RNA–Protein interactions for RNA: ENST00000374487.6

HMGCL-202, Transcript of 3-hydroxy-3-methylglutaryl-CoA lyase, humanhuman

TSL 2

Gene HMGCL, Length 2,151 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCL-202ENST00000374487 OR5B3Q8NH48 314 aa9.83□□□□□ -0.84
HMGCL-202ENST00000374487 NEIL1Q96FI4 390 aaPredicted RBP9.83□□□□□ -0.84
HMGCL-202ENST00000374487 COMMD5Q9GZQ3 224 aa9.83□□□□□ -0.84
HMGCL-202ENST00000374487 PARLQ9H300 379 aa9.83□□□□□ -0.84
HMGCL-202ENST00000374487 BET1LQ9NYM9 111 aa9.83□□□□□ -0.84
HMGCL-202ENST00000374487 KAAG1Q9UBP8 84 aa9.83□□□□□ -0.84
HMGCL-202ENST00000374487 LSM4Q9Y4Z0 139 aaKnown RBP9.83□□□□□ -0.84
HMGCL-202ENST00000374487 H0YJW9 148 aa9.82□□□□□ -0.84
HMGCL-202ENST00000374487 PLAUP00749 431 aa9.82□□□□□ -0.84
HMGCL-202ENST00000374487 LOXP28300 417 aaPredicted RBP9.82□□□□□ -0.84
HMGCL-202ENST00000374487 UBE2G2P60604 165 aa9.82□□□□□ -0.84
HMGCL-202ENST00000374487 OR5AN1Q8NGI8 311 aa9.82□□□□□ -0.84
HMGCL-202ENST00000374487 TMEM186Q96B77 213 aa9.82□□□□□ -0.84
HMGCL-202ENST00000374487 CTDSP1Q9GZU7 261 aa9.82□□□□□ -0.84
HMGCL-202ENST00000374487 FABP9Q0Z7S8 132 aa9.82□□□□□ -0.84
HMGCL-202ENST00000374487 BSXQ3C1V8 233 aa9.82□□□□□ -0.84
HMGCL-202ENST00000374487 OR4C13Q8NGP0 309 aa9.82□□□□□ -0.84
HMGCL-202ENST00000374487 ANKHD1Q8IWZ3 2542 aaKnown RBP9.82□□□□□ -0.84
HMGCL-202ENST00000374487 UBE2CO00762 179 aa9.81□□□□□ -0.84
HMGCL-202ENST00000374487 PDE6DO43924 150 aa9.81□□□□□ -0.84
HMGCL-202ENST00000374487 NDUFS6O75380 124 aaKnown RBP9.81□□□□□ -0.84
HMGCL-202ENST00000374487 CXorf1O96002 111 aa9.81□□□□□ -0.84
HMGCL-202ENST00000374487 ARL14EPLP0DKL9 152 aa9.81□□□□□ -0.84
HMGCL-202ENST00000374487 RPL8P62917 257 aaKnown RBP9.81□□□□□ -0.84
HMGCL-202ENST00000374487 TMEM249Q2WGJ8 235 aa9.81□□□□□ -0.84
HMGCL-202ENST00000374487 MUC15Q8N387 334 aa9.81□□□□□ -0.84
HMGCL-202ENST00000374487 STPG3Q8N7X2 389 aa9.81□□□□□ -0.84
HMGCL-202ENST00000374487 FAM210BQ96KR6 192 aa9.81□□□□□ -0.84
HMGCL-202ENST00000374487 AKAP9Q99996 3911 aa9.81□□□□□ -0.84
HMGCL-202ENST00000374487 AP4M1O00189 453 aa9.81□□□□□ -0.84
HMGCL-202ENST00000374487 RPL29P47914 159 aaKnown RBP9.81□□□□□ -0.84
