79
USP48-202ENST00000374730 GAGE12GP0CL81 117 aa3.87□□□□□ -1.79
USP48-202ENST00000374730 GAGE12IP0CL82 117 aa3.87□□□□□ -1.79
USP48-202ENST00000374730 IGHV3-43DP0DP04 118 aa3.87□□□□□ -1.79
USP48-202ENST00000374730 IGHV4-30-4P0DP06 118 aa3.87□□□□□ -1.79
USP48-202ENST00000374730 NQO2P16083 231 aa3.87□□□□□ -1.79
USP48-202ENST00000374730 SRD5A1P18405 259 aa3.87□□□□□ -1.79
USP48-202ENST00000374730 FGF7P21781 194 aa3.87□□□□□ -1.79
USP48-202ENST00000374730 TDGF1P3P51864 188 aa3.87□□□□□ -1.79
USP48-202ENST00000374730 SPCS3P61009 180 aa3.87□□□□□ -1.79
USP48-202ENST00000374730 DLK1P80370 383 aa3.87□□□□□ -1.79
USP48-202ENST00000374730 GAGE1Q13065 139 aa3.87□□□□□ -1.79
USP48-202ENST00000374730 GAGE4Q13068 117 aa3.87□□□□□ -1.79
USP48-202ENST00000374730 GAMTQ14353 236 aa3.87□□□□□ -1.79
USP48-202ENST00000374730 POU2AF1Q16633 256 aa3.87□□□□□ -1.79
USP48-202ENST00000374730 C17orf58Q2M2W7 97 aa3.87□□□□□ -1.79
USP48-202ENST00000374730 TMEM249Q2WGJ8 235 aa3.87□□□□□ -1.79
USP48-202ENST00000374730 AKIRIN2Q53H80 203 aa3.87□□□□□ -1.79
USP48-202ENST00000374730 TEX36Q5VZQ5 186 aa3.87□□□□□ -1.79
USP48-202ENST00000374730 NCR3LG1Q68D85 454 aa3.87□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 54.5 ms