HMGCL-202ENST00000374487 ATP5IP56385 69 aaPredicted RBP9.81□□□□□ -0.84
HMGCL-202ENST00000374487 KIAA0141Q14154 515 aaPredicted RBP9.81□□□□□ -0.84
HMGCL-202ENST00000374487 SPNS3Q6ZMD2 512 aa9.81□□□□□ -0.84
HMGCL-202ENST00000374487 C8orf31Q8N9H6 132 aa9.81□□□□□ -0.84
HMGCL-202ENST00000374487 OR9G1Q8NH87 305 aa9.81□□□□□ -0.84
HMGCL-202ENST00000374487 NANPQ8TBE9 248 aa9.81□□□□□ -0.84
HMGCL-202ENST00000374487 ABHD5Q8WTS1 349 aa9.81□□□□□ -0.84
HMGCL-202ENST00000374487 C1orf159Q96HA4 380 aa9.81□□□□□ -0.84
HMGCL-202ENST00000374487 C12orf57Q99622 126 aa9.81□□□□□ -0.84
HMGCL-202ENST00000374487 METTL1Q9UBP6 276 aaKnown RBP9.81□□□□□ -0.84
HMGCL-202ENST00000374487 TET2Q6N021 2002 aaPredicted RBP9.8□□□□□ -0.84
HMGCL-202ENST00000374487 ZNF98A6NK75 572 aa9.8□□□□□ -0.84
HMGCL-202ENST00000374487 PCP4L1A6NKN8 68 aa9.8□□□□□ -0.84
HMGCL-202ENST00000374487 FNDC10F2Z333 226 aa9.8□□□□□ -0.84
HMGCL-202ENST00000374487 STAG3L2P0CL84 134 aa9.8□□□□□ -0.84
HMGCL-202ENST00000374487 STAG3L3P0CL85 134 aa9.8□□□□□ -0.84
HMGCL-202ENST00000374487 USF1P22415 310 aaPredicted RBP9.8□□□□□ -0.84
HMGCL-202ENST00000374487 RND2P52198 227 aa9.8□□□□□ -0.84
HMGCL-202ENST00000374487 RHOBP62745 196 aa9.8□□□□□ -0.84
HMGCL-202ENST00000374487 RPL23P62829 140 aaKnown RBP9.8□□□□□ -0.84
HMGCL-202ENST00000374487 ERHP84090 104 aaKnown RBP9.8□□□□□ -0.84
HMGCL-202ENST00000374487 DIAPH2-AS1Q14236 149 aa9.8□□□□□ -0.84
HMGCL-202ENST00000374487 TMEM155Q4W5P6 130 aa9.8□□□□□ -0.84
HMGCL-202ENST00000374487 TMEM177Q53S58 311 aa9.8□□□□□ -0.84
HMGCL-202ENST00000374487 FAM71F2Q6NXP2 309 aa9.8□□□□□ -0.84
HMGCL-202ENST00000374487 PDPNQ86YL7 162 aa9.8□□□□□ -0.84
HMGCL-202ENST00000374487 TGIF2LXQ8IUE1 241 aa9.8□□□□□ -0.84
HMGCL-202ENST00000374487 LINC00311Q8N616 119 aa9.8□□□□□ -0.84
HMGCL-202ENST00000374487 OR10W1Q8NGF6 305 aa9.8□□□□□ -0.84
HMGCL-202ENST00000374487 VSTM2AQ8TAG5 236 aa9.8□□□□□ -0.84
HMGCL-202ENST00000374487 AKAP6Q13023 2319 aa9.8□□□□□ -0.84
HMGCL-202ENST00000374487 NAV2Q8IVL1 2488 aa9.8□□□□□ -0.84
HMGCL-202ENST00000374487 LYNX1G3V0Z9 82 aa9.8□□□□□ -0.84
HMGCL-202ENST00000374487 IGHV1-8P0DP01 117 aa9.8□□□□□ -0.84
HMGCL-202ENST00000374487 LYNX1P0DP58 116 aa9.8□□□□□ -0.84
HMGCL-202ENST00000374487 ATP5G3P48201 142 aa9.8□□□□□ -0.84
HMGCL-202ENST00000374487 C2orf83Q53S99 150 aa9.8□□□□□ -0.84
HMGCL-202ENST00000374487 OR51G1Q8NGK1 321 aa9.8□□□□□ -0.84
HMGCL-202ENST00000374487 OR1L8Q8NGR8 309 aa9.8□□□□□ -0.84
HMGCL-202ENST00000374487 NABP2Q9BQ15 211 aa9.8□□□□□ -0.84
HMGCL-202ENST00000374487 SEPSECSQ9HD40 501 aaKnown RBP9.8□□□□□ -0.84
HMGCL-202ENST00000374487 WASHC3Q9Y3C0 194 aa9.8□□□□□ -0.84
HMGCL-202ENST00000374487 MAST4O15021 2626 aa9.79□□□□□ -0.84
HMGCL-202ENST00000374487 VPS13CQ709C8 3753 aa9.79□□□□□ -0.84
HMGCL-202ENST00000374487 TRBV23-1A0A0A0MS06 115 aa9.79□□□□□ -0.84
HMGCL-202ENST00000374487 IGHV2-5P01817 119 aa9.79□□□□□ -0.84
HMGCL-202ENST00000374487 S100PP25815 95 aa9.79□□□□□ -0.84
HMGCL-202ENST00000374487 IL3RAP26951 378 aa9.79□□□□□ -0.84
HMGCL-202ENST00000374487 DLX6P56179 175 aa9.79□□□□□ -0.84
HMGCL-202ENST00000374487 C16orf82Q7Z2V1 217 aa9.79□□□□□ -0.84
HMGCL-202ENST00000374487 TMEM144Q7Z5S9 345 aa9.79□□□□□ -0.84
HMGCL-202ENST00000374487 ZNF596Q8TC21 504 aa9.79□□□□□ -0.84
HMGCL-202ENST00000374487 SSX3Q99909 188 aa9.79□□□□□ -0.84
HMGCL-202ENST00000374487 NDUFA4L2Q9NRX3 87 aa9.79□□□□□ -0.84
HMGCL-202ENST00000374487 ABCA4P78363 2273 aa9.79□□□□□ -0.84
HMGCL-202ENST00000374487 F6UZH7 168 aa9.78□□□□□ -0.84
HMGCL-202ENST00000374487 H7BYZ3 331 aa9.78□□□□□ -0.84
HMGCL-202ENST00000374487 ENSAO43768 121 aaKnown RBP9.78□□□□□ -0.84
HMGCL-202ENST00000374487 NDUFB4O95168 129 aa9.78□□□□□ -0.84
HMGCL-202ENST00000374487 VENTXO95231 258 aa9.78□□□□□ -0.84
HMGCL-202ENST00000374487 MT-CO2P00403 227 aa9.78□□□□□ -0.84
HMGCL-202ENST00000374487 S100A9P06702 114 aaKnown RBP9.78□□□□□ -0.84
HMGCL-202ENST00000374487 COL8A2P25067 703 aa9.78□□□□□ -0.84
HMGCL-202ENST00000374487 MC5RP33032 325 aa9.78□□□□□ -0.84
HMGCL-202ENST00000374487 MEOX2P50222 304 aa9.78□□□□□ -0.84
HMGCL-202ENST00000374487 OR5T1Q8NG75 326 aa9.78□□□□□ -0.84
HMGCL-202ENST00000374487 OR4A5Q8NH83 315 aa9.78□□□□□ -0.84
HMGCL-202ENST00000374487 ST6GALNAC6Q969X2 333 aa9.78□□□□□ -0.84
HMGCL-202ENST00000374487 OR5B12Q96R08 314 aa9.78□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 71.2 ms